tmem115 (LOC106572260)


Basic Information

Item Value
gene id tmem115
gene name LOC106572260
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 41158079 ~ 41164529 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615703.2
GTGAAAGTGACTTGAAGTGGAATCGTGTCGTTTTTTTGCGTTTCTGCCATTCAGAGTGAGCGTGCGCTCTGCACCACACGCCTGAGGACAATACCTGTGTTTTGATTTCCTCTCCGGAGCAGGGCCCTGTTGAAAGGACTGATAACTGGAGAGGCGTTAAGTGTTGAGCAGGGTCAACTGAAGTTGAAGATTCCCATTGTCTGTGACGCCCAATGTTTGTTGCGATGCAGATCCGGTGAAGAGCGTGGTGAAACAGAGAAGACACTGTCTGTACTATTGGGTTTTGATGCAGAGTCTAAAGTCAAGTTAGGATTTGTCAGTTATCCCGTGAGAGCTTTTGTCCCAAACCCATTATGGTGTTttaggtgtcaagcttatggtcatgtggcagcagtgtgtaggagggagaatcctaggtgtgagaagtgtgcaggaggacTTTAGACATAGGTATGTGTAGTATCTTTGGAAAACGTTGTATGTTTAACTGTAGGGGTACCCACATGGTGCTGGAGATCAGAGGTGTCCAGGGAGAGAaaggcaggttgaggttgccaGCATCAGAGTAGTACAGAAGGTGTAGTATGCTGAGGCAGGGAAGAGAAtagtagaggaagatggatgAGGGATCCTGGACCAAAAAAAAGGAAAGggaacctagtcagttgtccaactgaatgtattcaactgaaatgtgacttacgcatttaacccaacccctctgaaatcAGTAGAGTGGTAGGAATAGCATGTGCTTcagtatgtttgtttttttgggcATTCATAGCCATGGTGATCAACTGTACCGCAGGAATGGAATGAAAATCACAGaggatagatgttgtggtggcagctgtaagagaagtacttgggtgtacGAGATTTTACTGTAGAAGAGTTACAAGGTGATTTAAACAATAGTGTCCCGTCCTCTTAGGCTGCTTTCCTGGTGCAGGATCAAATGGGGCcaaagtagtggaatagtggtgaggttttaatgggtgtagggttagttggttgGGCAATTTTTTTCACATAGTGTAATGAATTCATACTACATGATAGTAGGCTGATGCAGAGTCAATACAGTAGGTGGTGGCATGCACCTATAATATTTATTTGCGGCCCTCCATAATGAAGAAGAAGttaaaaagaataataataataataacaactgtTTCCCATAGTGCTCCAGTGCACCACGCTGGCGTGACTTGACGCTTTGTGTGTTGGTGACGGTGGCAGTGAGCCCAAGACTCgttttttggtcagtgtgtgtgaagtGCTGGATTGCCAGTCATCTGTGATTTTATATCGGAATAACGTTGACGTAACCGAATAGGCTCTGACATTGTGAAGACGTCATGGATTTCGCGTGAATCTCCGATTTTTGATCACCTCGACAACATTGTTTTGAAGGCCTGTAGCTACTGCTAACTAACGTTACAGGAAAAACTCGAGCTACTGTGGCTAGCTAGCGGTGAATCCTGGGCCGAGGAAAACAAGTGAGGCGCTGGTGCTAATTGTTGTCGTTTTTGGAGTTATACTACTCAAACCCTTTAATCGTCTTATGAATTCGAATGGTGGATATAAAACATCGTAACAAACTGTCAGACTTCTTTCCCTAGCCATTTAATAGCAACTTAGCAATAACAAGCTAACTAACTTAGCTTATTAGCTACTTATTCCAGCGCTTGCTAGCAAGCCAGCTAATGCTGAAGTATtaatttagccagctagctagctggttgaAGTTCTTGGTATGATTTCTAAAGTACAGTAACTATTTAATATTTGTGATGTATGTAAGCTTCGAGTATGACACCGTTTGGTGTCAATTGAGAGTAATTCACAGGTTGCtacatatgttagcttagtaaatTAGCCCAGTTACCTACTCTTAATATCTAATCACACTAGTAAGTTCAGTTCGGCAACTATAAAGGGTTATAGCGAGGTAGCAAAGTTTCCCCATCAAGTGTTTTTGAACAGCAATACCATTAAAGGTTCATTTAAACCACCCATTAGCATTGATCAGTCAGATTCTTTCCCCTATGAAGCATCATTGTCGAGAGTGGATGTTGTCTGTATCAGCAGATTACGTTTGTTCTTCTTGGCACTGCTGATTAACGGCCAACACGTGAGCAGCTGCAGGTCATACAAACTTACTGATCGGCCCTTGCGCGATACTGACAAAAGACACAATGAATCGCTATCTGCCAGTTGCACGACAGCACTTCTTGGGTGCATTAACCAACACTAGCGTTGTGGTGAAGTCCATAAGTGCCATAGTGCTACTTCTGTATCTGCTCTCGTGGGCAGTTGACACTCCATACGCCCTGGGTGTGACGCCTGGCTACCTCTTCCCCCCTAACTTCTGGATCTGGACCCTGGTGACCCATGCTGTGGTGGAGCAGCATGTGTGGGGATTGGTGGCCAATGTTGGGACTGTCATGGCCTGTGGCCGGCTGTTGGAGCCTCTGTGGGGCGCCTTGGAGCTGCTAATCTTTTTTGCCGTGGTCAACATCTCTGCAGGCCTCCTGGCGGGCCTCTCCTACTTGCTCACGTACGTCGCCACCTTTGACCTGGACTACTTGTTTGCTGTGCGAGTCCATGGGGCACCAGCTTTCCTCGGGGGGGTGTTGGTGGCCCTCAAGCAGACCATGGGGGACACGACTGTGCTGCGGGTTCCACAGGTGAGGCTCAAAGCGTCCCCGGCGCTGGTCCTCCTCTGCCTGGCCCTGCTACGCCTCTCTGGCCTGCTGGAGAATGCCGCACCACTGGCGGCCTACAGCTTTGGCGCCCTGGCAGGCTGGGTCTACCTGCGCTTCTACCAGAGGCACAGCCGGGGCCGTGGGGACATGTCAGACCACTTTGCCTTTGCCTCCTTCTTCCCTGAAGCGGTGCAGCCAGTGGTGGGGCTGCTGGCCGGCCTGGTGCACGCAGCCCTGGTGAAGATCAAGGTGTGCAGGAAGATGGTGAAGCGCTATGACGTCGGGGCACCTTCCTCCATCACCATCAGTCTGCCGGGGGTGGATCCCCAggacacagagaggaggagGCAGTTGGCGCTGAAGGCCCTGAACGAGCGACTGAAGAAGGTGGAGGACCAGTCGGCCTGGCCGAGCATGGACGACGAAGAGGACGACGATGAGGACGAGGTTCGGGCCGACACCCCGCTGCTCTCTGGACATGAGAGAACCTCGCCAGTAGGGGGGTCTAATGGTTCCCAGAACACCACGGGACAGGAGTCCAGCATCATCAGCTTTGAGGACGCCCCCTCCAGCTCATAACAGACACACTGATACACTCAGCTATACTAAGTTTTGAATAGCACACACACTAGTGactacaccccccacccccacacacacacacacacacactagctctaGCAGTTTTTGACACATTGTCAGGCTTATCAGTTTTTCGCTCTGACTCGCCGAAGTTGTACACAGATTGCTCTCCTGGCCCCACCCGCATATGTCCATTGAAACATGAATGCAATGTACAAACACCTTGGACTCTCCCTAGTTTGTCACGTCTCTCCTGAATAAACTATTGAATGGTTgtacaaaatgtttttttaattacAGCTCTTTTGACCCGAGACGCCTGCTCCACACCTGCTGCTCTCGTCTGACTCCCAGACCTTGTGTCTGAGACGCTACGACCGGAGCAGAGACTCTTGGCAAACTCTCCATCTGTTGCTGTGTGTTGCTATTGTCCCAGAGCAAGCTTTCAGCAGACGGATGCAGATTCTCAATGGTTTTCTAGGTCATCCTTTTGTGCTGATTGGTGTTTAGTCTTTAATGTCTTTGAcatcttttctctcttctccatcaCTGAAAGACAGTTATGGCCAAATATATATTGACACACTtgcacttttcttaaataattccCTAATACttctaaaataaattaaaaacaaacaaacagtaaccACACACTGTATTTTTGACATTGCAGAACCAATTTAGCTTATTTATCATTTTAGTTTAGTCCACCAACTGCGGTTTTCAGATCTCGCCAATACGTTTTTGATATGACTTTGCTGGCCACTTCAGAACAGTCCAGCATCTCTTCTTAACCATTCCTGGATGctttttgatgtgtgtgtgtgggggggggggggggggggggggttgttgttgtcctgctggaagacccacAGCCTTCAGTGGAGACACATTTTCTGGACACTGGGTTCAACACTGGACTCCAAAACACCTGATAATCTGCTAATTTCAAGCAACCCCACAGCATTACCAAACCCCCCCCATCTTTGATTGTAGGGAGGGTGTTATTTTCAttgaaataataaataatttgTCAGTAAACCCAAATCTGTATTGCCAAAGAGTTCCGATTTTGATTCATTGGTCCACAGAACCTTTTCCCCAGGATTTAGGCTTGTTTAGGTGGGTTTTTGAGAAATTCAAACAGGCTTTTTTTGTCTCCAGCAGTGGGGTCTTCCTATGTTTACTAACAACCAAATTAGGCATTCAAAGAAAATAACACCCTCCCTAAAATCAACCATGGGGAGGTTTGATAATGCTGTagggttgctttgctgcctctgGCAGTGCAGGACATCAGGAAATCTGCAGATTATCAAGGTGCTTTGGAGTGCAATGTTCAACCAGGTGTCTTTGTCAAAGGTTGTGGATCTTCCAGTAGGACAACAACCACAAACACGCATAAAAAGCACCCTGGACTGTTCTAATAGTCAGTGAAGGGTCCAGATCTGAATCACATCTGTGACGATCCATCTATGGCGAGACAGGGCACTTCTCAAACATTGAAGAATAAGAGCAATTTGTTGCTGAAGAGTGGGCCAAATTGCCAGGAGAAAATGTACAGAAAGCTTATTGATGGCTACAGGAAGCATTTGTTGGAACTACTAGCTCCTTTGTTGGAGTACTAGCTCctgggtgccaataattttgttCATGccatttgtctttattttctaaaTTAAAATTGTAAACTTAAGTTTGCAAAAATAAAACTGGGTCTGCAATGTGGAAAATCCAATAACAATTGTGTGGAGACCAAACTTTTTTTTACTATTTCAACTTATTTTAGAAGGGTGTCAATATATTTGGCAACAACTGTAGGTCTAGATTTGACCCCCCAGCTATTTTACCacagctagatcttctgttttCAAATGTTTCCAACATTTATGGGGCACCTGATAATTGGACAAGTTGCTCtgtggatgatgatgatgatgtggttgtttattgtttatttttgcTCTGAAGTCAGAGTTGGATTACTCGAAGGGGAACCATGGCCATAATAGATTGAAGGTGTGTGGGTCTATCTTCCTTTTTGTTCATACTGTTGATTTGTGTTCTGTCAGAATCTTTAGTTTTTCTGGCCAGCCAGTTTAATTTAGTTTCTTTTTACCCGAATGAGTGTGTAACAGGGAGAGCTAGAAGACTAGATGTTGTACACAGTGGTTTCCGGTCATTTCTGAATGGTTCTGGCCTGACAAAGTTCAGCAGCTTTTGACAATGACGGAACAATACAGCCACTGATGCAGGCTCTCTTCTCCCCAGGGAACATCTTGTCGAAATCTCTTGCTCTTTGTTTCTTTCTAGTTTCTCATTTTTTCCCCACTATCTGTGTCACGTCTCTCTTGAGTCTTTAAATCAAATAACTTATTTATGAGGTTTGAAATGTTAAGGTGTGGTGAAGGATGCCAATATGGATGCAGTTCTGTTTAATTTGTTGGGGAAGGTGAAGGGGGCCCAAGGATTGGTTCTGACGCCGTTCTGTTTAATTTGTTGGTGAAGGTGGCCCAAGGATTGGTTCTGACGCAGTTCTGTTTAATTTGTTGGTGAAGGTGGCCCAAGGATTGGTTCTGACGCAGTTCTGTTTAATTTGTTGGTGAAGGTGGCCCAAGGATTGGTTCTGACGCCGTTCTGTTTAATTTGTTGGGGAAGGTGCCTCGAAGCTTGGTTTTCACAGATTTTCCATGCACCAGACAGGTTCCTCAGATTTCCACTAACGATGTGTTTCTCTTTGTACTGTGACCGTTGCGCAGACTCCTATTTAGTTTCAgatatttctctgtctctatattaaATAAAATACGATTGTATGAAATGTAA

Function

NR:

description
transmembrane protein 115-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615703.2 True 6128 mRNA 0.46 2 41158079 41164529

Neighbor

gene id symbol gene type direction distance location
rhoab LOC106572261 coding downstream 10349 41141767 ~ 41147730 (-)
sema3h LOC106572304 coding downstream 30708 41098740 ~ 41127371 (-)
borcs6 LOC106572262 coding downstream 62090 41089018 ~ 41095989 (-)
xpc xpc coding downstream 104972 41041299 ~ 41053107 (-)
arih2 arih2 coding downstream 123677 41026250 ~ 41034402 (-)
LOC110532095 LOC106572303 coding upstream 2699 41167228 ~ 41237253 (-)
LOC110532099 LOC106572257 coding upstream 300130 41464659 ~ 41491370 (-)
LOC110532102 LOC106572255 coding upstream 478653 41643182 ~ 41665512 (-)
LOC110532103 mapre1 coding upstream 508158 41672687 ~ 41681390 (-)
LOC110532104 LOC106572254 coding upstream 529393 41693922 ~ 41756792 (-)
G804407 NA non-coding downstream 25329 41132524 ~ 41132750 (-)
G804355 NA non-coding downstream 120540 41037064 ~ 41037539 (-)
G804354 NA non-coding downstream 121996 41035820 ~ 41036083 (-)
G804353 NA non-coding downstream 122302 41035572 ~ 41035777 (-)
G804269 NA non-coding downstream 147254 41010051 ~ 41010825 (-)
G804423 NA non-coding upstream 14315 41178844 ~ 41179405 (-)
G804425 NA non-coding upstream 22753 41187282 ~ 41187525 (-)
G804470 NA non-coding upstream 131420 41295949 ~ 41370370 (-)
G804548 NA non-coding upstream 280903 41445432 ~ 41445637 (-)
G804549 NA non-coding upstream 281180 41445709 ~ 41445911 (-)
G804255 NA other downstream 172834 40984482 ~ 40985245 (-)
wdr6 wdr6 other downstream 242105 40904738 ~ 40916073 (-)
G804307 NA other downstream 245721 40862589 ~ 40912358 (-)
G804137 LOC106572278 other downstream 584129 40571014 ~ 40573950 (-)
selenok selenok other downstream 708139 40395732 ~ 40450018 (-)
G804543 LOC106572259 other upstream 272501 41437030 ~ 41437971 (-)
LOC110532119 LOC106572245 other upstream 963323 42125255 ~ 42141613 (-)
G806724 LOC106572208 other upstream 2167401 43331930 ~ 43339589 (-)
prdm16 prdm16 other upstream 2776037 43781726 ~ 44015554 (-)
tafa5l LOC106572193 other upstream 3084269 44247091 ~ 44292397 (-)

Expression


Co-expression Network