Gene
RNA
| Item | Value |
|---|---|
| gene id | tmem115 |
| gene name | LOC106572260 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 41158079 ~ 41164529 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protein 115-like |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021615703.2 | True | 6128 | mRNA | 0.46 | 2 | 41158079 | 41164529 |
41,156,000
41,157,000
41,158,000
41,159,000
41,160,000
41,161,000
41,162,000
41,163,000
41,164,000
41,165,000
41,166,000
41,167,000
41,168,000
41,169,000
41,170,000
41,171,000
41,172,000
41,173,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rhoab | LOC106572261 | coding | downstream | 10349 | 41141767 ~ 41147730 (-) |
| sema3h | LOC106572304 | coding | downstream | 30708 | 41098740 ~ 41127371 (-) |
| borcs6 | LOC106572262 | coding | downstream | 62090 | 41089018 ~ 41095989 (-) |
| xpc | xpc | coding | downstream | 104972 | 41041299 ~ 41053107 (-) |
| arih2 | arih2 | coding | downstream | 123677 | 41026250 ~ 41034402 (-) |
| LOC110532095 | LOC106572303 | coding | upstream | 2699 | 41167228 ~ 41237253 (-) |
| LOC110532099 | LOC106572257 | coding | upstream | 300130 | 41464659 ~ 41491370 (-) |
| LOC110532102 | LOC106572255 | coding | upstream | 478653 | 41643182 ~ 41665512 (-) |
| LOC110532103 | mapre1 | coding | upstream | 508158 | 41672687 ~ 41681390 (-) |
| LOC110532104 | LOC106572254 | coding | upstream | 529393 | 41693922 ~ 41756792 (-) |
| G804407 | NA | non-coding | downstream | 25329 | 41132524 ~ 41132750 (-) |
| G804355 | NA | non-coding | downstream | 120540 | 41037064 ~ 41037539 (-) |
| G804354 | NA | non-coding | downstream | 121996 | 41035820 ~ 41036083 (-) |
| G804353 | NA | non-coding | downstream | 122302 | 41035572 ~ 41035777 (-) |
| G804269 | NA | non-coding | downstream | 147254 | 41010051 ~ 41010825 (-) |
| G804423 | NA | non-coding | upstream | 14315 | 41178844 ~ 41179405 (-) |
| G804425 | NA | non-coding | upstream | 22753 | 41187282 ~ 41187525 (-) |
| G804470 | NA | non-coding | upstream | 131420 | 41295949 ~ 41370370 (-) |
| G804548 | NA | non-coding | upstream | 280903 | 41445432 ~ 41445637 (-) |
| G804549 | NA | non-coding | upstream | 281180 | 41445709 ~ 41445911 (-) |
| G804255 | NA | other | downstream | 172834 | 40984482 ~ 40985245 (-) |
| wdr6 | wdr6 | other | downstream | 242105 | 40904738 ~ 40916073 (-) |
| G804307 | NA | other | downstream | 245721 | 40862589 ~ 40912358 (-) |
| G804137 | LOC106572278 | other | downstream | 584129 | 40571014 ~ 40573950 (-) |
| selenok | selenok | other | downstream | 708139 | 40395732 ~ 40450018 (-) |
| G804543 | LOC106572259 | other | upstream | 272501 | 41437030 ~ 41437971 (-) |
| LOC110532119 | LOC106572245 | other | upstream | 963323 | 42125255 ~ 42141613 (-) |
| G806724 | LOC106572208 | other | upstream | 2167401 | 43331930 ~ 43339589 (-) |
| prdm16 | prdm16 | other | upstream | 2776037 | 43781726 ~ 44015554 (-) |
| tafa5l | LOC106572193 | other | upstream | 3084269 | 44247091 ~ 44292397 (-) |
