XLOC_026706 (il4r.1)


Basic Information

Item Value
gene id XLOC_026706
gene name il4r.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 44048907 ~ 44060037 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052003
cgggcgcgagcAGGTCTGGAGTCAGTGGAACAGCTGCGCGTCCGCGTGTCTTCCAGGAAACTTCGATACGCCCTTTTAAATGAAGTTCAATGTTTCGTTTGCGAATAGGGAAGCAGCCAGCAGACTGAAATTTCCACATTTTGAACTGGTCGTCTGGACGTTTTGTGTGAGACAGAGAAGCAAATTAAGTTTCTTATGTTTTACTTCGCGAACGAGGAAACCTATAGGATATAGGATGTCTTCCTCATTATTTCTTTACCAGATCATCCTCACACTCGTCTGCCAAGCACTTTGTGACGATCCCATTAAGGACTTCAATTGTTTTAATGACTACGAGGCCGAGATGACGTGCAGTTTCTCTTCTGAAAGTCTCAGAAATTGTTCTGGATACAATATGAACGTCACACAAAAACTAGCATATGAGATAAATAGGTATTCATGCGTCTTTGAGAGAAGTCATCACAATGCCATTTGTGAATGCAAAATTGAAGTGGAAGGCTTTATTACTGAAGAGATCTTCTCCACTACACTTCTCAAGGGAACAAAGGTTTTATTACAAAGGGATTTCAAGACTATAGATTATATCAAACCAAAAACTCCAGTGTTATTTGTGAAGAAGACAGAAAATGGAAACTTTCATGTTACCTGGGTTGATAGCTATGAACAAAGGAATGTCTTTACAGATAATTTGTTTATAACTCTGACCTATAGGATCAAAGGAGAAATTGAAACAAATTCCACAAAGGTGGCAAACACTGTTGGATTCTGTGATATCGTGGGCAGTCTTCTCCAGCCAAAAACTGAATACATTCTGACAGCAAAAATGAGCTCGAACTACAACGGTCAGAAGATATATAGTGATCAGAGTGCAGCAGTTCATTTCACCACTGCTCCATTACCTAATGAAATAGTCAAACTGGTGGTTCCACCATTGTGTATTGGTTTACTCATCATCATTTGTATGACCTTCATCTGTTTTTTGAGGATGAAGTCAAATTGGTGGGACAAGATCGCCAAGCCAACAATTAAAGACAATTTTGGAAATAAGAAGtgtttcgaaacacttgcgcttcgggatctcgacactgtgtcgaaacgtcagtttcatgtcagccatccctacaaaaagattaaaatacggATCTCACCAGTATGTGTGAACCCAAACAACGAGAGAAGTTCTCACAGTGTTGAATCATCACCAGGGGATTATGGCCAGGCCGTCTGTGATTCTGGTAGCAATCCGGTGCAAGACATCCGATCACAACTTGAATTCGCAATAGCTCAAGATAATTTACGGTTGAAATGGAACACACCACTCAACCAGTTCACTGAGATGCCATACAACAGTGTGGAGTCTTCTTCAAAGGAAAGGAATCGTGCTAACAGAGATTCGGGGACCTGCTCGGGTTCATCGGTTTTCAGCAACAAGTCATATTTGGAAGGAACCACTGATGATTCTTCATTTTTGGACCTGAACTGTGATCATTCTGATGATAGAAAAGTCTCAGACTCCATATTTAAGCTGGAAAACTCTATTGATATCATTAAGAGCCTGCAGAACTTTCCTGATGAAGGATATCAGGCTTTCAGTGCTGTTGTGGAAAAGAGAGATGTTGTAGATGGTTGTGCGAAACTTTCCTCTAATGTTGATGCAGACGACAATGTGATCAGGCAAAATCTAATCACCAGTGCCAATCCACTGTATTCTCCTCTGTTACATCATGATCACACAATCGCAAGGGATGATCCCTATAAAGCTTTTCAAGACGTATCAAAAAACACGGGGGGACAATGGAGCACGAGCATCAGCACTGAGCGAACACTTAATGAATGTGGAGCTCTGAAATTCCCTCACATCGCCGGCCAAACAGCCCTGTTACAGAACACTGCTTGGGACTTTTTGAATATCCCACCGACTGTTGAAATAGACCTTTCATATCACGCTGTCTAACTGTGTCGCACATAAGTAAAACATTTCAGTCTCTTTGCATATAACCTCTGGAGTCGCAATGAATCATCCTCCAATTTTCCAAACCACACACCCTCTTTGTGGATGACG
>TCONS_00052004
ACATTTTGAACTGGTCGTCTGGACGTTTTGTGTGAGACAGAGAAGCAAATTAAGTTTCTTATGTTTTACTTCGCGAACGAGGAAACCTATAGGATATAGGATGTCTTCCTCATTATTTCTTTACCAGATCATCCTCACACTCGTCTGCCAAGCACTTTGTGACGATCCCATTAAGGACTTCAATTGTTTTAATGACTACGAGGCCGAGATGACGTGCAGTTTCTCTTCTGAAAGTCTCAGAAATTGTTCTGGATACAATATGAACGTCACACAAAAACTAGCATATGAGATAAATAGGTATTCATGCGTCTTTGAGAGAAGTCATCACAATGCCATTTGTGAATGCAAAATTGAAGTGGAAGGCTTTATTACTGAAGAGATCTTCTCCACTACACTTCTCAAGGGAACAAAGGTTTTATTACAAAGGGATTTCAAGACTATAGATTATATCAAACCAAAAACTCCAGTGTTATTTGTGAAGAAGACAGAAAATGGAAACTTTCATGTTACCTGGGTTGATAGCTATGAACAAAGGAATGTCTTTACAGATAATTTGTTTATAACTCTGACCTATAGGATCAAAGGAGAAATTGAAACAAATTCCACAAAGGTGGCAAACACTGTTGGATTCTGTGATATCGTGGGCAGTCTTCTCCAGCCAAAAACTGAATACATTCTGACAGCAAAAATGAGCTCGAACTACAACGGTCAGAAGATATATAGTGATCAGAGTGCAGCAGTTCATTTCACCACTGCTCCATTACCTAATGAAATAGTCAAACTGGTGGTTCCACCATTGTGTATTGGTTTACTCATCATCATTTGTATGACCTTCATCTGTTTTTTGAGGATGAAGTCAAATTGGTGGGACAAGATCGCCAAGCCAACAATTAAAGACAATTTTGGAAATAAGAAGGGTCAAGTTTTGCCTCCTTCCTCCAATGCAGTCTACCCAAACCAAGTTGAGGTTATTAATCTAGACTTCGAGGAGGAAAAGAAAtcgATCTCACCAGTATGTGTGAACCCAAACAACGAGAGAAGTTCTCACAGTGTTGAATCATCACCAGGGGATTATGGCCAGGCCGTCTGTGATTCTGGTAGCAATCCGGTGCAAGACATCCGATCACAACTTGAATTCGCAATAGCTCAAGATAATTTACGGTTGAAATGGAACACACCACTCAACCAGTTCACTGAGATGCCATACAACAGTGTGGAGTCTTCTTCAAAGGAAAGGAATCGTGCTAACAGAGATTCGGGGACCTGCTCGGGTTCATCGGTTTTCAGCAACAAGTCATATTTGGAAGGAACCACTGATGATTCTTCATTTTTGGACCTGAACTGTGATCATTCTGATGATAGAAAAGTCTCAGACTCCATATTTAAGCTGGAAAACTCTATTGATATCATTAAGAGCCTGCAGAACTTTCCTGATGAAGGATATCAGGCTTTCAGTGCTGTTGTGGAAAAGAGAGATGTTGTAGATGGTTGTGCGAAACTTTCCTCTAATGTTGATGCAGACGACAATGTGATCAGGCAAAATCTAATCACCAGTGCCAATCCACTGTATTCTCCTCTGTTACATCATGATCACACAATCGCAAGGGATGATCCCTATAAAGCTTTTCAAGACGTATCAAAAAACACGGGGGGACAATGGAGCACGAGCATCAGCACTGAGCGAACACTTAATGAATGTGGAGCTCTGAAATTCCCTCACATCGCCGGCCAAACAGCCCTGTTACAGAACACTGCTTGGGACTTTTTGAATATCCCACCGACTGTTGAAATAGACCTTTCATATCACGCTGTCTAACTGTGTCGCACATAAGTAAAACATTTCAGTCTCTTTGC
>TCONS_00052005
cgggcgcgagcAGGTCTGGAGTCAGTGGAACAGCTGCGCGTCCGCGTGTCTTCCAGGAAACTTCGATACGCCCTTTTAAATGAAGTTCAATGTTTCGTTTGCGAATAGGGAAGCAGCCAGCAGACTGAAATTTCCACATTTTGAACTGGTCGTCTGGACGTTTTGTGTGAGACAGAGAAGCAAATTAAGTTTCTTATGTTTTACTTCGCGAACGAGGAAACCTATAGGATATAGGATGTCTTCCTCATTATTTCTTTACCAGATCATCCTCACACTCGTCTGCCAAGCACTTTGTGACGATCCCATTAAGGACTTCAATTGTTTTAATGACTACGAGGCCGAGATGACGTGCAGTTTCTCTTCTGAAAGTCTCAGAAATTGTTCTGGATACAATATGAACGTCACACAAAAACTAGCATATGAGATAAATAGGTATTCATGCGTCTTTGAGAGAAGTCATCACAATGCCATTTGTGAATGCAAAATTGAAGTGGAAGGCTTTATTACTGAAGAGATCTTCTCCACTACACTTCTCAAGGGAACAAAGGTTTTATTACAAAGGGATTTCAAGACTATAGATTATATCAAACCAAAAACTCCAGTGTTATTTGTGAAGAAGACAGAAAATGGAAACTTTCATGTTACCTGGGTTGATAGCTATGAACAAAGGAATGTCTTTACAGATAATTTGTTTATAACTCTGACCTATAGGATCAAAGGAGAAATTGAAACAAATTCCACAAAGGTGGCAAACACTGTTGGATTCTGTGATATCGTGGGCAGTCTTCTCCAGCCAAAAACTGAATACATTCTGACAGCAAAAATGAGCTCGAACTACAACGGTCAGAAGATATATAGTGATCAGAGTGCAGCAGTTCATTTCACCACTGGATTGTAAGCGCAACAGCAGGTGTTCCTTGCAGAAAGCATCCATCTGATGGACACTTATTCTGAAATTTGTCGTATGTCTCTATAAGTGTTAAATGTGAAATGTCATTTGTTTTGAGTATATCTAATTGCAATATTTGGTCATAGTCATCTGTTATTTGTTCCAGAGAAAACAGATTTGACTGTATTATTACTGATTTATTACTTTGTATGCATTAAGCTTATTGCTATATGAAAACGCAGCCATTGTTTTTTCGACTGATTTGCTTAGAATTGTTATGTTGTTAAATGTTATTGCTCAATAAAGGTAATTTTtatatgaattacagtatcattAAATAAAAGTACTTTCTCTTGCAAAA

Function

symbol description
il4r.1 Enables interleukin-4 binding activity. Acts upstream of or within neurogenesis and regeneration. Located in plasma membrane. Is expressed in several structures, including digestive system; gill; immune system; integument; and ovary. Human ortholog(s) of this gene implicated in several diseases, including acne; allergic conjunctivitis; autoimmune disease (multiple); human immunodeficiency virus infectious disease; and renal tuberculosis. Orthologous to human IL4R (interleukin 4 receptor).

GO:

id name namespace
GO:0002532 production of molecular mediator involved in inflammatory response biological_process
GO:0031099 regeneration biological_process
GO:0022008 neurogenesis biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004896 cytokine receptor activity molecular_function
GO:0019979 interleukin-4 binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050227-5 Enables interleukin-4 binding activity. Acts upstream of or within neurogenesis and regeneration. Located in plasma membrane. Is expressed in several structures, including digestive system; gill; immune system; integument; and ovary. Human ortholog(s) of this gene implicated in several diseases, including acne; allergic conjunctivitis; autoimmune disease (multiple); human immunodeficiency virus infectious disease; and renal tuberculosis. Orthologous to human IL4R (interleukin 4 receptor).

Ensembl:

ensembl_id ENSDARG00000102583

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052003 False 2062 mRNA 0.42 10 44048907 44060037
TCONS_00052004 False 1854 mRNA 0.41 10 44048977 44059902
TCONS_00052005 True 1250 mRNA 0.37 7 44055307 44060037

Neighbor

gene id symbol gene type direction distance location
XLOC_026705 il4r.2 coding downstream 36103 44002300 ~ 44012804 (-)
XLOC_026704 ubfd1 coding downstream 89034 43942032 ~ 43959873 (-)
XLOC_026703 BX682557.1 coding downstream 159464 43878456 ~ 43889443 (-)
XLOC_026702 BX682557.2 coding downstream 173778 43866785 ~ 43875129 (-)
XLOC_026701 mslna coding downstream 176018 43835558 ~ 43872889 (-)
XLOC_026707 kdm8 coding upstream 21583 44081620 ~ 44094451 (-)
XLOC_026708 NA coding upstream 51508 44111545 ~ 44124370 (-)
XLOC_026709 NA coding upstream 272710 44332747 ~ 44335853 (-)
XLOC_026710 hs3st4 coding upstream 481285 44541322 ~ 44753325 (-)
XLOC_026711 usp31 coding upstream 1135182 45195219 ~ 45250924 (-)
XLOC_026695 NA non-coding downstream 859822 43187194 ~ 43189085 (-)
XLOC_026694 NA non-coding downstream 1022172 43024821 ~ 43026735 (-)
XLOC_026691 CABZ01079183.1 non-coding downstream 1182707 42866083 ~ 42866200 (-)
XLOC_026716 NA non-coding upstream 1479749 45539786 ~ 45543451 (-)
XLOC_026719 NA non-coding upstream 1772040 45832077 ~ 45843700 (-)
XLOC_026722 NA non-coding upstream 2093090 46153127 ~ 46217473 (-)

Expression


Co-expression Network