Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966051 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 42297951 ~ 42299962 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053253.1 | True | 339 | mRNA | 0.54 | 2 | 42297951 | 42299962 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532125 | vps13d | coding | downstream | 8133 | 42263238 ~ 42289818 (-) |
| LOC110532120 | LOC106572241 | coding | downstream | 137377 | 42155085 ~ 42160574 (-) |
| LOC110532119 | LOC106572245 | coding | downstream | 156338 | 42125255 ~ 42141613 (-) |
| rnf207b | LOC106572244 | coding | downstream | 183586 | 42098270 ~ 42114365 (-) |
| LOC110533012 | LOC106572332 | coding | downstream | 210649 | 42085331 ~ 42087302 (-) |
| LOC110532126 | LOC106572238 | coding | upstream | 13526 | 42313488 ~ 42341574 (-) |
| LOC110532127 | LOC106572237 | coding | upstream | 45920 | 42345882 ~ 42404462 (-) |
| LOC110532130 | LOC106572235 | coding | upstream | 136805 | 42436767 ~ 42484817 (-) |
| LOC110532134 | LOC106572229 | coding | upstream | 265437 | 42565399 ~ 42570961 (-) |
| LOC110532137 | LOC106572227 | coding | upstream | 299323 | 42599285 ~ 42612476 (-) |
| G805571 | NA | non-coding | downstream | 4372 | 42292952 ~ 42293579 (-) |
| G805553 | NA | non-coding | downstream | 7798 | 42289826 ~ 42290153 (-) |
| G805569 | NA | non-coding | downstream | 10115 | 42287568 ~ 42287836 (-) |
| G805550 | NA | non-coding | downstream | 28899 | 42257552 ~ 42269052 (-) |
| G805538 | NA | non-coding | downstream | 60721 | 42236890 ~ 42237230 (-) |
| G805597 | NA | non-coding | upstream | 32215 | 42332177 ~ 42332438 (-) |
| G805848 | NA | non-coding | upstream | 98829 | 42398791 ~ 42399144 (-) |
| G805871 | NA | non-coding | upstream | 134439 | 42434401 ~ 42436590 (-) |
| G805878 | NA | non-coding | upstream | 157702 | 42457664 ~ 42457965 (-) |
| G805910 | NA | non-coding | upstream | 217131 | 42517093 ~ 42518787 (-) |
| G804543 | LOC106572259 | other | downstream | 859980 | 41437030 ~ 41437971 (-) |
| G804255 | NA | other | downstream | 1312706 | 40984482 ~ 40985245 (-) |
| wdr6 | wdr6 | other | downstream | 1381977 | 40904738 ~ 40916073 (-) |
| G804307 | NA | other | downstream | 1385593 | 40862589 ~ 40912358 (-) |
| G806724 | LOC106572208 | other | upstream | 1031968 | 43331930 ~ 43339589 (-) |
| prdm16 | prdm16 | other | upstream | 1640604 | 43781726 ~ 44015554 (-) |
| tafa5l | LOC106572193 | other | upstream | 1948836 | 44247091 ~ 44292397 (-) |
| G807941 | NA | other | upstream | 2061454 | 44361416 ~ 44362166 (-) |
| G808375 | NA | other | upstream | 2334597 | 44634559 ~ 44636846 (-) |
