glut1b (LOC106572233)


Basic Information

Item Value
gene id glut1b
gene name LOC106572233
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42496861 ~ 42529048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617145.2
TGACGTTCCAGCTGATGATGGCAGTGGGAACAGCTGTGATTGGCTCGCTGCAGTTTGGCTACAACACAGGGGTCATCAACGCTCCCCAAAAGATCATTGAAGGCTTTTTAAATGACACGTGGAACAACAGGTACTCTGAGCCCATCCCTGCCACATCCCTGACCACCCTGTGGTCCATCTCCGTGGCCATCTTCTCTGTCGGGGGCATCTTCGGCTCCTTCTCCGTGGGCCTCTTTGTCAACCGCCTGGGCAGGAGGAACTCGATGCTCATCGCCAATGTGCTAGCATTCATTGCCGCCGGGTTCATGGGCTTCTCCAAGCTGGCGGTGTCGTGGGAGATGCTGATCGTTGGCCGCTTCATCGTGGGACTTTACTCCGGCCTGTCCACTGGCTTCGTGCCCATGTACGTGGGGGAGATCGCGCCCACTTCGCTCCGTGGGGCGCTGGGCACTCTGCACCAGCTGGGAATCGTCATTGGAATCCTCATGGCACAGGTGTTTGGGATGGAGTCGATCATGGGGAACTCCACTATGTGGCCCTTCCTGCTGGGCCTCACTTTCATCCCGGCCGTGTTGCAGTGTATCCTGCTGCCCTTCTGCCCCGAGAGCCCTCGCTTCCTCCTCATCAACTGCAACGAGGAGCTCAAGGCCAGGGAAGTGCTGGAGAAGCTGCGAGGCACTGAGGAGGTGGGCGCCGACATGCAGGAGATGAAGGAGGAGGCCAGGCAGATGATGAGGGAGAAGAAAGTGACCATCCTGGAGCTATTCCGCTCGCCACTCTACCGCCAGCCCATCTTCATCGCCATCATGCTCCAGCTCTCCCAGCAGCTGTCTGGCATCAACGCTGTTTTCTACTACTCCACCAGGATCTTTGAGAAGGCGGGGGTTTCTCAGCCAGTCTATGCTACCATTGGGGCTGGGGTAGTCAATACAGCCTTCACTGTTGTGTCTCTATTCATTGTGGAGCGTGCTGGGCGAAGATCCCTTCACCTCACTGGGTTACTGGGGATGGCCTTCTCAGCGGTCCTGATGACAGTTGCCATGGCACTGCTGGACCAGCTGCCATGGATGTCGTACGTTAGCATCGTGGCCATCTTCAGCTTCGTGGCCTTCTTTGAGATTGGCCCAGGCCCCATCCCATGGTTCATTGTGGCTGAGCTCTTCAGCCAAGGTCCTCGGCCCTCTGCCTTTGCCGTGGCTGGATTCTCCAACTGGTCAGCTAACTTTATAGTGGGCATGACCTTCCAATACGTTGAGCAACTGTGTGGCCCCTACGTCTTCATCATCTTCACCGTGCTGTTGCTGGGCTTCTTCGTCTTCACCTACTTCATGGTGCCCGAAACCAAGGGACGATCGTTTGACGAGATCGCCGCTGGCTTCCGCCATGATGCCGGAGAGGCAGGGGAGAAGTATGCGCCTGACGAGATGAACAGCCTGGGGGGAGCCGACTCCCAGCTCTAAGCCCTCCGA
>TU916767
TAGCAGCAAGTCATGGGAGTCTATAACGGTCTACAAACGCAACATACAAGAAATAAGGAAAGACGGCATAATGAAACTGTATTAAGGAATTGTGTattttaaagtttttttaaaactttGATATCAATATTGAAAATGGCTTACGACGGTGTAGTAAGTAAGCCCTGTGGATTTTAGTTGCCTCTGAAGAGTTGTCCCGACAGACCTGCTTTCAACCATCGATCTACTTCACTGATCAAATATGGAAGGTGGAGGCAAGGGGGTGACGTTCCAGCTGATGATGGCAGTGGGAACAGCTGTGATTGGCTCGCTGCAGTTTGGCTACAACACAGGGGTCATCAACGCTCCCCAAAAGGTGAGTGAGAAAGGGACAGTTTCAAATGTCACCCTaatccctaaatagtgcactacttttgcccagtgCCATAGAGGCCCCGTATAGAGAATAAGGTGCAATTTTGGACACATACTCTGTTAGTTTCTATGTTTGTGCCCCTTAAAGCCTGTCCAAACCCAGTGAATGTAAAGACAGTATTCTTCCTATTCATTCTTGACACCTCTTACTAGCTCTGCAGGTTAAGATGTTCTCTCCATCAAGAGCCCCACCAGGTCAATCAACCGTGATACATAAAAAACATGTAGGATCTTTGACTGATGTGGTGAGACTCCCTGGTGAGATAAGAGGAGACGCAATCCTTCTACTGGTGTCGGATGTTGGAtttttagtttgacctgttttgTAGCAGGGGGGAAATAATCCTGTAGGAGGAGGATTTCAATGTCTGAATAAATATTTAGTATCGTCACCAGGGGGAAGCTGTGATTGTATACAATGCAATACCGTACCTACTCTCTTAGAAAAAATAACCTAAAacggttctttggctgtccctataggagaaccctttgaagaaccttttttggttccaggtagaacccttttgggttccatgtaaaaccatttccaagaagggttctacatgaaccctgtaagagttctacctggaaccaaaaaatagttctacctggaagcaaaagaggttctcctatggggacagctgaagaacccttttggatcccTTAGACTGCAGCTCCAGTTCAAGTAGCCAATGTAGGCTACATGCAGGCTACAGCGCGTCTCGTGTGAATTCTTATTCGGATTATAATAAATCCACATATTTCTAGGAAGTAAATGTATTTTTCGGTAGggaaaatcattttttaaaatgtgttttattatactgtatgttcaaGACAAGCAATGGGCAGAATAACTAATTTTCCAACATTGTTCTGTCTCTTCAATAAaagcaaaaaaaataacaaaggagTGGCACTGACCCAGtccttaaaatatatatttaaggaATAATAAATAATTGGACAAATAACAATTAGATTGGTAAGCTCACGtccaacctaaaacacaaaaataaaaaaataaaaaaataaattgaaTAAGGTAGGCTAAATTGATTCATAAAACATGTACAGACCAAGCAAGCAACAATATATGCTATGCTAACTGATTCCACCATTGAAAGAGAaaacaaacaaagaaatagaaaataaaCCGATATGCTGAGATTCAGGCTGGAGATTTTGAGGTGGAAAATAAAAACTTCAGAGGACTTTTAAACCTTGAATGCATGCTAGTTTGATTCACTCACTTAATGAGTGGAGTTCCACCAAAATATTGCAGTCAGGGTGCAAAATACCACAGCAGTTACtccacttttactgcagtttcaaaacggcAATCTTTTTTTGGAAGGGTTTAGATAGCCTACAGCCTATTTTAGGCCCACAAGGTAACTGCATTAATTTCAAGAAGTAAAATTAACTGTCTGATAATTTACACGTCAAAGAAAAGTGTCTCAGCTCAACAGAATTGTCTTTGGATAGGCTCAAATCCATAAACATCTTGACAGCTTTACAAAATCAGATATTAAAGCCCACAATAAGGCACATAATAGCTTAGCAATGGAAATCTCACCTGCTGTAAGGGCATCCACACCAAAGACCATAACTATATTGACAAATTATACAACGCCGAACTATAAAACGTGGgtaagcatccacactggaggaaagtttATTgttctacagtaggcctacatctgtCAATCAACTGATGACCAAATCGGCTCACCAACTCAGCCAGGGAAACACAAACaaagccctgtcgatgttaatgggggcctgttcagccctccttttcctatagtccacgaccagctcatttgtcttgctcacattgagggagaggatgttgtgctggcaccacactgccaggtctctgacctcctccctataggctgtctcatcattgtcagtgatcactgtcactgttgtgtcatcagcaaacttaatgatggtgttggagtcatgcttggccatgcagtcttgggtgaacagggagtacaggaggggactaagcacgcaccgcTGACG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617145.2 False 1469 mRNA 0.58 9 42517146 42529048
TU916767 True 2454 lncRNA 0.41 4 42496861 42519512
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110532129 LOC106572329 coding upstream 86093 42425082 ~ 42431053 (+)
LOC110532123 LOC106572239 coding upstream 270720 42237344 ~ 42246426 (+)
LOC110532122 LOC106572240 coding upstream 280507 42209835 ~ 42236639 (+)
LOC118966050 NA coding upstream 337825 42160412 ~ 42179321 (+)
LOC110532121 LOC106572248 coding upstream 392277 42118391 ~ 42124869 (+)
trappc6b trappc6b coding downstream 11973 42541021 ~ 42546531 (+)
tpx2 LOC106572230 coding downstream 17797 42546845 ~ 42556493 (+)
LOC110532135 LOC106566930 coding downstream 34360 42563408 ~ 42565334 (+)
LOC110532136 LOC106572228 coding downstream 42764 42571812 ~ 42596697 (+)
LOC110533013 LOC106566826 coding downstream 123084 42652132 ~ 42689483 (+)
G805673 NA non-coding upstream 59314 42457630 ~ 42457832 (+)
G805640 NA non-coding upstream 115515 42401314 ~ 42401631 (+)
G805638 NA non-coding upstream 118291 42398645 ~ 42398855 (+)
G805601 NA non-coding upstream 171307 42345601 ~ 42345839 (+)
G805423 NA non-coding upstream 226146 42289554 ~ 42291000 (+)
G805694 NA non-coding downstream 3334 42532382 ~ 42579499 (+)
G805749 NA non-coding downstream 85812 42614860 ~ 42615200 (+)
G805779 NA non-coding downstream 132767 42661815 ~ 42664451 (+)
G805781 NA non-coding downstream 136721 42665769 ~ 42665983 (+)
G805786 NA non-coding downstream 148488 42677536 ~ 42677836 (+)
G805600 NA other upstream 168360 42346176 ~ 42348786 (+)
G805451 NA other upstream 184708 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 492743 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 1081723 41423598 ~ 41452922 (+)
G803728 NA other upstream 1495644 41020936 ~ 41021502 (+)
G807677 NA other downstream 1666667 44195715 ~ 44196041 (+)
G807841 NA other downstream 1913614 44442662 ~ 44453077 (+)
G809685 NA other downstream 3605683 46134731 ~ 46135732 (+)
G812143 NA other downstream 5452953 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 6016406 48545454 ~ 48570593 (+)

Expression

glut1b(LOC106572233) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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glut1b(LOC106572233) Expression in each Bioproject

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glut1b(LOC106572233) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 175.
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Co-expression Network