LOC110532148 (LOC106572218)


Basic Information

Item Value
gene id LOC110532148
gene name LOC106572218
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 42912383 ~ 42930990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615791.2
GTCATCGTCTCACCGCTCGTGATTCGATGAGGATGTTGATACcacagaggaagaggcgaagcgagagagCTGACTCCGCCCCAAAAATCTGTCCGGCAATGGGAGTGTCGAATATGCACTGGATCTTACTTGTGCATCAGACTCGGTGGCTATTGTAGGCTATTTACTACATATTTTTGGGATTGAGATAACGTTCTAAAGATACTCTGATAAATGCCAAGTACTAATGTCCTGTCAAAAAATAAGAACGTTTAGCCATGCGTTATGGCAGACAAGTAAGTCAACGTCGCTTTGCAAAGTTTATGTGGCTTCTTGTGGTAGCGTGGCATCTACAGGTCCGACCACCCAAATAGGGAAATGCTGCGAAGATGAACAAAGTTGTGGATCAGATTTAGGTATCCAGCCTGTACGGTCCACAGCCATCCCAACTTCTCCATCACCCGCAAATCACAGACACGTAGCGAGCAACAACCAGAGGGTGTCGCCTACCTTGTCTGAAAGGGCATTCACTACAGAACTCCAGATTGACTCCAAGACTTACCTTTGGTCAAGGTATAATGAAATGAAACGGCTTGTGCACGATCTGATTCCTCCAGGTGTATGTAACTTACTGAACCCCTCCACCATCTATGCCAACAATGAGGTTGACTTGGACGAAGTGGACATCTATGGCTTTGATTATGACTACACACTCGCTCTGTACTCCAACACTCTTGATACAATGATCTACAACACAGCTCGAGACTTCCTTGTCAAGCACTACAAGTATCCAGAGGGCATTAGCAAGTATGACTATATTCCCAACTTCGCTGCACGGGGTCTCCACTATGACATTCAGAAGGGACTGTTGATGAAAATAGATGCCTTCCATTACATCCAGCTGGGGACTGTATACAGGGGTCTGAAGCCTGTTCCAGATCACGAGGTTTTGGAGCTCTATGGTGGAACTCACCATGTCCCTCTTCAGGAAGTCAGTGGCTTCTATGGAAAGGGTCCAATGATGAAGCAGTTCATGGATGTTTTCTCCATCCCAGAGATGACTCTCCTGGCAGCTGCCAATGACTACTTCAACTCCAATGACATTGAATATGACCCTGGTCATCTCTACAAAGATGTTTCGGATGCCATTGGAATGGTGCATATCAAAGGCTACATGTACAAGTGGATAATGCAAGACTTGGATAAATATATTCTCAGAGGAGATGAGACATATGCAGTTCTGCACCGTCTGGCCAGCCATGGCAAGAAGCTCTTCCTTATAACCAACAGCCCATTTAGCTTTGTAGACAAAGGAATGAAATACATGGTAGGAAAGGACTGGAGGGACTTTTTTGATGTTGTCATTGTTCAAGCTGACAAACCACACTTCTTCAACAACTGTGGCAAACCTTTCAGACGTTTGGATGGCAACGGGGACCTTCAGTGGGACAAGATCAAGAGCTTGGATAAGGGCCAGATCTACAAACAGGGCAACCTGTTTGACTTTCTCAGGCTCACAGGATGGAGGGGATCCAAGGTGCTCTACTTTGGAGATCATCTGTACAGTGACTTGGCAGACCTGATGCTGCGTCACGGCTGGCGGACAGGGGCCATAGtaccagagctggaggtggagaccAGGGTGGTGAATACGGAGCAGTATGCACAAAGCCTCACCTGGCTGCAGGCACTCACCGGTCTACTGGAACGCATGCAGATGCATCGAGATCTAAAGTCAAAGGAAGTTCTACAGGATTGGTTGAAGGAAAGAGAAGAGCTTCGAGCTGTGACCAAGAACCTGTTCAACCCTCACTTTGGCAGCATTTTCCGCACCTGCCACAACCCCACATTCTTCTCCCGTCGCCTGTGTCGCTTCTCTGACCTCTACATGGCATCCATCAGCTGTCTGCTCAACTACGACCTCTCCTACACCTTCTACCCTCGTCGCACCCCCCTGCAGCACGAGGCGCCCCTGTGGATGGACCAGCTTTGCACTGGCTGCATGAAGACTCCCTTTCTGGAAGAGATGGCTCACATCCGCTGAGGGCCGCTCCGAGGTTTCACAAACCTCAAACTTGATATAAAGAGGCAGGAACTGAAGCTATGCCGGGAGTAAGGAGAATTGGGGCATGGTGCACAGATCATGAGTGCCACCTCCTGGGTTGTTGTATGCCAGTAGGTAAAGTGAAAAGGAAGTGTCCGAAATGGGTTAAATACGGAAGACACAACCCCTCTGAACCAGCATACAGTAATAGTAAACTATCTGGCTATTCAAGTTACCCAACATCACTTGGTTGGCAAGAACATTTAACGGGTTAAGCCTTTCGTTATTTTTTAGGTTAGTTAAGTTGAGGTTGCAACTTGTAATTAAAAACCAAAACAATTTGAACAATAACTGGTTGTACATGGTGCGGATATCTGTTACTTGAtaactcttctttttttttttctctcattttaaCCATGTAGCCTCCTCACTGTAACAGACTGATTTAATGACCTCATTAGTTTGAGTTATGAGTAATGGTGTTATAAGTTTATTGGGTTATAAGTTTATTGGTGTATAGTCTTGGCTGTTACTGTATTTGAGTACGACCATTCACATTGCAGTATGGTTCAGGGCAAGCTAAGTTGTTGCAGTCACTAGAAATCTATTTTGGGTCAATCTTGAATCGGTGGCATTTTTGCAACCATGAGTTAACACTTTAAAATGGCAAATAGTTACACATCATACATGTTTTTGTTTGTCAATAATACAATATAGGCTAATGCAAGTCCTTTATACTGCAACACTTTAAAGTCTCAAATTAAATATCACATCTTTTGTTGCTCAAAAGCTTAATTATCCATTTGTGTCACTTCAAAGTAATAAATGAGTTAAGAGTACCAAATATGACTGCTGAAACAACAATACAAATAGGGTATCTCCACTCTCATAAATGAGAGTTAAGTTATACGATATAAAAGTGTAATTTAGCTGACAAATGTGTGGTAATGGTTTATATATTTGCTCCTGgctgtcagtctctgtctctgtgggaCAGCCAgtggtgacccgtcattcagggcaggtgagagccccacctgtttaagCCCCACTCTTTTAGCCTGTTTTGCATGTAATTACGTGTCACCTATCACTTTGCaaacattgtaaaaaaaa

Function

NR:

description
5'-nucleotidase domain-containing protein 2-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615791.2 True 3142 mRNA 0.45 14 42912383 42930990

Neighbor

gene id symbol gene type direction distance location
LOC110532147 LOC106572219 coding upstream 696 42903096 ~ 42911687 (+)
LOC110532144 LOC106572221 coding upstream 45081 42753276 ~ 42867302 (+)
foxp3-1 foxp3-1 coding upstream 164630 42698951 ~ 42747753 (+)
LOC110532140 LOC106566931 coding upstream 217048 42690293 ~ 42695335 (+)
LOC110533013 LOC106566826 coding upstream 222900 42652132 ~ 42689483 (+)
LOC110532149 LOC106572217 coding downstream 4274 42935264 ~ 42963028 (+)
LOC110531181 LOC106572211 coding downstream 334527 43265517 ~ 43275006 (+)
taf10 LOC106572212 coding downstream 354851 43285841 ~ 43287979 (+)
ppih ppih coding downstream 357159 43288149 ~ 43323809 (+)
ybx1 LOC106572208 coding downstream 398378 43329368 ~ 43335690 (+)
G806141 NA non-coding upstream 27116 42884685 ~ 42885267 (+)
G805788 NA non-coding upstream 233034 42679144 ~ 42679349 (+)
G805786 NA non-coding upstream 234547 42677536 ~ 42677836 (+)
G805781 NA non-coding upstream 246400 42665769 ~ 42665983 (+)
G805779 NA non-coding upstream 247932 42661815 ~ 42664451 (+)
G806243 NA non-coding downstream 38785 42969775 ~ 42970005 (+)
G806244 NA non-coding downstream 39523 42970513 ~ 42970739 (+)
G806245 NA non-coding downstream 39833 42970823 ~ 42971089 (+)
G806246 NA non-coding downstream 41263 42972253 ~ 42972528 (+)
G806318 NA non-coding downstream 154344 43085334 ~ 43085625 (+)
G805600 NA other upstream 563597 42346176 ~ 42348786 (+)
G805451 NA other upstream 579945 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 887980 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 1476960 41423598 ~ 41452922 (+)
G803728 NA other upstream 1890881 41020936 ~ 41021502 (+)
G807677 NA other downstream 1264725 44195715 ~ 44196041 (+)
G807841 NA other downstream 1511672 44442662 ~ 44453077 (+)
G809685 NA other downstream 3203741 46134731 ~ 46135732 (+)
G812143 NA other downstream 5051011 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 5614464 48545454 ~ 48570593 (+)

Expression


Co-expression Network