tafa5l (LOC106572193)


Basic Information

Item Value
gene id tafa5l
gene name LOC106572193
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44247091 ~ 44292397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988103.1
aaatGTAGTTAAATTAGGCCTAGGCTACTAGTTGAACTTGGATAAATGTAGTCCACTACTCCCAACACGGTGTATTTGTGACCTTTAGGATTTTATGTTGATGTTTATTGCAGTCGATTGCACAGCCACCGTGCATAACTAGACTACATCCTGTTTTGTTTTGTAGGAGCCGAACTTCTATTTTTCTTGGCCTTTCAACTAAAGAAACTGAAGAATATGAGCTCGTGCGTCGTCGTAGGAAATTCGCGCTCAAGCGCAAAGAAGCTGACGATGCTTGCGGAGGTCTTGGCGTTCGCCTCCGCGTCTTGCAGTAGTAGGCTGCTTGAACGGTGAGTCTTTCGATCTGCAATCCGTGAATGGATAAACCATACGGTATATGGAATAAACCTGGAACTTCCACCGGGGATTATGAAGTGTATTAACTTCATATCATATGGTGATGTTTCGTGAGAATCCTCTCCTGACTCCTGAATGTCGTTTGAAACTTGCCAAATGGACATCTCATTTAGATTCAACTTGGGCTGCTATGAAGCTTCGATCGGCGTTGCACTCACTGCAAATCATTGACAGTCACAGAAAAATATAAGAAGGGAATTTGCTAATAAGGGATCGTGTCAATCATAGGCTACTCTATTGAATTGTCCTCCACTAATTTACCGCGGAAAATAGATGTCAACGGCGGGCTATCGAAACACCATAGGAATAAGTCTTCACCCATTTGAACACCACCTTAAAAGTGGGAAAATCGAGGGATACGACGAGACGCGGGAGAAAGGATGCAGTCGGGAAAGGGAATGAAGAAGGTCTCAGCAGGTGGAGGAGCGTCGCTCTGCTGTCTGTTGCTCTTGTGGGTCATCTACTCCCATCTCCTGAGAGAGGGCCAGTTGGCGGTGGGCACGTGTGAGATCGTGACGCTCAACAGAGACAGCAGCGTGCCCAGGCGGACCATCGACCGTCAGACTGCCCGCTGTGCCTGCAGGAGAGGCCAGATCGCTGGCACCACGCGAGCCAGGCCTGCCTGCGTTGACGCGCGTATCGTGAGGGGCAGACAGTGGTGTGAGATGGCGCCCTGCTTGGAGGGGGAGGTGTGTGGCCTCCTCTTCAACCGCTCTGGCTGGACCTGTACCAAAGGCAGTGGCCGTATCAAGACAGTCACGCCCTTGCCTAAGGAGCCATCGTAAGGAGTTAAGAACTAAGTGGGTAGGTTTATTGCCAGTCATGGCAGAAGGGGAACAGAGGCCAATGACCAGGCAAGCACAGTTTGTGTCCATTCGCCAATTTTGTGCTCAAACcactactacccccccccccctcccccacaccaccaccatctctcAGAGGAGCCCTACTATGTGACAGTGACACTCCTCTGCTCCCTCATTGGTCCAAAAGTCCGTACCTGCCCATGAAAGCAACTCGCCACAGCATCGTTATTGGAACCATATCACAAACTGAATGACAAatcctactgtatactgtatataacctgtgtTGTTTCAGCACAGCAAGCAGGATAGAACTGGGAGTCTAAACATGTGTAAGGAAACCATTTCGTCACCTACCCCTATGGAACACAATGTGAAGGCATTTTTGGTAACTTGGTTTAAACTAGTCTACAGTTATTTTCTGGGTACTGTAATGAGAACCATTCAGGGTCTTTTCACTCATGTAAATAGTCTGTTTGGTTAAGGCGTTGGTTTTGTCCTGTTGAAGAGCCATGATAGGTTTGGTGGACACAGGAGGTTAGTGAAACCAGGATATGATGCCAATGGGTGCCCGTCTTTAGCCATATTTCTCCATCCTCTAAGAAACACCACCACCTGTCTTGGGTATCTGAGGGGTGGGGTTCCAAGAGGTTTTGGGATGAAAATATATAGAGAAAAGGAGGAAATCCCATGCGAGTATCATGCTCTTCTCTTGTCGTCAATCTCTACAGTGAAAGAAGGATCAAATATATGATATACATTTACAGTTCTGGAGGAGAAACTTTTGGATGGATTGTTAGTGACTATCTAACTTGACATTGACAAAGCTTTGTTTATCTGGTGCCTACGACTGATGGGACCGTTGCAAGTAAGGATTCCCTAATAGTGTCTGTGGAGAAACCGCCCACGTGACATCACTCTGCTATAGGAGATCTTTATGAGACACTTACTGACAGACTACACCTGCCTGGCTCTTTATCCTGTGTTCtaattattttgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtctgggTGTCTGTGCCTCCTGATATACACTGTGAAATGGGAAATAGTTGACACAATCTTGTTCTTAAGTTTGACACATCCAGTACTGTACTTCTGGCAGAACTGTTCCTGAAGCTCACTATCTTGCAAACTGGTATAATCATGTTTTAGGGGATGCTCGTTGATTTAAAGCTGGAATCTGTACTTGGTGGAGCTGCCATGTCGGTTTGCGATATTAAAGAGACAGTTACTTCAAAACAATGAGCACTGTTCTTTCCCTCGGACATCACTGCACATCACTGCACATCACTGCACACCCGATAGAACAGCAGAGTATTTACTGCAATTTTCTTTTACCACAATGCTAGATGCTCATCTCCTCCGATAGCAAAAGCTCCGGGTCGAGATGGCGCTGTTTCACCTTATGCggatttcagctttttttttcaGAATCACATGTTTTTAATCCAAAAGTGTATTAATATTGACAGATCTATGTCACATAAGTTAAAAGCAGTAATGATAGTCCATGTGTAGTACCGATTCATTATTTCAGCGTTAGGTTTTAAATGGACTTTTTTATAGGAAATAGATGTATGGAGGTATGCTACTTGCAAAGTGCTGCTGTTTATGTTGGGTGTAATGTATACATTCACTGTATAATGTCCCATGGGTATTTATGTTACGGGATtacgagagagagtgagtgtcaCAGAGAGAATGAGACCATAAAGGACATTGTATATCA
>XM_036988104.1
aaaaatGTAGTTAAATTAGGCCTAGGCTACTAGTTGAACTTGGATAAATGTAGTCCACTACTCCCAACACGGTGTATTTGTGACCTTTAGGATTTTATGTTGATGTTTATTGCAGTCGATTGCACAGCCACCGTGCATAACTAGACTACATCCTGTTTTGTTTTGTAGGAGCCGAACTTCTATTTTTCTTGGCCTTTCAACTAAAGAAACTGAAGAATATGAGCTCGTGCGTCGTCGTAGGAAATTCGCGCTCAAGCGCAAAGAAGCTGACGATGCTTGCGGAGGTCTTGGCGTTCGCCTCCGCGTCTTGCAGTAGTAGGCTGCTTGAACGGTGAGTCTTTCGATCTGCAATCCGTGAATGGATAAACCATACGGTATATGGAATAAACCTGGAACTTCCACCGGGGATTATGAAGTGTATTAACTTCATATCATATGGTGATGTTTCGTGAGAATCCTCTCCTGACTCCTGAATGTCGTTTGAAACTTGCCAAATGGACATCTCATTTAGATTCAACTTGGGCTGCTATGAAGCTTCGATCGGCGTTGCACTCACTGCAAATCATTGACAGTCACAGAAAAATATAAGAAGGGAATTTGCTAATAAGGGATCGTGTCAATCATAGGCTACTCTATTGAATTGTCCTCCACTAATTTACCGCGGAAAATAGATGTCAACGGCGGGCTATCGAAACACCATAGGAATAAGTCTTCACCCATTTGAACACCACCTTAAAAGTGGGAAAATCGAGGGATACGACGAGACGCGGGAGAAAGGATGCAGTCGGGAAAGGGAATGAAGAAGGTCTCAGCAGGTGGAGGAGCGTCGCTCTGCTGTCTGTTGCTCTTGTGGGTCATCTACTCCCATCTCCTGAGAGAGGGCCAGTTGGCGGTGGGCACGTGTGAGATCGTGACGCTCAACAGAGACAGCAGCGTGCCCAGGCGGACCATCGACCGTCAGACTGCCCGCTGTGCCTGCAGGAGAGGCCAGATCGCTGGCACCACGCGAGCCAGGCCTGCCTGCGTTGACGCGCGTATCGTGAGGGGCAGACAGTGGTGTGAGATGGCGCCCTGCTTGGAGGGGGAGGTGTGTGGCCTCCTCTTCAACCGCTCTGGCTGGACCTGTACCAAAGGCAGTGGCCGTATCAAGACAGTCACGCCCTTGCCTAAGGAGCCATCGTAAGGAGTTAAGAACTAAGTGGGTTTATTGCCAGTCATGGCAGAAGGGGAACAGAGGCCAATGACCAGGCAAGCACAGTTTGTGTCCATTCGCCAATTTTGTGCTCAAACcactactacccccccccccctcccccacaccaccaccatctctcAGAGGAGCCCTACTATGTGACAGTGACACTCCTCTGCTCCCTCATTGGTCCAAAAGTCCGTACCTGCCCATGAAAGCAACTCGCCACAGCATCGTTATTGGAACCATATCACAAACTGAATGACAAatcctactgtatactgtatataacctgtgtTGTTTCAGCACAGCAAGCAGGATAGAACTGGGAGTCTAAACATGTGTAAGGAAACCATTTCGTCACCTACCCCTATGGAACACAATGTGAAGGCATTTTTGGTAACTTGGTTTAAACTAGTCTACAGTTATTTTCTGGGTACTGTAATGAGAACCATTCAGGGTCTTTTCACTCATGTAAATAGTCTGTTTGGTTAAGGCGTTGGTTTTGTCCTGTTGAAGAGCCATGATAGGTTTGGTGGACACAGGAGGTTAGTGAAACCAGGATATGATGCCAATGGGTGCCCGTCTTTAGCCATATTTCTCCATCCTCTAAGAAACACCACCACCTGTCTTGGGTATCTGAGGGGTGGGGTTCCAAGAGGTTTTGGGATGAAAATATATAGAGAAAAGGAGGAAATCCCATGCGAGTATCATGCTCTTCTCTTGTCGTCAATCTCTACAGTGAAAGAAGGATCAAATATATGATATACATTTACAGTTCTGGAGGAGAAACTTTTGGATGGATTGTTAGTGACTATCTAACTTGACATTGACAAAGCTTTGTTTATCTGGTGCCTACGACTGATGGGACCGTTGCAAGTAAGGATTCCCTAATAGTGTCTGTGGAGAAACCGCCCACGTGACATCACTCTGCTATAGGAGATCTTTATGAGACACTTACTGACAGACTACACCTGCCTGGCTCTTTATCCTGTGTTCtaattattttgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtctgggTGTCTGTGCCTCCTGATATACACTGTGAAATGGGAAATAGTTGACACAATCTTGTTCTTAAGTTTGACACATCCAGTACTGTACTTCTGGCAGAACTGTTCCTGAAGCTCACTATCTTGCAAACTGGTATAATCATGTTTTAGGGGATGCTCGTTGATTTAAAGCTGGAATCTGTACTTGGTGGAGCTGCCATGTCGGTTTGCGATATTAAAGAGACAGTTACTTCAAAACAATGAGCACTGTTCTTTCCCTCGGACATCACTGCACATCACTGCACATCACTGCACACCCGATAGAACAGCAGAGTATTTACTGCAATTTTCTTTTACCACAATGCTAGATGCTCATCTCCTCCGATAGCAAAAGCTCCGGGTCGAGATGGCGCTGTTTCACCTTATGCggatttcagctttttttttcaGAATCACATGTTTTTAATCCAAAAGTGTATTAATATTGACAGATCTATGTCACATAAGTTAAAAGCAGTAATGATAGTCCATGTGTAGTACCGATTCATTATTTCAGCGTTAGGTTTTAAATGGACTTTTTTATAGGAAATAGATGTATGGAGGTATGCTACTTGCAAAGTGCTGCTGTTTATGTTGGGTGTAATGTATACATTCACTGTATAATGTCCCATGGGTATTTATGTTACGGGATtacgagagagagtgagtgtcaCAGAGAGAATGAGACCATAAAGGACATTGTATATCA
>TU919246
TCTTGGCGTTCGCCTCCGCGTCTTGCAGTAGTAGGCTGCTTGAACGGTGAGTCTTTCGATCTGCAATCCGTGAATGGATAAACCATACGGTATATGGAATAAACCTGGAACTTCCACCGGGGATTATGAAGTGTATTAACTTCATATCATATGGTGATGTTTCGTGAGAATCCTCTCCTGACTCCTGAATGTCGTTTGAAACTTGCCAAATGGACATCTCATTTAGATTCAACTTGGGCTGCTATGAAGCTTCGATCGGCGTTGCACTCACTGCAAATCATTGACAGTCACAGAAAAATATAAGAAGGGAATTTGCTAATAAGGGATCGTGTCAATCATAGGCTACTCTATTGAATTGTCCTCCACTAATTTACCGCGGAAAATAGATGTCAACGGCGGGCTATCGAAACACCATAGGAATAAGTCTTCACCCATTTGAACACCACCTTAAAAGTGGGAAAATCGAGGGATACGACGAGACGCGGGAGAAAGGATGCAGTCGGGAAAGGGAATGAAGAAGGTCTCAGCAGGTGGAGGAGCGTCGCTCTGCTGTCTGTTGCTCTTGTGGGTCATCTACTCCCATCTCCTGAGAGAGGGCCAGTTGGCGGTGGGCACGTGTGAGATCGTGACGCTCAACAGAGACAGCAGCGTGCCCAGGCGGACCATCGACCGTCAGACTGCCCGCTGTGCCTGCAGGAGAGGCCAGATCGCTGGCACCACGCGAGCCAGGCCTGCCTGCGTTGACGCGCGTATCGTGAGGGGCAGACAGTGGTGTGAGATGGCGCCCTGCTTGGAGGGGGAGGTGTGTGGCCTCCTCTTCAACCGCTCTGGCTGGACCTGTACCAAAGGCAGTGGCCGTATCAAGACAGTCACGCCCTTGCCTAAGGAGCCATCGTAAGGAGTTAAGAACTAAGTGGGTAGGTTTATTGCCAGTCATGGCAGAAGGGGAACAGAGGCCAATGACCAGG
>TU919254
CTGCTTGAACGGTGAGTCTTTCGATCTGCAATCCGTGAATGGATAAACCATACGGTATATGGAATAAACCTGGAACTTCCACCGGGGATTATGAAGTGTATTAACTTCATATCATATGGTGATGTTTCGTGAGAATCCTCTCCTGACTCCTGAATGTCGTTTGAAACTTGCCAAATGGACATCTCATTTAGATTCAACTTGGGCTGCTATGAAGCTTCGATCGGCGTTGCACTCACTGCAAATCATTGACAGTCACAGAAAAATATAAGAAGGGAATTTGCTAATAAGGGATCGTGTCAATCATAGGCTACTCTATTGAATTGTCCTCCACTAATTTACCGCGGAAAATAGATGTCAACGGCGGGCTATCGAAACACCATAGGAATAAGTCTTCACCCATTTGAACACCACCTTAAAAGTGGGAAAATCGAGGGATACGACGAGACGCGGGAGAAAGGATGCAGTCGGGAAAGGGAATGAAGAAGGTCTCAGCAGGTGGAGGAGCGTCGCTCTGCTGTCTGTTGCTCTTGTGGGTCATCTACTCCCATCTCCTGAGAGAGGGCCAGTTGGCGGTGGGCACGTGTGAGATCGTGACGCTCAACAGAGACAGCAGCGTGCCCAGGCGGACCATCGACCGTCAGACTGCCCGCTGTGCCTGCAGGAGAGGCCAGATCGCTGGCACCACGCGAGCCAGGCCTGCCTGCGTTGACGCGCGTATCGTGAGGGGCAGACAGTGGTGTGAGATGGCGCCCTGCTTGGAGGGGGAGGTGTGTGGCCTCCTCTTCAACCGCTCTGGCTGGACCTGTACCAAAGGCAGTGGCCGTATCAAGACAGTCACGCCCTTGCCTAAGGAGCCATCGTAAGGAGTTAAGAACTAAGTGGGTAGGTTTATTGCCAGTCATGGCAGAAGGGGAACAGAGGCCAATGACCAGG

Function

NR:

description
protein FAM19A5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988103.1 False 2958 mRNA 0.45 5 44247091 44292395
XM_036988104.1 False 2956 mRNA 0.45 5 44247091 44292397
TU919246 False 968 TUCP 0.52 5 44248798 44292112
TU919254 True 933 TUCP 0.52 5 44248798 44292077

Neighbor

gene id symbol gene type direction distance location
mapk13 mk13 coding downstream 40626 44196588 ~ 44249763 (-)
brpf3b brpf3 coding downstream 53750 44178463 ~ 44193341 (-)
plod1a plod1 coding downstream 80103 44151220 ~ 44166988 (-)
mfn2 mfn2 coding downstream 96605 44121830 ~ 44150486 (-)
prdm16 prdm16 coding downstream 231537 43781726 ~ 44015554 (-)
mtor mtor coding upstream 41088 44333485 ~ 44456959 (-)
LOC110532177 LOC106572192 coding upstream 149971 44442368 ~ 44444009 (-)
LOC110532180 LOC106572190 coding upstream 570634 44863031 ~ 44870291 (-)
LOC100136637 LOC100329213 coding upstream 930282 45222679 ~ 45224379 (-)
rtel1 rtel1 coding upstream 932808 45225205 ~ 45281464 (-)
G807675 NA non-coding downstream 52543 44194341 ~ 44194548 (-)
G807655 NA non-coding downstream 69193 44177633 ~ 44177898 (-)
G807645 NA non-coding downstream 78721 44167934 ~ 44168370 (-)
G807637 NA non-coding downstream 101926 44144694 ~ 44145165 (-)
G807992 NA non-coding upstream 183420 44475817 ~ 44476053 (-)
G808013 NA non-coding upstream 202063 44494460 ~ 44494779 (-)
G808016 NA non-coding upstream 204655 44497052 ~ 44497280 (-)
G808031 NA non-coding upstream 213934 44506331 ~ 44506564 (-)
G806724 LOC106572208 other downstream 914388 43331930 ~ 43339589 (-)
LOC110532119 LOC106572245 other downstream 2107765 42125255 ~ 42141613 (-)
G804543 LOC106572259 other downstream 2809120 41437030 ~ 41437971 (-)
G804255 NA other downstream 3261846 40984482 ~ 40985245 (-)
G807941 NA other upstream 69019 44361416 ~ 44362166 (-)
G808375 NA other upstream 342162 44634559 ~ 44636846 (-)
G809071 LOC106572179 other upstream 1003459 45295856 ~ 45298740 (-)
pdyn pdyn other upstream 1024221 45316564 ~ 45318766 (-)
zmynd12 zmynd12 other upstream 1894867 46187156 ~ 46200250 (-)

Expression


Co-expression Network