LOC110532176 (LOC106572191)


Basic Information

Item Value
gene id LOC110532176
gene name LOC106572191
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 44425014 ~ 44429101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615846.2
GCACCAGCCACAGCAGTGCTTTACTGAGGAGCAAAGAGCCTGAGCAAACAGTTGGCTAAAGAGAGCTTCACTTCAACCAGTCAGGACTTTGATTCCTAACTCACTCCAACCAATCCTGCTCACTTAGCCTCTTCGGGACCTCCAGCACCGCTAAAGAATCAGACTGGACCAGGACAGCTTGTATTCCAGCAGAGCAAGAACATAGGTGCAAGTATCTCATCTTTGAAACATAGAAAATGGTTAAGATGTCTTTGCGCACGGTGGCTCTGACTGTCACCCTGCTGCTGGTGATGACAGAAGCGTGGGCGCAGAACCCACGGAAGAGGCTGGCGCCACCCAAGCCTCCAAAGGCACAGTGCTGCGATGAGGTGCGCTCCCTGAAGGTACAGGTGGCCAACCTAACCAGCATCCTGGAGGAGCTGAACCGCAAGCAGGAGGCAGACTTGATGAACGTAGTTCGGCAGATGATGGAGCTGGACAAGCAGAATCGGCAGCAGGAGGCCCGCGTCACAGAGGCCGAGAGCAAGTATTCCGAGATCAACAACCGGGTGGAGATCATGCAGCTACAAGCCGTCGAGTCTGCCATTCAGACCTCGTCAGATGCTGTCTACGACTGCGCATCCCTGTACACCAAGAACTACAAGATCTCGGGGGAGTACAAACTGCCTGCAGATGACTTCCTGAATACCCCTGAGATCAACGTATTCTGTGACATGGAAAGCAATGGCGGTGGGTGGACGATCATCCAGAGACGCAAGGTGGGCCTGACCTCCTTCAACCGCGACTGGAAACAGTACAAGAACGGCTTTGGCACCATCCGCGGAGACTTCTGGCTGGGCAATGACAACGTCTTCCGTATGACAAGGCAACCCAGCACACTGAGGATAGAGATGGAGGACTGGGAAGGCCAGACCCGCTTTGCAGAGTACAGCTACTTCACAGTGAAAAACGAGTTGAACAGCTACAAACTCTTCATCGCCAACTATAGTGGAAACGCCGGGGACTCTCTGCGCTACCACAACAACACCAACTTCAGCACCAAGGGCAAGGACAACGACAAATGTGTGGACAACTGTGCTTCACTACGCAAAGGTGGTTACTGGTACAACTGTTGCACTGACTCCAACCTGAATGGCGTGTTCTATCGCTATGGCGACCACATCAAGAACTCAGATGGAATCACTTGGTACGGCTGGCACGGGCCCAACTACTCCCTGAAGAGGGTGGAGATGAAGATCCGGCCACAGAATTTTCAACCATAAACGCTTCGAACTTCAAACCCTGAATGATGTGCATGCTTGCCGAGAGATTTAACAAAGCCTCTGAGAAACCAAAGTCTTTCCCCTTGACCTTTGTTAATGCCTGGAATATTTCTATGGGTTGAATGCGTAATGCATTTAACATGTTTGATTGTAAATTGTAGTTAGTTTTGTATTTATCGTTGAAATACTTTATTTTCTTAAAAGCTTTACAGAAGCCTCTTTACCACTGTTCTGTAAGGGTAACTGAATGTTGCTTCCCTCCATCTGTCTCAAAGCAATAGGGTATATTTATCAGTCCTAACTCAAGCTGTCTACTAGCCTGTGGTTAAGTTGATTACATGTATTTGGCAGGTAtgataatgcaaaaaaaaaatatgaagatCCATCAAGTGTTTTGCAATGGGCCTTTGTGAGCTGCTGGAATGGGAACAACCACCCAATGTACTTTCATCAGAAGTACCCGAAAGATTTTTATTGTGAGAGAAAATAACATGTCGATTTTTGGGGAATTGTGTCCTTTGTAAAACGTGTACAGCtctatattgtgttgttttgtgggatagaaaataaatgtgtatttttaAAAAAA

Function

NR:

description
angiopoietin-related protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615846.2 True 1851 mRNA 0.48 5 44425014 44429101

Neighbor

gene id symbol gene type direction distance location
LOC110533015 NA coding upstream 390174 44034316 ~ 44034840 (+)
wrap73 wrap73 coding upstream 660152 43743468 ~ 43764862 (+)
LOC118966053 NA coding upstream 734373 43666812 ~ 43690641 (+)
LOC110531183 gpr153 coding upstream 777564 43591505 ~ 43647450 (+)
acot7 acot7 coding upstream 845191 43508978 ~ 43579823 (+)
agrn LOC106572186 coding downstream 81952 44511053 ~ 44790843 (+)
LOC110532179 LOC106572187 coding downstream 370909 44800010 ~ 44857914 (+)
LOC110532181 LOC106572185 coding downstream 483863 44912964 ~ 44959122 (+)
prex1 LOC106572294 coding downstream 530475 44959576 ~ 45073059 (+)
LOC110532183 LOC106572183 coding downstream 647463 45076564 ~ 45119186 (+)
G807712 NA non-coding upstream 117680 44244624 ~ 44307334 (+)
G807678 NA non-coding upstream 175258 44196610 ~ 44249756 (+)
G807680 mk13 non-coding upstream 222726 44199775 ~ 44202288 (+)
G807665 brpf3 non-coding upstream 233237 44191067 ~ 44191777 (+)
G807656 NA non-coding upstream 246851 44177933 ~ 44178163 (+)
G807838 LOC106941359 non-coding downstream 9383 44438484 ~ 44450953 (+)
G808005 NA non-coding downstream 58355 44487456 ~ 44487730 (+)
G808027 NA non-coding downstream 74350 44503451 ~ 44503914 (+)
G808032 NA non-coding downstream 78147 44507248 ~ 44507477 (+)
G808145 NA non-coding downstream 352393 44781494 ~ 44782421 (+)
G807677 NA other upstream 228973 44195715 ~ 44196041 (+)
G805600 NA other upstream 2076228 42346176 ~ 42348786 (+)
G805451 NA other upstream 2092576 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 2400611 42021496 ~ 42027071 (+)
LOC110532096 LOC106572259 other upstream 2989591 41423598 ~ 41452922 (+)
G807841 NA other downstream 13561 44442662 ~ 44453077 (+)
G809685 NA other downstream 1705630 46134731 ~ 46135732 (+)
G812143 NA other downstream 3552900 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 4116353 48545454 ~ 48570593 (+)
G813071 NA other downstream 4530648 48959749 ~ 48959991 (+)

Expression


Co-expression Network