LOC110532189 (gmeb2)


Basic Information

Item Value
gene id LOC110532189
gene name gmeb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45303366 ~ 45311274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615875.2
CGACTATGGAACTCTGCGATAGCACCATCCGTGACTGCGCAAAACCGACGCCCGTAAACATCTCGTTAGGTCAACGTTAGCGAAAGCAGCTAACTAGCCTTACTCTTGAGCACTGCAACAGTAGCAGCCATTTCTGAAATCTGAAAACAAAAGTGAGACCTCAACCTCCCTCATGGCATCATCTGAGGTCAATGTTCATGTGGAGGAGGTGGTAGTCGTGACAACGCCGGATGGAGCAGGGGAGGGCTCAGCTGCCGAAGTGAAGACTGTGCTGGTGGCTACAGAGCTGACCCAACCGGGGGAGGAACTTGCAGATGGAAGCATTGAGTCTGAAACCGATGCCACCACCACTTTGACAAAGGAGGCAGTCttagTGAAGCTGTCAGGTGAGATGGATGTGGAGGCTGACGTGGTCTACCCGGTCACCTGTGGGGACGTGAAGGCCACTCTGGTCTGGAAGAAGTTTGTTTGTCCAGGCATCAACATCAAATGTGTCCAATTCAATGAGCATCTCATCAGTCCCAAGGAGTTTGTCTATATGGCTGGGAAATCTACACTGAAAGACTGGAAGAGAGCCATCCGAGTGAACGGCACAATGATCAGGAAAATCATGGACTCTGGCGAGCTGGATTTCTACCAGCACTCCAAAGTGTGCTCCAACACATGCCGCAGTACCAAGATTGACCTAGTGGGGACCAGAGTGTCACTCAGAAGCCAGCAGTCCACCGACTACGTCCCTGTCACCCCCTCCTCAGCCGACATGAATGGATCACAGGCCACGTTTCCAACAGAAGTATCATCAGACGAGACCACAGAATGGGTCACGGCCATAGGAGAGGACTCTGTGACGTTCTGGAGGGGTCTGAAGGAGGCAGGGCTgctggaggaggtggtggaggactTCCAGAAGGAGATCCAGGAGGTGCTAAAGGGCATGCAGGAGCGCATCACCGAGCCTCCCCTGCAAGTTAATGACGCTGTGCTGCTGAACAACATAGTGCAGAACTTTGGCATGCTCGACCTGGTTAAGAAAGTGCTGGCCAGTCACAAGAGCCAGATGGACCGATATAGGGAGCAGTATTCACGCAGTCTTGTCGCTCTGGAGCAGCAGTGTGACGAGCACAGGAAACGTGCCAAAGAGCTGAAAAGCAAATCCCAACACCTCAACAATGTCCTCATGACCCTGACCCCCGTGGCCACGCCACCCACGCCGAAACGCCCCCGCCTCACCCGCGCCGTCTCAGGCCCCGCCGTTATGTCCAGTGCCCCCACCCAGATCACCCTGCCCCTCACCCAGCTCACGGGCCTGCCTGCTGGGTGCAAAGTTCTCTCAATGGGTGGCGCGGTTGGTGCCGGCCAGCAGACCTACACGGTGCTGACATCCCCCGTGGGCGAGTTGGGCCCAGATGCCTCCAATCTGACGGTACTCTCTTCAGCCGCCGCCGTTCAGGAGGGCGCCGCCGCCACCACGGCCTTCATCAAGATGGTCAGCCCGGGCTACCAGCTAATCACGCTGCCTGCCGCGCTGGGAACCCAGCTGCAGGGCTTTGCAGGGGGCACGCTCCAGGGCACCCCCACCATGGTGGCAATGCCCATGGGTAACAACGCGCTGCAGGGTATGGCAGCAGTAACAGCATTGGATACACAGGTGGACGTTCAGGTGCAGGAAGCCAAGGAGACGGTGGAGGTGGAGAGTTAGAGAGATGTACTACTCctatattattacacacacacagcaggaacTGAGGCCCCGTTTGTCCTCACTGGTTTAAGTGCTGGAACCagtgtaggtctagtggtgttgaACTATGAAGCACCCATCTCAGTAAAACTTTAGAAAGATGACTTAAAAAATGTATAACAACGTATACATGCACTGCCCGTTTTAGTCTAAGAACCAgcacgtgtgtgtatgttttttccCAACATGCAAGTAGATGCCATCCCTGCTCAAAAGTCATGATCTTAGCTCTTCTCAGGTGTCAATTTTCACTGGGGTGTACGTGCCATGTTCACATTATTTCTTTACATTATGCTAAAAATGTAGATTCTACAAATGCTCATCTTTCAATGTCAGAATTATTTTTCATTTCAGCGATGAATTAACTGTATATATCTTTTTGTTGAATATTACAATATTAATTATGTTGGGTTCTGAAAATGAGATGCAAGACTTTTCTCACACACAGTATCAGCGCATGTGCGCGGGTTCGCCTCAGGCTGTTAGATCGTAGCAGCCAGGGAACTAAAACAGCGGAGAAGTTGAGCCTCGTGCTTCAACGCTCTTAGTGTTTGCGGAAATTGACCCACAATGCTGTTTACTTAATGCATCTatgtcatatcgctgagtctacttTTTAAAGCTTTGAACAAATTGAAAGTGAACAAACTGGTTGTTTTGTTGGACTTGTAAGAGTGTACACTTTGTAAATAAATTTGCTAAATTCTTCAATCTTTGTAA
>XM_036988126.1
ATCTATTCAAAAAGTGTCACGTTCGCTAGCTACTATAAAAACAGACAGATAGGTGCCTCTGTGACTAGTTAACAAGCAACCCACTGCTCCTCACTATGCAAGCTAGCTAGTAGCAGACCGTAAACACTGGATGCTTCAATATGTCCGTCGTCGTAACGTGCGTGCCGTGCTCGTGAGACCTCAACCTCCCTCATGGCATCATCTGAGGTCAATGTTCATGTGGAGGAGGTGGTAGTCGTGACAACGCCGGATGGAGCAGGGGAGGGCTCAGCTGCCGAAGTGAAGACTGTGCTGGTGGCTACAGAGCTGACCCAACCGGGGGAGGAACTTGCAGATGGAAGCATTGAGTCTGAAACCGATGCCACCACCACTTTGACAAAGGAGGCAGTCttagTGAAGCTGTCAGGTGAGATGGATGTGGAGGCTGACGTGGTCTACCCGGTCACCTGTGGGGACGTGAAGGCCACTCTGGTCTGGAAGAAGTTTGTTTGTCCAGGCATCAACATCAAATGTGTCCAATTCAATGAGCATCTCATCAGTCCCAAGGAGTTTGTCTATATGGCTGGGAAATCTACACTGAAAGACTGGAAGAGAGCCATCCGAGTGAACGGCACAATGATCAGGAAAATCATGGACTCTGGCGAGCTGGATTTCTACCAGCACTCCAAAGTGTGCTCCAACACATGCCGCAGTACCAAGATTGACCTAGTGGGGACCAGAGTGTCACTCAGAAGCCAGCAGTCCACCGACTACGTCCCTGTCACCCCCTCCTCAGCCGACATGAATGGATCACAGGCCACGTTTCCAACAGAAGTATCATCAGACGAGACCACAGAATGGGTCACGGCCATAGGAGAGGACTCTGTGACGTTCTGGAGGGGTCTGAAGGAGGCAGGGCTgctggaggaggtggtggaggactTCCAGAAGGAGATCCAGGAGGTGCTAAAGGGCATGCAGGAGCGCATCACCGAGCCTCCCCTGCAAGTTAATGACGCTGTGCTGCTGAACAACATAGTGCAGAACTTTGGCATGCTCGACCTGGTTAAGAAAGTGCTGGCCAGTCACAAGAGCCAGATGGACCGATATAGGGAGCAGTATTCACGCAGTCTTGTCGCTCTGGAGCAGCAGTGTGACGAGCACAGGAAACGTGCCAAAGAGCTGAAAAGCAAATCCCAACACCTCAACAATGTCCTCATGACCCTGACCCCCGTGGCCACGCCACCCACGCCGAAACGCCCCCGCCTCACCCGCGCCGTCTCAGGCCCCGCCGTTATGTCCAGTGCCCCCACCCAGATCACCCTGCCCCTCACCCAGCTCACGGGCCTGCCTGCTGGGTGCAAAGTTCTCTCAATGGGTGGCGCGGTTGGTGCCGGCCAGCAGACCTACACGGTGCTGACATCCCCCGTGGGCGAGTTGGGCCCAGATGCCTCCAATCTGACGGTACTCTCTTCAGCCGCCGCCGTTCAGGAGGGCGCCGCCGCCACCACGGCCTTCATCAAGATGGTCAGCCCGGGCTACCAGCTAATCACGCTGCCTGCCGCGCTGGGAACCCAGCTGCAGGGCTTTGCAGGGGGCACGCTCCAGGGCACCCCCACCATGGTGGCAATGCCCATGGGTAACAACGCGCTGCAGGGTATGGCAGCAGTAACAGCATTGGATACACAGGTGGACGTTCAGGTGCAGGAAGCCAAGGAGACGGTGGAGGTGGAGAGTTAGAGAGATGTACTACTCctatattattacacacacacagcaggaacTGAGGCCCCGTTTGTCCTCACTGGTTTAAGTGCTGGAACCagtgtaggtctagtggtgttgaACTATGAAGCACCCATCTCAGTAAAACTTTAGAAAGATGACTTAAAAAATGTATAACAACGTATACATGCACTGCCCGTTTTAGTCTAAGAACCAgcacgtgtgtgtatgttttttccCAACATGCAAGTAGATGCCATCCCTGCTCAAAAGTCATGATCTTAGCTCTTCTCAGGTGTCAATTTTCACTGGGGTGTACGTGCCATGTTCACATTATTTCTTTACATTATGCTAAAAATGTAGATTCTACAAATGCTCATCTTTCAATGTCAGAATTATTTTTCATTTCAGCGATGAATTAACTGTATATATCTTTTTGTTGAATATTACAATATTAATTATGTTGGGTTCTGAAAATGAGATGCAAGACTTTTCTCACACACAGTATCAGCGCATGTGCGCGGGTTCGCCTCAGGCTGTTAGATCGTAGCAGCCAGGGAACTAAAACAGCGGAGAAGTTGAGCCTCGTGCTTCAACGCTCTTAGTGTTTGCGGAAATTGACCCACAATGCTGTTTACTTAATGCATCTatgtcatatcgctgagtctacttTTTAAAGCTTTGAACAAATTGAAAGTGAACAAACTGGTTGTTTTGTTGGACTTGTAAGAGTGTACACTTTGTAAATAAATTTGCTAAATTCTTCAATCTTTGTAA
>XM_021615873.2
TTTATCACCACGACGTAGCGTTCGCTGTCTGTACGTGAACTGCCAAGCTAAAACGTAGCTACAGCCTGTGAAATTGAATTTCTAATGTATGGTTTATCTAACGTTGTAAAATATCCAGCTGAATACGTCTCCCTATCTGTATCGGCATGCCCTGTTTGGGCCTAGTTTGCTTGCTAaacacttagctagctaactcgCTAGCTACTTAGCAAACTTCTTACGCCATAAATATTGCTATTGCTAGCTACAGCACAGAACAAGCTGCAATGAGAACTGTGTAGGTAACAACTAACTCGCTCAATAATAGCATTGATGTGATATTGATTAGTTAGCCAGGCCCTCTCCACAACATTTATCACTAACAGCGCTAGTTTAGCTACGTAGCCAATTGAAACGGGCCTATTAAAGCCAAGCTTATGATCCCTACCGCCATAATCACCCCTGTAAGGCCAGTTGGTGGTAGCCACAATGAAGTGCCCAATAGCTTCTGTTAATTGCCAATAGTCCACCTCATCTCATGCAAGCTAAACCAGCCTTGAAGACATTGAAGGGAGATGTGCTCTTGAATTACAAATGTTATCATTAGCACACAACTGTGTCTTCGTATCACTTAGTGAGACCTCAACCTCCCTCATGGCATCATCTGAGGTCAATGTTCATGTGGAGGAGGTGGTAGTCGTGACAACGCCGGATGGAGCAGGGGAGGGCTCAGCTGCCGAAGTGAAGACTGTGCTGGTGGCTACAGAGCTGACCCAACCGGGGGAGGAACTTGCAGATGGAAGCATTGAGTCTGAAACCGATGCCACCACCACTTTGACAAAGGAGGCAGTCttagTGAAGCTGTCAGGTGAGATGGATGTGGAGGCTGACGTGGTCTACCCGGTCACCTGTGGGGACGTGAAGGCCACTCTGGTCTGGAAGAAGTTTGTTTGTCCAGGCATCAACATCAAATGTGTCCAATTCAATGAGCATCTCATCAGTCCCAAGGAGTTTGTCTATATGGCTGGGAAATCTACACTGAAAGACTGGAAGAGAGCCATCCGAGTGAACGGCACAATGATCAGGAAAATCATGGACTCTGGCGAGCTGGATTTCTACCAGCACTCCAAAGTGTGCTCCAACACATGCCGCAGTACCAAGATTGACCTAGTGGGGACCAGAGTGTCACTCAGAAGCCAGCAGTCCACCGACTACGTCCCTGTCACCCCCTCCTCAGCCGACATGAATGGATCACAGGCCACGTTTCCAACAGAAGTATCATCAGACGAGACCACAGAATGGGTCACGGCCATAGGAGAGGACTCTGTGACGTTCTGGAGGGGTCTGAAGGAGGCAGGGCTgctggaggaggtggtggaggactTCCAGAAGGAGATCCAGGAGGTGCTAAAGGGCATGCAGGAGCGCATCACCGAGCCTCCCCTGCAAGTTAATGACGCTGTGCTGCTGAACAACATAGTGCAGAACTTTGGCATGCTCGACCTGGTTAAGAAAGTGCTGGCCAGTCACAAGAGCCAGATGGACCGATATAGGGAGCAGTATTCACGCAGTCTTGTCGCTCTGGAGCAGCAGTGTGACGAGCACAGGAAACGTGCCAAAGAGCTGAAAAGCAAATCCCAACACCTCAACAATGTCCTCATGACCCTGACCCCCGTGGCCACGCCACCCACGCCGAAACGCCCCCGCCTCACCCGCGCCGTCTCAGGCCCCGCCGTTATGTCCAGTGCCCCCACCCAGATCACCCTGCCCCTCACCCAGCTCACGGGCCTGCCTGCTGGGTGCAAAGTTCTCTCAATGGGTGGCGCGGTTGGTGCCGGCCAGCAGACCTACACGGTGCTGACATCCCCCGTGGGCGAGTTGGGCCCAGATGCCTCCAATCTGACGGTACTCTCTTCAGCCGCCGCCGTTCAGGAGGGCGCCGCCGCCACCACGGCCTTCATCAAGATGGTCAGCCCGGGCTACCAGCTAATCACGCTGCCTGCCGCGCTGGGAACCCAGCTGCAGGGCTTTGCAGGGGGCACGCTCCAGGGCACCCCCACCATGGTGGCAATGCCCATGGGTAACAACGCGCTGCAGGGTATGGCAGCAGTAACAGCATTGGATACACAGGTGGACGTTCAGGTGCAGGAAGCCAAGGAGACGGTGGAGGTGGAGAGTTAGAGAGATGTACTACTCctatattattacacacacacagcaggaacTGAGGCCCCGTTTGTCCTCACTGGTTTAAGTGCTGGAACCagtgtaggtctagtggtgttgaACTATGAAGCACCCATCTCAGTAAAACTTTAGAAAGATGACTTAAAAAATGTATAACAACGTATACATGCACTGCCCGTTTTAGTCTAAGAACCAgcacgtgtgtgtatgttttttccCAACATGCAAGTAGATGCCATCCCTGCTCAAAAGTCATGATCTTAGCTCTTCTCAGGTGTCAATTTTCACTGGGGTGTACGTGCCATGTTCACATTATTTCTTTACATTATGCTAAAAATGTAGATTCTACAAATGCTCATCTTTCAATGTCAGAATTATTTTTCATTTCAGCGATGAATTAACTGTATATATCTTTTTGTTGAATATTACAATATTAATTATGTTGGGTTCTGAAAATGAGATGCAAGACTTTTCTCACACACAGTATCAGCGCATGTGCGCGGGTTCGCCTCAGGCTGTTAGATCGTAGCAGCCAGGGAACTAAAACAGCGGAGAAGTTGAGCCTCGTGCTTCAACGCTCTTAGTGTTTGCGGAAATTGACCCACAATGCTGTTTACTTAATGCATCTatgtcatatcgctgagtctacttTTTAAAGCTTTGAACAAATTGAAAGTGAACAAACTGGTTGTTTTGTTGGACTTGTAAGAGTGTACACTTTGTAAATAAATTTGCTAAATTCTTCAATCTTTGTAA

Function

symbol description
gmeb2 Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human GMEB2 (glucocorticoid modulatory element binding protein 2).

NR:

description
glucocorticoid modulatory element-binding protein 2-like isoform X1

GO: NA

KEGG:

id description
K24505 GMEB; glucocorticoid modulatory element-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615875.2 False 2461 mRNA 0.51 10 45303366 45311274
XM_036988126.1 False 2481 mRNA 0.51 10 45303530 45311274
XM_021615873.2 True 2922 mRNA 0.49 9 45303719 45311274

Neighbor

gene id symbol gene type direction distance location
LOC110532188 LOC106572179 coding upstream 4614 45285980 ~ 45298752 (+)
chrna4b LOC106572182 coding upstream 111526 45176863 ~ 45191840 (+)
LOC110532183 LOC106572183 coding upstream 184180 45076564 ~ 45119186 (+)
LOC110532184 LOC106572184 coding upstream 217791 45076911 ~ 45085575 (+)
prex1 LOC106572294 coding upstream 230307 44959576 ~ 45073059 (+)
LOC118966054 NA coding downstream 4500 45315766 ~ 45318483 (+)
LOC110532191 stk35 coding downstream 94848 45406122 ~ 45424517 (+)
LOC110532193 LOC106572175 coding downstream 151354 45462628 ~ 45484801 (+)
LOC110532192 LOC106572174 coding downstream 174398 45485672 ~ 45494087 (+)
LOC110532197 cept1 coding downstream 206768 45518042 ~ 45541267 (+)
G808793 rtel1 non-coding upstream 50363 45241313 ~ 45253003 (+)
G808783 rtel1 non-coding upstream 65794 45227441 ~ 45237572 (+)
G808777 NA non-coding upstream 81994 45221092 ~ 45221372 (+)
G808724 NA non-coding upstream 141504 45161494 ~ 45161862 (+)
G808863 NA non-coding downstream 46918 45358192 ~ 45358415 (+)
G808869 NA non-coding downstream 55245 45366519 ~ 45366894 (+)
G808874 NA non-coding downstream 62624 45373898 ~ 45374231 (+)
G809234 NA non-coding downstream 288065 45599339 ~ 45604558 (+)
G807841 NA other upstream 850289 44442662 ~ 44453077 (+)
G807677 NA other upstream 1107325 44195715 ~ 44196041 (+)
G805600 NA other upstream 2954580 42346176 ~ 42348786 (+)
G805451 NA other upstream 2970928 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3278963 42021496 ~ 42027071 (+)
G809685 NA other downstream 823457 46134731 ~ 46135732 (+)
G812143 NA other downstream 2670727 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3234180 48545454 ~ 48570593 (+)
G813071 NA other downstream 3648475 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3692045 48962187 ~ 49006710 (+)

Expression


Co-expression Network