LOC110532197 (cept1)


Basic Information

Item Value
gene id LOC110532197
gene name cept1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45518042 ~ 45541267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988131.1
TGGGAAATCCCTACGCCTGCCTGTCAAAAATCTTTCCGCTCTTTCTCAAAGCCGCGGTCGAGTTTCGTGATATTCACCTGCATCAGCTGATCCTAGTCTTCCCGAAAACGGTTCTAACTCGTTGGGAACTAGACGGCTGTCGCTGCTCTATGCACTTGTTTTCTTGTTAGCTACATATAAGCTGACAGAAGAGGCCGAGGTTGCCGTAGTGTAGTAGGCTGTTAGCCAGACAACGATAGAGGCCACCGCTTCCGTGTAACGGAATCAACCTAGGCTTCAACCCAGTAAAACGGTTGTGGCCCCACTGTGGATTCCCTGGATTGGACCGGGGCGGAGGCAGTCGTAGGCAGAGCAGGCGCCACGTGAAGTGCGGTTTCGACTTCCCCTATGAGTAGCAGCACCGGTCAGAGAGCACCACGGACCCGGGCTGCGAAGGCAAGCCAGGGGGCAGGGGGGACAACGACATGGACCCCTCAGGACCAGAGTGTGGACCCTTCATACAGGCCTACTACTACTGCAGGTCCAACTACAGCCTGCAGTGGTGGGGGGAGTTCCTGTGTCCTGAGTAAGCTCATCCAACTGCCGGCTCCGCCACTGTCGCGCCACCAGCTGAAGAAGTTAGAGGAGCACAGATACAGCAGTGCAGGTCGCTCACTTCTGGAGCCCTTCATGCAGCACTACTGGGAGTGGCTAGTGGCATGTGTGCCAGCATGGATAGCCCCCAACCTCATCACTATTGTGGGCCTGGCCATCAACATTCTCACCACATTGGTGCTGGTGTACTACTGCCCCACTGCCACTGAACAGGCACCGCTGTGGGTGTACCTGTCTTGTGCAGTGGGCCTCTTCATCTACCAATCACTGGACGCCATCGATGGGAAACAGGCACGGCGCACCAATAGCAGCACCCCACTGGGAGAGCTCTTTGACCATGGCTGTGACTCCCTttcaacagTGTTTGTGGTCTTGGGCACCTGTATCGCCGTCCAACTTGGAACTAACCCCGACTGGATGTTCTTCTGCTGCTTCGCCGGCATGTTCATGTTCTACTGTGCTCACTGGCAGACCTACGTGTCAGGAACCCTGCGCTTTGGCATCATTGATGTGACTGAAGTGCAATTCTTCATTATAATCATGTATTTGCTGGCTGCCATCGGAGGACCAGCTTTTTGGCAGTTCTTGATCCCTGTGGTGAACATCCAGATTAAGCTCATTCCAGCCATCCTCACTGTGGCGGGAGCCATCTTCTCCTGCACCAACTACTTTCGGGTCATATTCACGGGAGGAGTAGGAAAGAACGGATCCACCATAGCGGGAACGAGTGTCCTGTCGCCGTTCTTCCACATAGGGTCAGTCATCATTCTGGCCGTCATGATCTACAAGAAGTCTGCGTCCCAGCTGTTTGAGAAGCACCCCTGTCTCTATGTCCTGGCCTTTGGGTTTGTGTCGGCCAAGATCACCAACAAGCTAGTGGTAGCTCATATGACAAAAAGTGAGATGTATCTCCATGACTTGGCTTACCTGGGGCCAGGGCTGCTCTTCTTGGACCAGTATTTTAACAGTTTCATAGACGAGTACGTGGTCCTCTGGGTGGCACTGTTCCTGTCCATCTTTGATCTAGTGCGCTACTGCGTTAGCGTCTGCAACCAGATCGCCTCTCACCTGCACATCTTCGTGTTCAAGATCAAACCCCCCAACCTACGGTCTGCCTCTGCCTCCCGGTCAGGCAAAGACGTCTGGTGTAACTGGTCTGGTGACACTACTGACAGGTGGTGACACCGTCCGGCTGGAGCTGGTGGAATTACCTCAACCGCCTCCCCCTTGTCTCCACAGGGTTCCCATTGGATGAGACCAATTGGAGGCAGTCTTTCTACGAATGTATAATGCTGCGTTCACAACATCTCGTCATTTCGTAAATACCAGCATACAACTGGGAAAAATCCACATGAACgcccctccaactggtaattactagtgggaaactatCATCCCTGTGCTCAGTTTCCCACTTGCACCTCTCTGACGTCATTTGTCAACAAACAAGACAGCAAGCTTGCTGGTATTTTCAGCAGTTGTTTATGGTAAGAACAAAATACAAATTGTTAATACAAAAATGATTCTGTTAATCTTCCTTTAGATTTAGAAAGTGAAATATGGATATACTTTTTATGGGCAAAAAATAGCAAAACAATCAGAAGCCTTCTAATGACCTCCATGTTTGATAATATTTCCCAATTCAAAACGTGAATACACCCAACTGATAATTACTACCTTCCCATTTGGTTATGAACGCAGTATTAGCCAATTCAATTATGAATACATTGAGGGTGGggaaaattagattttttttaatgaagatAATTTATTTCAGTCTGGTGTGCAATAGTGATCCGTTTTTGCAGATGTGTGGTGTAAAAGGTACCTAGCCGAACAGGAGAATGAGGAATATGTTTTCTGTTGAGGTTTAGTTTGTCATAAAAGAAGAACCTGGTTATTTGGTAACAAACTATTTGAGATTTAGAAGTTATCTAACCAaaggttatggataggggttaatGTTGCTTACTATAACCATGCTACCACTATCCAAATGCactgaaaataaaatgttatccATAGGAAGGAGCAGGTTATGCCTAACCAAATGATATACTTAGCTATGAGAAAAACGCTTAGTGTATTCGCGTGTTTCTGTCCGAGCAATATGACTTAAATGCCGGTCTGTTCTTTTAGTAATGGTACTTGTTCAGCACATCTACATACAATTCCCACCTGTATTCCACTCCAGAGAAAAATGCTAGTTCTCTGTTTAAGGTGTAGCGCAGAGTATTTCTTTATAGTATTTCTGCATTCTGTTTGAACCATCTGAAAAGCTGTCATTAGAGATTGCGAATAGCATTGTGGAAGAACACATGGTCATGAGCGAAGACTGCCTTGCATTTCTCTTATTGATCCTATGTCATCCTTGTCCTGTATAGCCTACATCAGggttattcaactcttaccctatgaggtctagagcctgctggttttctgttctaccggATAATgcattgcacacacctggtgtcccaggtctaaatcagtctctGATTTGAGGGGAACAATGGGGGGGGGGAAGCTTTGGAACTGGCTGCAAGCTCCAGGGTTGAGTTTGAGAGGCCTGCATGATCTATGACACTGAATTGTATTATGTTCAATAAGCCCCAAACAAGGGGACCATTGTCTCATCATGTTTACATGATATGGCTATGTACTTCATTTTCTCCCATGTGATTGCAGTACAAATGGACCTGCATTAATACTACTGTTTCTGAGAGATGGAACACAGTTCCTGCTGTATGCTTCCAGTTAACTTGTGCCATATGTGATGCAAGTCAATGGAGCACTTCTCGTTACATGCGTTCAGACTCTTAACCGTTAGGAATCTAGCTCATCATTATGATATTCAAGCAACAGTTATGAGTACCGGTATGTGTTCTGTCCACCGCAAGTCATTTTTGTCACCATGGgatgacaaaaaaaatatgtttggaATGTTTTAGTGATAGGTGTTACTCCAACCTCCTCACACTCCTTTTACAATATTCATCTGTTTTttctctttaaaaaaacaaacattttatatatatatttttaaaaaattaattCAACTGTGTTGCTTTTTAGTTGAGCTTTGGTTATACTGTAGCGTTGATGAAATAGGAGTCGATCAGGCTGGCACCAGTGTTAATCAGTTCCTCCAAGTGGGGATGTATGTGTAAAATGCAATAGTCGGTATGCAGCAGTTGCCTTAAATGCTAAGTATTTGCATTAGATGGGAAGGTTTCAAAACTACAGCCTGAAAAGGCTAGTGTTAGACCTAAGTGGTGTGCTATAAATGCTTGATTAGTAACTGATGAATACAATGAAGGGTATGTTTAGATGTTCTCTTCCACTTCACTCCCTGATGTTACCCCTACAGCCACTCCAACTCCCCCAGAGCAACACTGGTGTCATGGCAGCTGCATCCCCATttaggtttctctctctgttcatagTTAGTGAACTTTGGTCTGTTACACAATAGCCCATCAGTTATCTCTCCTGTGTGGAACAGTTCAGTCCACCCATTTTGTATGGGGTCTTATCATTAACCAAGTATTTAACTATACCTGTATGGACGCAGTACCGTCCATGGTCAAACataaggaatgtttttttttaaagcaaaaaTTAAGGAATGTCTACCCTACCAATTTAGCTAATATCAAACAGTGATGCACAGAGTATTAACATGTCTACCGTTTAATGTCTCTTCATAACAAGAGAAGAGCTTGTCAATGTTTGTATCCGATGCATGGGATGGGCATTACAACCCACTGTAATGTTCAGTCAATGGCCACATGGATATGTAACTGATAGTGTTCAACCAATTGAAACACCGCCTCAAGCGTAACTAATTTTCCCTTGGATTGTTTATTTTCTGTGCAATGCAGATATTTAAGATGACTTGCAAAGGGTGCATCATTggtcagtgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgctttagtGTTTAATGATCAATGGTTTTAATTTGTTGTTTGGTCAAAATTGTTACTTTTCTGTTAAAGAAAACCATTCATTTTTGAATAAACAAGCCTATGTAAAATAAA

Function

symbol description
cept1 Predicted to enable diacylglycerol cholinephosphotransferase activity and ethanolaminephosphotransferase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to act upstream of or within phosphatidylcholine biosynthetic process. Predicted to be located in nuclear membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane.

NR:

description
choline/ethanolaminephosphotransferase 1-like

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG:

id description
K13644 CEPT1; choline/ethanolamine phosphotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988131.1 True 4666 mRNA 0.44 9 45518042 45541267

Neighbor

gene id symbol gene type direction distance location
LOC110532192 LOC106572174 coding upstream 23955 45485672 ~ 45494087 (+)
LOC110532193 LOC106572175 coding upstream 33241 45462628 ~ 45484801 (+)
LOC110532191 stk35 coding upstream 93525 45406122 ~ 45424517 (+)
LOC118966054 NA coding upstream 200244 45315766 ~ 45318483 (+)
LOC110532189 gmeb2 coding upstream 206768 45303366 ~ 45311274 (+)
LOC110532198 dram2 coding downstream 176 45541443 ~ 45546493 (+)
ela2l LOC106572163 coding downstream 230098 45771365 ~ 45775008 (+)
LOC110532211 LOC106572158 coding downstream 617682 46158949 ~ 46185603 (+)
ccdc30 ccdc30 coding downstream 666129 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 721940 46263207 ~ 46277905 (+)
G808874 NA non-coding upstream 143811 45373898 ~ 45374231 (+)
G808869 NA non-coding upstream 151148 45366519 ~ 45366894 (+)
G808863 NA non-coding upstream 159627 45358192 ~ 45358415 (+)
G808823 NA non-coding upstream 190100 45283986 ~ 45327942 (+)
G809234 NA non-coding downstream 58072 45599339 ~ 45604558 (+)
G809248 LOC106572168 non-coding downstream 74877 45616144 ~ 45616483 (+)
G809249 NA non-coding downstream 75611 45616878 ~ 45617212 (+)
G809256 efhd2 non-coding downstream 90505 45631772 ~ 45715145 (+)
G809267 lrif1 non-coding downstream 99097 45640364 ~ 45643150 (+)
G807841 NA other upstream 1064965 44442662 ~ 44453077 (+)
G807677 NA other upstream 1322001 44195715 ~ 44196041 (+)
G805600 NA other upstream 3169256 42346176 ~ 42348786 (+)
G805451 NA other upstream 3185604 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3493639 42021496 ~ 42027071 (+)
G809685 NA other downstream 593464 46134731 ~ 46135732 (+)
G812143 NA other downstream 2440734 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 3004187 48545454 ~ 48570593 (+)
G813071 NA other downstream 3418482 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3462052 48962187 ~ 49006710 (+)

Expression


Co-expression Network