LOC110532198 (dram2)


Basic Information

Item Value
gene id LOC110532198
gene name dram2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45541443 ~ 45546493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988132.1
GCAAAATTGGAAACAGACTTGGGGTTTGATGTGTAGCGTTGTGATATTCTTCTTGTGTTTTAATTAACATATGTATAAGTGCCATAATGGGGCAGTTTCCCTTACACAGATTAAGCcaagtcctggactaaaaagcactttaAATTAGATGCTACGCTTAATCTGGATCTGGGGAACTGCCCCAATATTTGAACTCTTATTAAGGGATAATTGTTATTAAGTATTTTTTTGTCATATTGTGTATGCCTCTTTGGCACATGCGTGCATGTGGGGTCAGCCAGCACTAAGTTAAATGAAAGTCATACTGTCTGGGAGTCAGCTGGTTTTAGGCTGCGCAAAGAACAGCAGACTAGTCACAAGTCCTGTTTGAGGGGAGGGGTGTGTCTGAGTTCTTAGACTGTCTGTATggaacagacaaacacacattctcttgctctcacacacacagttctgttCTCTTCATGACCCATCAAAGCAGTTTCCCAACTGACTAATAAAAGCAGGGTTTCACAGAGACCGAGCAACTTTTCTCACGCTTGAAACCTGTGTCTATCTAGAGCTATACTGCTCTTGCTGCGTTGAATGGCGTCCTGAGTCTCTCGCTCTGCCTACTACTGGGGTATGTGGTGGTTCCAGAGGGGGGTATGTGCCCTCCCTGCAGCCCTGGTCACCTGGTCCTTGGCCACCTTTGTCGTCAGCTATGTCACCGCTGTGCTGCTGGGCCACGTCGACCTACTAGTGCCCTACATCAGTGATGCCAGCGCAGTGGTTCCGGAACGCTGTGTCTTTGGGTTCATGCTGAGCATCTCTTCCTTTTTAGGTGTAGCCACTGTCTATGTGCGATAcaagcaggtccaggctctggcaCTAGGGGGCGAGCTTAAACTGCATCGACTTAACTGTGCTGGCATGGTCCTGGGTATCATGAGCTCAGTGGGCATGTGCGTCGTCGCCAACTTCCAGAAAACCACCATCGTGTCAGTGCACCTGCTGGGGGCGGGGCTGACCTTTGGCTGCGGGACGCTCTACATCCTGGTTCAGACGGGGGTGTCATACCACATGCAGCCTCGCTTCCACGGCCGAGACATCCTGTGGGCGCGCACCGCCGTGGGGCTGTGGACAATGGCCAGCGTCATCATCTCGTTTGTGTCATCAGCCATTCTGTATGATGACCTACCAGGCGTGGACGTAGATAGAAAAATACGCTGGAGACCAGAAGAAACGGGTTACACAGCCCATCTGGTCAGTGCTGTGGCTGAGTGGTGTCTGGCCTTCTCCTTTATCTGCTTCTTCCTCACTTACATCCGAGATTTCCAGGTAGTCTTCCTGCTCTCCCCAATGGCAAAGCAAAATAAACACTACAATTGCAAGACTTCATTCTCAGATCTGTTTTGTATAACAAATTACATTTGTATGAGTAGAGCTGAATGTGATACATTTAATATGTTACAGCTCATTCTCAGTTGTTTCATCAGCTAAGGAAGATGGGTTGAATGGCTTCTCACCATAGAAGTCTCAGGTGTATTCATGTTCTTTGCT
>XM_036988133.1
GCAAAATTGGAAACAGACTTGGGGTTTGATGTGTAGCGTTGTGATATTCTTCTTGTGTTTTAATTAACATATGTATAAGTGCCATAATGGGGCAGTTTCCCTTACACAGATTAAGCcaagtcctggactaaaaagcactttaAATTAGATGCTACGCTTAATCTGGATCTGGGGAACTGCCCCAATATTTGAACTCTTATTAAGGGATAATTGTTATTAAGTATTTTTTTGTCATATTGTGTATGCCTCTTTGGCACATGCGTGCATGTGGGGTCAGCCAGCACTAAGTTAAATGAAAGTCATACTGTCTGGGAGTCAGCTGGTTTTAGGCTGCGCAAAGAACAGCAGACTAGTCACAAGTCCTGTTTGAGGGGAGGGGTGTGTCTGAGTTCTTAGACTGTCTGTATggaacagacaaacacacattctcttgctctcacacacacagttctgttCTCTTCATGACCCATCAAAGCAGTTTCCCAACTGACTAATAAAAGCAGGGTTTCACAGAGACCGAGCAACTTTTCTCACGCTTGAAACCTGTGTCTATCTAGAGCTATACTGCTCTTGCTGCGTTGAATGGCGTCCTGAGTCTCTCGCTCTGCCTACTACTGGACTGCTCTGACAGGACCCCTTCCTGTCCCAGGGGGTATGTGGTGGTTCCAGAGGGGGGTATGTGCCCTCCCTGCAGCCCTGGTCACCTGGTCCTTGGCCACCTTTGTCGTCAGCTATGTCACCGCTGTGCTGCTGGGCCACGTCGACCTACTAGTGCCCTACATCAGTGATGCCAGCGCAGTGGTTCCGGAACGCTGTGTCTTTGGGTTCATGCTGAGCATCTCTTCCTTTTTAGGTGTAGCCACTGTCTATGTGCGATAcaagcaggtccaggctctggcaCTAGGGGGCGAGCTTAAACTGCATCGACTTAACTGTGCTGGCATGGTCCTGGGTATCATGAGCTCAGTGGGCATGTGCGTCGTCGCCAACTTCCAGAAAACCACCATCGTGTCAGTGCACCTGCTGGGGGCGGGGCTGACCTTTGGCTGCGGGACGCTCTACATCCTGGTTCAGACGGGGGTGTCATACCACATGCAGCCTCGCTTCCACGGCCGAGACATCCTGTGGGCGCGCACCGCCGTGGGGCTGTGGACAATGGCCAGCGTCATCATCTCGTTTGTGTCATCAGCCATTCTGTATGATGACCTACCAGGCGTGGACGTAGATAGAAAAATACGCTGGAGACCAGAAGAAACGGGTTACACAGCCCATCTGGTCAGTGCTGTGGCTGAGTGGTGTCTGGCCTTCTCCTTTATCTGCTTCTTCCTCACTTACATCCGAGATTTCCAGGTAGTCTTCCTGCTCTCCCCAATGGCAAAGCAAAATAAACACTACAATTGCAAGACTTCATTCTCAGATCTGTTTTGTATAACAAATTACATTTGTATGAGTAGAGCTGAATGTGATACATTTAATATGTTACAGCTCATTCTCAGTTGTTTCATCAGCTAAGGAAGATGGGTTGAATGGCTTCTCACCATAGAAGTCTCAGGTGTATTCATGTTCTTTGCT
>XM_021615888.2
GCAAAATTGGAAACAGACTTGGGGTTTGATGTGTAGCGTTGTGATATTCTTCTTGTGTTTTAATTAACATATGTATAAGTGCCATAATGGGGCAGTTTCCCTTACACAGATTAAGCcaagtcctggactaaaaagcactttaAATTAGATGCTACGCTTAATCTGGATCTGGGGAACTGCCCCAATATTTGAACTCTTATTAAGGGATAATTGTTATTAAGTATTTTTTTGTCATATTGTGTATGCCTCTTTGGCACATGCGTGCATGTGGGGTCAGCCAGCACTAAGTTAAATGAAAGTCATACTGTCTGGGAGTCAGCTGGTTTTAGGCTGCGCAAAGAACAGCAGACTAGTCACAAGTCCTGTTTGAGGGGAGGGGTGTGTCTGAGTTCTTAGACTGTCTGTATggaacagacaaacacacattctcttgctctcacacacacagttctgttCTCTTCATGACCCATCAAAGCAGTTTCCCAACTGACTAATAAAAGCAGGGTTTCACAGAGACCGAGCAACTTTTCTCACGCTTGAAACCTGTGTCTATCTAGAGCTATACTGCTCTTGCTGCGTTGAATGGCGTCCTGAGTCTCTCGCTCTGCCTACTACTGGGGTATGTGGTGGTTCCAGAGGGGGGTATGTGCCCTCCCTGCAGCCCTGGTCACCTGGTCCTTGGCCACCTTTGTCGTCAGCTATGTCACCGCTGTGCTGCTGGGCCACGTCGACCTACTAGTGCCCTACATCAGTGATGCCAGCGCAGTGGTTCCGGAACGCTGTGTCTTTGGGTTCATGCTGAGCATCTCTTCCTTTTTAGGTGTAGCCACTGTCTATGTGCGATAcaagcaggtccaggctctggcaCTAGGGGGCGAGCTTAAACTGCATCGACTTAACTGTGCTGGCATGGTCCTGGGTATCATGAGCTCAGTGGGCATGTGCGTCGTCGCCAACTTCCAGAAAACCACCATCGTGTCAGTGCACCTGCTGGGGGCGGGGCTGACCTTTGGCTGCGGGACGCTCTACATCCTGGTTCAGACGGGGGTGTCATACCACATGCAGCCTCGCTTCCACGGCCGAGACATCCTGTGGGCGCGCACCGCCGTGGGGCTGTGGACAATGGCCAGCGTCATCATCTCGTTTGTGTCATCAGCCATTCTGTATGATGACCTACCAGGCGTGGACGTAGATAGAAAAATACGCTGGAGACCAGAAGAAACGGGTTACACAGCCCATCTGGTCAGTGCTGTGGCTGAGTGGTGTCTGGCCTTCTCCTTTATCTGCTTCTTCCTCACTTACATCCGAGATTTCCAGAAAATCCAGTTGCGGGTACAAGTTGTCATGCAGAGTAATCACCTGTACGACTATGCCCATTACGACGTGAGAGAGCATGCCCACCATGGAGAGCACTCGCCACTGCTGGCTGGGAGCATCTGACTACACTGCCCCTTTGTGTCCACACTGTAGTCCCACCCCAGGAAAAGCATCTTTGTGCCCCGAAATGACTTCCCTTCTTCATCTCTTGCTAAATGGAAGGGTTGAATAGGCTGGAACAATAATGCATTTGCCCACGCGATTTGGGGTCTGTGATTTAAGGAAAGGAGGCAAGAGGATGCCATTGGAGACTCAGCACTTCATTGACTGAACAACTGTGTTGTGTTCATTACATCACACAATGGAAAATTTGTTTCCTTATTGGACCAGTCCAGGCAGTCCCTCCCTGCTtcagtttggtgcctaatgaacacaagtAAAGATATTTAGTGGGTCAAAATGTTAATTGAAAGTGTGATGCATCAGCTTTGATTTGACTTACGGTCCATGAGTTAGCTTTTGCTGGAAACATTTCTGGTATTTTACTTTTCTACAAATAAATCTGTTTTTAATGACTTGTC
>XM_036988134.1
GCAAAATTGGAAACAGACTTGGGGTTTGATGTGTAGCGTTGTGATATTCTTCTTGTGTTTTAATTAACATATGTATAAGTGCCATAATGGGGCAGTTTCCCTTACACAGATTAAGCcaagtcctggactaaaaagcactttaAATTAGATGCTACGCTTAATCTGGATCTGGGGAACTGCCCCAATATTTGAACTCTTATTAAGGGATAATTGTTATTAAGTATTTTTTTGTCATATTGTGTATGCCTCTTTGGCACATGCGTGCATGTGGGGTCAGCCAGCACTAAGTTAAATGAAAGTCATACTGTCTGGGAGTCAGCTGGTTTTAGGCTGCGCAAAGAACAGCAGACTAGTCACAAGTCCTGTTTGAGGGGAGGGGTGTGTCTGAGTTCTTAGACTGTCTGTATggaacagacaaacacacattctcttgctctcacacacacagttctgttCTCTTCATGACCCATCAAAGCAGTTTCCCAACTGACTAATAAAAGCAGGGTTTCACAGAGACCGAGCAACTTTTCTCACGCTTGAAACCTGTGTCTATCTAGAGCTATACTGCTCTTGCTGCGTTGAATGGCGTCCTGAGTCTCTCGCTCTGCCTACTACTGGGGTATGTGGTGGTTCCAGAGGGGGGTATGTGCCCTCCCTGCAGCCCTGGTCACCTGGTCCTTGGCCACCTTTGTCGTCAGCTATGTCACCGCTGTGCTGCTGGGCCACGTCGACCTACTAGTGCCCTACATCAGTGATGCCAGCGCAGTGGTTCCGGAACGCTGTGTCTTTGGGTTCATGCTGAGCATCTCTTCCTTTTTAGGTGTAGCCACTGTCTATGTGCGATAcaagcaggtccaggctctggcaCTAGGGGGCGAGCTTAAACTGCATCGACTTAACTGTGCTGGCATGGTCCTGGGTATCATGAGCTCAGTGGGCATGTGCGTCGTCGCCAACTTCCAGAAAACCACCATCGTGTCAGTGCACCTGCTGGGGGCGGGGCTGACCTTTGGCTGCGGGACGCTCTACATCCTGGTTCAGACGGGGGTGTCATACCACATGCAGCCTCGCTTCCACGGCCGAGACATCCTGTGGGCGCGCACCGCCGTGGGGCTGTGGACAATGGCCAGCGTCATCATCTCGTTTGTGTCATCAGCCATTCTGTATGATGACCTACCAGGCGTGGACGTAGATAGAAAAATACGCTGGAGACCAGAAGAAACGAAAATCCAGTTGCGGGTACAAGTTGTCATGCAGAGTAATCACCTGTACGACTATGCCCATTACGACGTGAGAGAGCATGCCCACCATGGAGAGCACTCGCCACTGCTGGCTGGGAGCATCTGACTACACTGCCCCTTTGTGTCCACACTGTAGTCCCACCCCAGGAAAAGCATCTTTGTGCCCCGAAATGACTTCCCTTCTTCATCTCTTGCTAAATGGAAGGGTTGAATAGGCTGGAACAATAATGCATTTGCCCACGCGATTTGGGGTCTGTGATTTAAGGAAAGGAGGCAAGAGGATGCCATTGGAGACTCAGCACTTCATTGACTGAACAACTGTGTTGTGTTCATTACATCACACAATGGAAAATTTGTTTCCTTATTGGACCAGTCCAGGCAGTCCCTCCCTGCTtcagtttggtgcctaatgaacacaagtAAAGATATTTAGTGGGTCAAAATGTTAATTGAAAGTGTGATGCATCAGCTTTGATTTGACTTACGGTCCATGAGTTAGCTTTTGCTGGAAACATTTCTGGTATTTTACTTTTCTACAAATAAATCTGTTTTTAATGACTTGTC

Function

symbol description
dram2 Involved in photoreceptor cell maintenance; regulation of autophagy; and visual perception. Located in Golgi apparatus and lysosome. Implicated in cone-rod dystrophy.

NR:

description
DNA damage-regulated autophagy modulator protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988132.1 False 1539 mRNA 0.48 7 45541443 45545906
XM_036988133.1 False 1572 mRNA 0.49 7 45541443 45545906
XM_021615888.2 False 1898 mRNA 0.48 8 45541443 45546493
XM_036988134.1 True 1805 mRNA 0.48 7 45541443 45546493

Neighbor

gene id symbol gene type direction distance location
LOC110532197 cept1 coding upstream 176 45518042 ~ 45541267 (+)
LOC110532192 LOC106572174 coding upstream 47356 45485672 ~ 45494087 (+)
LOC110532193 LOC106572175 coding upstream 56642 45462628 ~ 45484801 (+)
LOC110532191 stk35 coding upstream 116926 45406122 ~ 45424517 (+)
LOC118966054 NA coding upstream 223645 45315766 ~ 45318483 (+)
ela2l LOC106572163 coding downstream 224872 45771365 ~ 45775008 (+)
LOC110532211 LOC106572158 coding downstream 612456 46158949 ~ 46185603 (+)
ccdc30 ccdc30 coding downstream 660903 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 716714 46263207 ~ 46277905 (+)
LOC118966055 NA coding downstream 754771 46301264 ~ 46304747 (+)
G808874 NA non-coding upstream 167212 45373898 ~ 45374231 (+)
G808869 NA non-coding upstream 174549 45366519 ~ 45366894 (+)
G808863 NA non-coding upstream 183028 45358192 ~ 45358415 (+)
G808823 NA non-coding upstream 213501 45283986 ~ 45327942 (+)
G809234 NA non-coding downstream 52846 45599339 ~ 45604558 (+)
G809248 LOC106572168 non-coding downstream 69651 45616144 ~ 45616483 (+)
G809249 NA non-coding downstream 70385 45616878 ~ 45617212 (+)
G809256 efhd2 non-coding downstream 85279 45631772 ~ 45715145 (+)
G809267 lrif1 non-coding downstream 93871 45640364 ~ 45643150 (+)
G807841 NA other upstream 1088366 44442662 ~ 44453077 (+)
G807677 NA other upstream 1345402 44195715 ~ 44196041 (+)
G805600 NA other upstream 3192657 42346176 ~ 42348786 (+)
G805451 NA other upstream 3209005 42332093 ~ 42332438 (+)
LOC110532114 LOC106572334 other upstream 3517040 42021496 ~ 42027071 (+)
G809685 NA other downstream 588238 46134731 ~ 46135732 (+)
G812143 NA other downstream 2435508 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2998961 48545454 ~ 48570593 (+)
G813071 NA other downstream 3413256 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 3456826 48962187 ~ 49006710 (+)

Expression


Co-expression Network