LOC110532196 (dennd2d)


Basic Information

Item Value
gene id LOC110532196
gene name dennd2d
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45546593 ~ 45580976 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615886.2
AGTTACAGTGTAACTCGACTTCCAGCGAAGCCAACCCGTGAACAGCATGCGTTGTGTACTCTCCTTACGCTACAAACGGAATGAGGTCGATAAAACAAATAGTCTGAGGAAACGATCCAGAGAAATAAGATAACATTGAGTGTTAAGCCTGTGAGAGCCATGAGTGGAGATGAGGTGCAGAGGAGGATTCGAAAAGCACATGGACTAAAACATACGAAGCAGAGATGGAGTGAGCAACCTCAAAGCGCCGCCAATGGGAAAGAGAAAGACGCCCTGTCATTTGACCTCAGCACCGTCCAACCCAGTGAGGGTGAGAGAGGTGCCATCAAGAGGCTAAGCACCATGTGGTCCTCATTCCGGGGCAAACACGACAAAGACCGGGTAATGAAGGAGCCACCCTTTCAGGAGTCTTTGGAGCCAGCTCCGGTGGACACCCCCGCCAAGGAGCAGCGCTACATGAGTGGGCAGTACTTCTTTGAGTACTTGGTTGTGGTCAGCCTCAAGAAATCCAAAGAGGGGGCCTACGAGCCACAGATCACCTACCAGTTCCCCAAAAGGGATGGGATGGTGAGATtccaaagagaggaggaggaaaagaccCTGAAGGCCATCACACTCTTCTGTTTCCCTGAGGGCATCAACTGGGCCCCCCTAACAGAGTACCACAGTGAGACATTCTCATTTGTCTTGACTGAGATCGACGGCAGCAGAAGGAACGGATACTGTAggaggctactgCCCCACGGCAACGGCGCTCGCCCCCCTGAGGCCTACTGCATCATTAGCAGGTTGGCTTGTTTCGGACTGTTCTCCAAGATCTTTGACGAGGTGGAGAAGCGGCGCCAGATCTCCATGGCGATGATCTACCCGTTCATGCAAAGCCTGAGGGAGGCGGCGTTCCCCGCCCCGGGCAACACAGTCAAGATCAAGAGCTTCATCCCCGACAAAGGCACTGAGATCATCAGTCTGACGCGGCCGCTGGACTCGTGGCTAGAGCATGTGGACTTCCGCACACTCTTTCGCTGCTTGACCGATGAGGAGGTCCTGCTCGTGTTCGCTGCCGCTGTTATGGAGCGACGCATCGTCTTCATAGCGGAGGAGCTCAGCACCCTGTCCCAGGTGATCCACGCCGTGGTTGCCCTGCTCTACCCCTTCACCTGGCAGCACACCTTCATCTCCATCGTCCCCGAGATCCTCATTGACGTGGTCATGGCCCCCACCCCCTACCTGCTGGGAGTGCAGAAGCGGCTCCTGGAACAGGTCACGGACCAGAGCGACCTGCTTGTTGTGGACTTGTCAGAGGATAAGGGGGACACTTTCCTAGTTCGAAGCGGAGATGAGAAGTCTATTCTGCCCCCTAAGCTCCAAGATGAAATACTGCAGGCACTAAGAAATCGGAAAGAAGAAGCCACTGTGGAGGAGCTGAACACGGTAGTCTCGGAAGCCTTCCTGCCCTTCTTCGTGAAGACTGTCGGCCATTTTGCCTCATACGTGACGCGGAAAGGAAGCGGGCAGCCGGGGGTGTTTCAGAGCAGGGCCTTCTACAAGGCCATCGAGTCCAAGACCACGCGGCACTTTGTCAAGAAGTTCCTCCAGACCCAGATGTTTGACCTGTTTATCCAAGAGttggagcagcagcagccagcGAGCCCCCAGCAAGGGATTTTCCACAAAAAGATTGTTGAATACCAGGAaaagaagaaaagagagaaggcAAAGAAGAGATAGTGTCTTGTGAATACACTGTAAACGAGGCTGATTGTGTATATAAGGGATTTACTGTAGATGTGATAATAGATTTGAGATGTAAATATTGGAAGTGAATCATTTGTATTTATAGTTTTATGTATTGGGGTAACAGTGGGTATTTTATGTGTTGCTACTGTATATGATAGACGGTTGACAAGACCACTTGTTAGAATGAGTGTTGGGCTCAAATCTGTCACCATCTGAACCTGCTATTATTAAGCAGAAAAAAATTCTAATAAAGACTGAATCTTTGAACCTTCA
>XM_036988135.1
CAGTTACAGTGTAACTCGACTTCCAGCGAAGCCAACCCGTGAACAGCATGCGTTGTGTACTCTCCTTACGCTACAAACGGAATGAGGTCGATAAAACAAATAGTCTGAGGAAACGATCCAGAGAAATAAGATAACATTGAGTGTTAAGCCTGTGAGAGCCATGAGTGGAGATGAGGTGCAGAGGAGGATTCGAAAAGCACATGGACTAAAACATACGAAGCAGAGATGGAGCACCGTCCAACCCAGTGAGGGTGAGAGAGGTGCCATCAAGAGGCTAAGCACCATGTGGTCCTCATTCCGGGGCAAACACGACAAAGACCGGGTAATGAAGGAGCCACCCTTTCAGGAGTCTTTGGAGCCAGCTCCGGTGGACACCCCCGCCAAGGAGCAGCGCTACATGAGTGGGCAGTACTTCTTTGAGTACTTGGTTGTGGTCAGCCTCAAGAAATCCAAAGAGGGGGCCTACGAGCCACAGATCACCTACCAGTTCCCCAAAAGGGATGGGATGGTGAGATtccaaagagaggaggaggaaaagaccCTGAAGGCCATCACACTCTTCTGTTTCCCTGAGGGCATCAACTGGGCCCCCCTAACAGAGTACCACAGTGAGACATTCTCATTTGTCTTGACTGAGATCGACGGCAGCAGAAGGAACGGATACTGTAggaggctactgCCCCACGGCAACGGCGCTCGCCCCCCTGAGGCCTACTGCATCATTAGCAGGTTGGCTTGTTTCGGACTGTTCTCCAAGATCTTTGACGAGGTGGAGAAGCGGCGCCAGATCTCCATGGCGATGATCTACCCGTTCATGCAAAGCCTGAGGGAGGCGGCGTTCCCCGCCCCGGGCAACACAGTCAAGATCAAGAGCTTCATCCCCGACAAAGGCACTGAGATCATCAGTCTGACGCGGCCGCTGGACTCGTGGCTAGAGCATGTGGACTTCCGCACACTCTTTCGCTGCTTGACCGATGAGGAGGTCCTGCTCGTGTTCGCTGCCGCTGTTATGGAGCGACGCATCGTCTTCATAGCGGAGGAGCTCAGCACCCTGTCCCAGGTGATCCACGCCGTGGTTGCCCTGCTCTACCCCTTCACCTGGCAGCACACCTTCATCTCCATCGTCCCCGAGATCCTCATTGACGTGGTCATGGCCCCCACCCCCTACCTGCTGGGAGTGCAGAAGCGGCTCCTGGAACAGGTCACGGACCAGAGCGACCTGCTTGTTGTGGACTTGTCAGAGGATAAGGGGGACACTTTCCTAGTTCGAAGCGGAGATGAGAAGTCTATTCTGCCCCCTAAGCTCCAAGATGAAATACTGCAGGCACTAAGAAATCGGAAAGAAGAAGCCACTGTGGAGGAGCTGAACACGGTAGTCTCGGAAGCCTTCCTGCCCTTCTTCGTGAAGACTGTCGGCCATTTTGCCTCATACGTGACGCGGAAAGGAAGCGGGCAGCCGGGGGTGTTTCAGAGCAGGGCCTTCTACAAGGCCATCGAGTCCAAGACCACGCGGCACTTTGTCAAGAAGTTCCTCCAGACCCAGATGTTTGACCTGTTTATCCAAGAGttggagcagcagcagccagcGAGCCCCCAGCAAGGGATTTTCCACAAAAAGATTGTTGAATACCAGGAaaagaagaaaagagagaaggcAAAGAAGAGATAGTGTCTTGTGAATACACTGTAAACGAGGCTGATTGTGTATATAAGGGATTTACTGTAGATGTGATAATAGATTTGAGATGTAAATATTGGAAGTGAATCATTTGTATTTATAGTTTTATGTATTGGGGTAACAGTGGGTATTTTATGTGTTGCTACTGTATATGATAGACGGTTGACAAGACCACTTGTTAGAATGAGTGTTGGGCTCAAATCTGTCACCATCTGAACCTGCTATTATTAAGCAGAAAAAAATTCTAATAAAGACTGAATCTTTGAACCTTCA
>XM_021615885.2
GTGCATTGTACACACTGTCAACATGCACACTTCCTCATAGTGTAGGGCACCAGCAACCTTTGGAACTGTTAAACATACAGAGACAAGGAGAGTACGAACAAAAGACttcaaagtgaaataaaaataaaggaaataaaaaatataggtTGAAAGTAAAGAGGCAAGGAACGACAgaattgagagagtgagagaaagttaTGGGGACTTCAACTTGACCGAATGATCCGCTGCCATTTCCTCTAGCAGTGGTGTCTGCCTGGGTAGAGGTGAACTGCAAAACGAACCAAGCAGTGGATTGTTCTATCAAACACAATTTGAGGACACGATCAGTGGATATACCTACAGGTTGATTCTGATTGGGCAAGAGATTGCACGTTGGTGAGTACCGaCAAAGAGAGctaggatggaaggagagagtcCTCAGAGAAGAAGCTGGAGCTTTTCCTCTTTCTATCCCAAACGTAAACAGCTAACAGATGGCCAAGAGACTGGATTTAGACGGAGAGGGCAGCAGTTCTACTCCTCGGTGCGCGAGGCCTCAAAAAACGAGAGGGTtctagaggagagggaggaggttgATGCTCCTGTGACGGGCGCCTCAGGAGGACCCACCCATCTGGTCCAGCTGAGACCGATGGCTGACCGGCTAAAGAGTGAGCAACCTCAAAGCGCCGCCAATGGGAAAGAGAAAGACGCCCTGTCATTTGACCTCAGCACCGTCCAACCCAGTGAGGGTGAGAGAGGTGCCATCAAGAGGCTAAGCACCATGTGGTCCTCATTCCGGGGCAAACACGACAAAGACCGGGTAATGAAGGAGCCACCCTTTCAGGAGTCTTTGGAGCCAGCTCCGGTGGACACCCCCGCCAAGGAGCAGCGCTACATGAGTGGGCAGTACTTCTTTGAGTACTTGGTTGTGGTCAGCCTCAAGAAATCCAAAGAGGGGGCCTACGAGCCACAGATCACCTACCAGTTCCCCAAAAGGGATGGGATGGTGAGATtccaaagagaggaggaggaaaagaccCTGAAGGCCATCACACTCTTCTGTTTCCCTGAGGGCATCAACTGGGCCCCCCTAACAGAGTACCACAGTGAGACATTCTCATTTGTCTTGACTGAGATCGACGGCAGCAGAAGGAACGGATACTGTAggaggctactgCCCCACGGCAACGGCGCTCGCCCCCCTGAGGCCTACTGCATCATTAGCAGGTTGGCTTGTTTCGGACTGTTCTCCAAGATCTTTGACGAGGTGGAGAAGCGGCGCCAGATCTCCATGGCGATGATCTACCCGTTCATGCAAAGCCTGAGGGAGGCGGCGTTCCCCGCCCCGGGCAACACAGTCAAGATCAAGAGCTTCATCCCCGACAAAGGCACTGAGATCATCAGTCTGACGCGGCCGCTGGACTCGTGGCTAGAGCATGTGGACTTCCGCACACTCTTTCGCTGCTTGACCGATGAGGAGGTCCTGCTCGTGTTCGCTGCCGCTGTTATGGAGCGACGCATCGTCTTCATAGCGGAGGAGCTCAGCACCCTGTCCCAGGTGATCCACGCCGTGGTTGCCCTGCTCTACCCCTTCACCTGGCAGCACACCTTCATCTCCATCGTCCCCGAGATCCTCATTGACGTGGTCATGGCCCCCACCCCCTACCTGCTGGGAGTGCAGAAGCGGCTCCTGGAACAGGTCACGGACCAGAGCGACCTGCTTGTTGTGGACTTGTCAGAGGATAAGGGGGACACTTTCCTAGTTCGAAGCGGAGATGAGAAGTCTATTCTGCCCCCTAAGCTCCAAGATGAAATACTGCAGGCACTAAGAAATCGGAAAGAAGAAGCCACTGTGGAGGAGCTGAACACGGTAGTCTCGGAAGCCTTCCTGCCCTTCTTCGTGAAGACTGTCGGCCATTTTGCCTCATACGTGACGCGGAAAGGAAGCGGGCAGCCGGGGGTGTTTCAGAGCAGGGCCTTCTACAAGGCCATCGAGTCCAAGACCACGCGGCACTTTGTCAAGAAGTTCCTCCAGACCCAGATGTTTGACCTGTTTATCCAAGAGttggagcagcagcagccagcGAGCCCCCAGCAAGGGATTTTCCACAAAAAGATTGTTGAATACCAGGAaaagaagaaaagagagaaggcAAAGAAGAGATAGTGTCTTGTGAATACACTGTAAACGAGGCTGATTGTGTATATAAGGGATTTACTGTAGATGTGATAATAGATTTGAGATGTAAATATTGGAAGTGAATCATTTGTATTTATAGTTTTATGTATTGGGGTAACAGTGGGTATTTTATGTGTTGCTACTGTATATGATAGACGGTTGACAAGACCACTTGTTAGAATGAGTGTTGGGCTCAAATCTGTCACCATCTGAACCTGCTATTATTAAGCAGAAAAAAATTCTAATAAAGACTGAATCTTTGAACCTTCA
>XM_021615884.2
TTCTACTAACTGAGGCGTGCATTGTACACACTGTCAACATGCACACTTCCTCATAGTGTAGGGCACCAGCAACCTTTGGAACTGTTAAACATACAGAGACAAGGAGAGTACGAACAAAAGACttcaaagtgaaataaaaataaaggaaataaaaaatataggtTGAAAGTAAAGAGGCAAGGAACGACAgaattgagagagtgagagaaagttaTGGGGACTTCAACTTGACCGAATGATCCGCTGCCATTTCCTCTAGCAGTGGTGTCTGCCTGGGTAGAGGTGAACTGCAAAACGAACCAAGCAGTGGATTGTTCTATCAAACACAATTTGAGGACACGATCAGTGGATATACCTACAGGTTGATTCTGATTGGGCAAGAGATTGCACGTTGaCAAAGAGAGctaggatggaaggagagagtcCTCAGAGAAGAAGCTGGAGCTTTTCCTCTTTCTATCCCAAACGTAAACAGCTAACAGATGGCCAAGAGACTGGATTTAGACGGAGAGGGCAGCAGTTCTACTCCTCGGTGCGCGAGGCCTCAAAAAACGAGAGGGTtctagaggagagggaggaggttgATGCTCCTGTGACGGGCGCCTCAGGAGGACCCACCCATCTGGTCCAGCTGAGACCGATGGCTGACCGGCTAAAGAGTGAGCAACCTCAAAGCGCCGCCAATGGGAAAGAGAAAGACGCCCTGTCATTTGACCTCAGCACCGTCCAACCCAGTGAGGGTGAGAGAGGTGCCATCAAGAGGCTAAGCACCATGTGGTCCTCATTCCGGGGCAAACACGACAAAGACCGGGTAATGAAGGAGCCACCCTTTCAGGAGTCTTTGGAGCCAGCTCCGGTGGACACCCCCGCCAAGGAGCAGCGCTACATGAGTGGGCAGTACTTCTTTGAGTACTTGGTTGTGGTCAGCCTCAAGAAATCCAAAGAGGGGGCCTACGAGCCACAGATCACCTACCAGTTCCCCAAAAGGGATGGGATGGTGAGATtccaaagagaggaggaggaaaagaccCTGAAGGCCATCACACTCTTCTGTTTCCCTGAGGGCATCAACTGGGCCCCCCTAACAGAGTACCACAGTGAGACATTCTCATTTGTCTTGACTGAGATCGACGGCAGCAGAAGGAACGGATACTGTAggaggctactgCCCCACGGCAACGGCGCTCGCCCCCCTGAGGCCTACTGCATCATTAGCAGGTTGGCTTGTTTCGGACTGTTCTCCAAGATCTTTGACGAGGTGGAGAAGCGGCGCCAGATCTCCATGGCGATGATCTACCCGTTCATGCAAAGCCTGAGGGAGGCGGCGTTCCCCGCCCCGGGCAACACAGTCAAGATCAAGAGCTTCATCCCCGACAAAGGCACTGAGATCATCAGTCTGACGCGGCCGCTGGACTCGTGGCTAGAGCATGTGGACTTCCGCACACTCTTTCGCTGCTTGACCGATGAGGAGGTCCTGCTCGTGTTCGCTGCCGCTGTTATGGAGCGACGCATCGTCTTCATAGCGGAGGAGCTCAGCACCCTGTCCCAGGTGATCCACGCCGTGGTTGCCCTGCTCTACCCCTTCACCTGGCAGCACACCTTCATCTCCATCGTCCCCGAGATCCTCATTGACGTGGTCATGGCCCCCACCCCCTACCTGCTGGGAGTGCAGAAGCGGCTCCTGGAACAGGTCACGGACCAGAGCGACCTGCTTGTTGTGGACTTGTCAGAGGATAAGGGGGACACTTTCCTAGTTCGAAGCGGAGATGAGAAGTCTATTCTGCCCCCTAAGCTCCAAGATGAAATACTGCAGGCACTAAGAAATCGGAAAGAAGAAGCCACTGTGGAGGAGCTGAACACGGTAGTCTCGGAAGCCTTCCTGCCCTTCTTCGTGAAGACTGTCGGCCATTTTGCCTCATACGTGACGCGGAAAGGAAGCGGGCAGCCGGGGGTGTTTCAGAGCAGGGCCTTCTACAAGGCCATCGAGTCCAAGACCACGCGGCACTTTGTCAAGAAGTTCCTCCAGACCCAGATGTTTGACCTGTTTATCCAAGAGttggagcagcagcagccagcGAGCCCCCAGCAAGGGATTTTCCACAAAAAGATTGTTGAATACCAGGAaaagaagaaaagagagaaggcAAAGAAGAGATAGTGTCTTGTGAATACACTGTAAACGAGGCTGATTGTGTATATAAGGGATTTACTGTAGATGTGATAATAGATTTGAGATGTAAATATTGGAAGTGAATCATTTGTATTTATAGTTTTATGTATTGGGGTAACAGTGGGTATTTTATGTGTTGCTACTGTATATGATAGACGGTTGACAAGACCACTTGTTAGAATGAGTGTTGGGCTCAAATCTGTCACCATCTGAACCTGCTATTATTAAGCAGAAAAAAATTCTAATAAAGACTGAATCTTTGAACCTTCA

Function

symbol description
dennd2d Enables guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of catalytic activity. Located in cytosol and nucleoplasm.

NR:

description
DENN domain-containing protein 2D-like isoform X1

GO: NA

KEGG:

id description
K20161 DENND2; DENN domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615886.2 False 2010 mRNA 0.51 14 45546593 45569713
XM_036988135.1 False 1951 mRNA 0.51 13 45546593 45569714
XM_021615885.2 False 2434 mRNA 0.51 17 45546593 45580960
XM_021615884.2 True 2440 mRNA 0.51 17 45546593 45580976

Neighbor

gene id symbol gene type direction distance location
LOC110532194 LOC106572173 coding downstream 32614 45497891 ~ 45513979 (-)
pdyn pdyn coding downstream 227829 45316564 ~ 45318766 (-)
rtel1 rtel1 coding downstream 265129 45225205 ~ 45281464 (-)
LOC100136637 LOC100329213 coding downstream 322214 45222679 ~ 45224379 (-)
LOC110532180 LOC106572190 coding downstream 676302 44863031 ~ 44870291 (-)
igf3 LOC106572168 coding upstream 33156 45614132 ~ 45625268 (-)
si:dkeyp-110g5.4 LOC106572167 coding upstream 46750 45627726 ~ 45632526 (-)
lrif1 lrif1 coding upstream 60612 45641588 ~ 45654561 (-)
efhd2 efhd2 coding upstream 105088 45686064 ~ 45715162 (-)
fhad1 LOC106572164 coding upstream 138634 45719588 ~ 45755572 (-)
G809176 NA non-coding downstream 77985 45464767 ~ 45468608 (-)
G809123 NA non-coding downstream 179785 45366607 ~ 45366808 (-)
G809122 NA non-coding downstream 182419 45363966 ~ 45364174 (-)
G809071 LOC106572179 non-coding downstream 247853 45295856 ~ 45298740 (-)
G808994 NA non-coding downstream 291377 45254078 ~ 45255216 (-)
G809358 NA non-coding upstream 42298 45623274 ~ 45623513 (-)
G809353 NA non-coding upstream 44864 45625840 ~ 45627137 (-)
G809403 NA non-coding upstream 137191 45718167 ~ 45718913 (-)
G809408 NA non-coding upstream 148755 45729731 ~ 45729962 (-)
G808375 NA other downstream 909747 44634559 ~ 44636846 (-)
G807941 NA other downstream 1184427 44361416 ~ 44362166 (-)
tafa5l LOC106572193 other downstream 1254481 44247091 ~ 44292397 (-)
zmynd12 zmynd12 other upstream 606288 46187156 ~ 46200250 (-)
G810563 NA other upstream 672538 46253514 ~ 46256922 (-)
G811300 NA other upstream 1597828 47178804 ~ 47181797 (-)
LOC110531190 clcn6 other upstream 2082089 47642136 ~ 47676649 (-)
LOC110532252 fkb1a other upstream 2697198 48278174 ~ 48286453 (-)

Expression


Co-expression Network