ela2 (LOC106572326)


Basic Information

Item Value
gene id ela2
gene name LOC106572326
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45760116 ~ 45764018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988139.1
TTTTCTACTACTCTCCAGCTATATAAGGGAGCAGGTTCAGCTGACATTCACTTAAACTGTCATCATGAAGTTTGTGATCTTGGCTTTGTTTGTTGCTGGTGCCTACGGATGTGGGCTGCCCACCTTCCCCCCTATCATCACCAGGGTGGTCGGAGGAGAGGATGTCCGTGAGAACAGCTGGCCCTGGCAGGTGTCTCTTCAGTACCAATCTGGTAGCAACTTCCACCACACCTGTGGCGCCACTCTGATCTCCAGCCAATGGGTCATGACCGCTGCTCACTGCATCAACAGCCGCAACACCTACAGGGTATACCTGGGCAAGCACAACCTGAAGAACAACAACGAGGAGGGTTCCATGGCTCTTACTCCCGCCAAGATCATCGTCCATGAGAACTGGGATTCCTACAGAATCCGTAACGACATTGCCCTGATCAAGCTTCAGAGCCCTGTCACCTTCTCTGACTCTGTCATGGCGGCCTGTCTGCCCGACTCCGGCATCGTCCTGCCCCACAATGCTCCCTGCTACGTCACTGGCTGGGGACGCCTCTGGACTGGAGGCCCCATCGCTGACGTACTGCAGCAGGCCCTCCTGCCCGTGGTCAGCCATGCCAACTGCACCAAGCCCGACTGGTGGGGCAGCCTTGTTACCAGCAGCATGGTctgtgctggtggtgatggagaccTTGCTAGCTGCAACGGAGACTCCGGTGGCCCCCTGAACTGCCAGAACTCTGATGGCTCCTGGGATGTTCACGGTGTGGTGAGCTTTGGCTCCAGCATGGGCTGCAACTACCCCAAGAAGCCCTCCGTCTTCACCCGCGTCAGTGCCTACATTTCCTGGATCAACAACgTGATGACCAGCAACTAAATGATGGATCTGGTTGTATCGTGGTGGGCAGCTGtcattaaataaatacatgtattgCAAATATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988139.1 True 933 mRNA 0.55 8 45760116 45764018

Neighbor

gene id symbol gene type direction distance location
fhad1 LOC106572164 coding downstream 4544 45719588 ~ 45755572 (-)
efhd2 efhd2 coding downstream 44954 45686064 ~ 45715162 (-)
lrif1 lrif1 coding downstream 105555 45641588 ~ 45654561 (-)
si:dkeyp-110g5.4 LOC106572167 coding downstream 127590 45627726 ~ 45632526 (-)
igf3 LOC106572168 coding downstream 134848 45614132 ~ 45625268 (-)
tmem51a LOC106572162 coding upstream 29191 45793209 ~ 45805864 (-)
LOC110532208 LOC106572161 coding upstream 52256 45816274 ~ 46041265 (-)
zmynd12 zmynd12 coding upstream 423138 46187156 ~ 46200250 (-)
LOC110532213 emp3 coding upstream 438708 46202726 ~ 46206704 (-)
LOC110532215 LOC106572154 coding upstream 494017 46256999 ~ 46263834 (-)
G809424 NA non-coding downstream 521 45759298 ~ 45759595 (-)
G809421 NA non-coding downstream 5634 45754236 ~ 45754482 (-)
G809410 NA non-coding downstream 28470 45731370 ~ 45731646 (-)
G809408 NA non-coding downstream 30154 45729731 ~ 45729962 (-)
G809427 NA non-coding upstream 7318 45771336 ~ 45772370 (-)
G809705 NA non-coding upstream 22411 45786429 ~ 45786831 (-)
G809881 NA non-coding upstream 259157 46023175 ~ 46054854 (-)
G809917 NA non-coding upstream 311923 46075941 ~ 46076508 (-)
G809937 NA non-coding upstream 337833 46101851 ~ 46102054 (-)
pdyn pdyn other downstream 441350 45316564 ~ 45318766 (-)
G809071 LOC106572179 other downstream 462266 45295856 ~ 45298740 (-)
G808375 NA other downstream 1123270 44634559 ~ 44636846 (-)
G807941 NA other downstream 1397950 44361416 ~ 44362166 (-)
tafa5l LOC106572193 other downstream 1468004 44247091 ~ 44292397 (-)
G810563 NA other upstream 489496 46253514 ~ 46256922 (-)
G811300 NA other upstream 1414786 47178804 ~ 47181797 (-)
LOC110531190 clcn6 other upstream 1899047 47642136 ~ 47676649 (-)
LOC110532252 fkb1a other upstream 2514156 48278174 ~ 48286453 (-)

Expression


Co-expression Network