tmem51a (LOC106572162)


Basic Information

Item Value
gene id tmem51a
gene name LOC106572162
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 45793209 ~ 45805864 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615902.2
TTTGCCCGTTCACGTCACCGTCCATAGACGGATGCACCCCAAATTGCGGAAGTTCAGCGTTACAGCGTGATTAAAATGTAACGGCAATGTTCCTTCATTAGCGGAGACTACATTCACGaacaagataaaacaagcTGAATCGCGCTGCCTCCCAGGCGTGAACCAGGTGCCCAACTCTGTCTGACTGCGAAGTTGGCTCAAAATTAAGGAGACTTAATTAAGCACGTGTAGTTGTGAGTAAGATTCTGTGTTTTCccatgcaaaagtgattgcttttgataTACATGCTTTATCTGCCTTGCCAATAAAACCTTGTTTGAAAATTCAAACATAGTCTATATTTTAACGTAAAGAGAGGTTGTAGCTTTTATTTTTTGGGGACGCTGCACCATgttgccttgttgacaacatgactgAGTGACGCAGATTTCTGTTTATTGAGAAAAGCGCTCTTCCCTTGTTCACATCACGGGCCATAGACCAGTGTCCCGCAGTTCAGCATAATCGAATCCGCCCAATGTTGCTCTCAATCGGCTCACGGCCTTTTGCCCCATTGAACCGCGCGCATGTTTTTTGTGACGTGATCACATGAATCGTCTATAGGTCCGTCGAATAAAGTTTCTGGTTAGAAATGTGGCTTGATTAGTATATTTCCAAGATATAGCTAGGCTACGTACAGTAATTCCCTTGATCGCGGGTGATCAACTTCgaagaaagaaaacactttggaATGTATCGTCAGCATGCAAAGTCTTTGACCCCAGGTGTGAAGCAGCTAGCTGACCTAGCTGAACACTAGGTGGGCCTACGTTTTGGGGAAAATGCTCTCCAGCGTTGAGGTGCCCCCAAACCGCCCTGTTGCCAGCAACCACCAAAACAGTCCCGGAAACTCAGGTTCCCAGTATGCCTTGTGTGCCCTGGGGGTGGGACTGGTAGCCCTGGGCATTGTCATGATCGTATGGAGTGTGGTGCCCTCCGACATGGCCGGGAACAACAGCAGTGGCACCGGAGGAGGGAACCCGAAACCGGACACTAGGGGGAGGACTTCATCGGTGGCCTTTGTACTGGTCGGGGCTGGAGTGGCCATGCTCCTGCTGTCCCTGTGCCTGGGGATGAGGAACAAGCAGCGGGAGCAGCAGGTGCTCCTAGAGGCCCAGACTCTGGGGGCAGGCAACGTAGCTACCAGTGAGGACGACGGAGAGACGGCAGAGGAGCGAGCCCAGAGGTACACTGTGCCCAGCTACGAGGAGGTGGTAGGCAGCGGCGAGTACCCCATACGCCAGAGCAACTTGCGCCAcagctcctcccagctgccctccTACGACGACCTGGTGGACGGTGTGCAGATGGAGCAGGAAGGGTCAGATGCCACCCAGACGTCACCCGCTTCCACTAACCCTGCCTCCTCTGCTGTGCCTAACCGCCGCACTGGGCGAACGGGCCTCAAGCTCCTTCCCCTTAAGATCCGGAGGATTAAATCGGAGAAGCTCTTTATGAATAACACGGATAACTCTCAGCCACCGGGAGGGATCACTATTGAGCCGCTCACTCCGCCACCAATGTATGAGGACAAAGCACCCCAGCTCTGAGACTTGGTACCTTCTAGGTTTCAAAGCAGGTTACTGAAGCCGCTGTGTCCCACTAGGCGTGAATTGGTTGTGCAGTGCTACTATAGATGTGATCAGATGGCCCTTGTCATGCATCTGTGGTTAAATCATCTCGATGGCACTTGTCATGCCTACCTGGCTGAGGACTTTTCTTTAGACCTGCAACTCAAGCGCAGTGAGTACTGTTCCATACGTGGGGCACTGGCATTTGAGTAGATCTTTGGGGCAACTCTAATGTTGCTGGACAGAGGGAACACCTGGACAGAGAGTACACATCCAATTTCCGACTATGATTACAAGGACATTGAAGCTTGGTTTAAAGGATCAATATTATTGGGGGAAATTCTCGGCATGTCTTGGATGCCTTTTATTCCTTTCCAACGAGTACTGACACTGGTCCAAATCTTCTTTGTATGCAGATGACCATATTTTATTTTCCTCTGTCTGCTATATTATTTCAAGTTCCGTCTTCATCCTCAGTCTAGtcgtgttatagatgtattatttATGTCTGagttttgtattctgtacagctACTTAGACAGCAGCTCCTCACATTTTGAGAGAAGTGCTATTTGGCGACTGACTCAATGGCCACCTTACTCAgacagtgtttgtgtgttactGCCTGTGTTGCTCGTCAATAGAGGACAATTGAGAGAGACCGAGGCTCATGGGTAGTTAGAAGCCTTTGCCCTGTAGCCATGGTGAAATGGGGTTGGGCTCTGAAGGCAGTAGTGTAGTCCAGctcttttccttttttttttttttctcaatagaGGAGAACACAAGGGGGACTTTCTCTGAGCAGCTGGGAGCTGGGATAATGGCAGCCATTGCTCACTCACTCATCACTCTTGAACTATTCTTCACTAGCTCCTTGACTGGCAGCACTTTCATTAGGAGTATTCAGAGAATGAACTTCTGGTGTCCATGGTTTGACCCCATTTTTGTTTAGTGGAGCGAAAATACATCAGTACCTTTATCTCTCTAGCCTGTTTGTTTTATGCTTATGAGAGTATGGAAATTAGCGAgtccatgaagtgttttgaagtTAAGAATGTTATTTTCTTATCATGCGGATACTATTTTCTGATGTCATGTTGATGAACCTGTTCAACAACTATTCACTACTTTTTAGATGGGAACACAAACTGTACACAACAGTAGCCTTTTTTGTGTAACTGAACACTTAATAAACTAGCAAATGCATACCTATGCACACAGAA
>XM_021615903.2
AAGTGCACCTCTCCCTCACCGCTTTTGCCCGTTCACGTCACCGTCCATAGACGGATGCACCCCAAATTGCGGAAGTTCAGCGTTACAGCGTGATTAAAATGTAACGGCAATGTTCCTTCATTAGCGGAGACTACATTCACGTCTTTGACCCCAGGTGTGAAGCAGCTAGCTGACCTAGCTGAACACTAGGTGGGCCTACGTTTTGGGGAAAATGCTCTCCAGCGTTGAGGTGCCCCCAAACCGCCCTGTTGCCAGCAACCACCAAAACAGTCCCGGAAACTCAGGTTCCCAGTATGCCTTGTGTGCCCTGGGGGTGGGACTGGTAGCCCTGGGCATTGTCATGATCGTATGGAGTGTGGTGCCCTCCGACATGGCCGGGAACAACAGCAGTGGCACCGGAGGAGGGAACCCGAAACCGGACACTAGGGGGAGGACTTCATCGGTGGCCTTTGTACTGGTCGGGGCTGGAGTGGCCATGCTCCTGCTGTCCCTGTGCCTGGGGATGAGGAACAAGCAGCGGGAGCAGCAGGTGCTCCTAGAGGCCCAGACTCTGGGGGCAGGCAACGTAGCTACCAGTGAGGACGACGGAGAGACGGCAGAGGAGCGAGCCCAGAGGTACACTGTGCCCAGCTACGAGGAGGTGGTAGGCAGCGGCGAGTACCCCATACGCCAGAGCAACTTGCGCCAcagctcctcccagctgccctccTACGACGACCTGGTGGACGGTGTGCAGATGGAGCAGGAAGGGTCAGATGCCACCCAGACGTCACCCGCTTCCACTAACCCTGCCTCCTCTGCTGTGCCTAACCGCCGCACTGGGCGAACGGGCCTCAAGCTCCTTCCCCTTAAGATCCGGAGGATTAAATCGGAGAAGCTCTTTATGAATAACACGGATAACTCTCAGCCACCGGGAGGGATCACTATTGAGCCGCTCACTCCGCCACCAATGTATGAGGACAAAGCACCCCAGCTCTGAGACTTGGTACCTTCTAGGTTTCAAAGCAGGTTACTGAAGCCGCTGTGTCCCACTAGGCGTGAATTGGTTGTGCAGTGCTACTATAGATGTGATCAGATGGCCCTTGTCATGCATCTGTGGTTAAATCATCTCGATGGCACTTGTCATGCCTACCTGGCTGAGGACTTTTCTTTAGACCTGCAACTCAAGCGCAGTGAGTACTGTTCCATACGTGGGGCACTGGCATTTGAGTAGATCTTTGGGGCAACTCTAATGTTGCTGGACAGAGGGAACACCTGGACAGAGAGTACACATCCAATTTCCGACTATGATTACAAGGACATTGAAGCTTGGTTTAAAGGATCAATATTATTGGGGGAAATTCTCGGCATGTCTTGGATGCCTTTTATTCCTTTCCAACGAGTACTGACACTGGTCCAAATCTTCTTTGTATGCAGATGACCATATTTTATTTTCCTCTGTCTGCTATATTATTTCAAGTTCCGTCTTCATCCTCAGTCTAGtcgtgttatagatgtattatttATGTCTGagttttgtattctgtacagctACTTAGACAGCAGCTCCTCACATTTTGAGAGAAGTGCTATTTGGCGACTGACTCAATGGCCACCTTACTCAgacagtgtttgtgtgttactGCCTGTGTTGCTCGTCAATAGAGGACAATTGAGAGAGACCGAGGCTCATGGGTAGTTAGAAGCCTTTGCCCTGTAGCCATGGTGAAATGGGGTTGGGCTCTGAAGGCAGTAGTGTAGTCCAGctcttttccttttttttttttttctcaatagaGGAGAACACAAGGGGGACTTTCTCTGAGCAGCTGGGAGCTGGGATAATGGCAGCCATTGCTCACTCACTCATCACTCTTGAACTATTCTTCACTAGCTCCTTGACTGGCAGCACTTTCATTAGGAGTATTCAGAGAATGAACTTCTGGTGTCCATGGTTTGACCCCATTTTTGTTTAGTGGAGCGAAAATACATCAGTACCTTTATCTCTCTAGCCTGTTTGTTTTATGCTTATGAGAGTATGGAAATTAGCGAgtccatgaagtgttttgaagtTAAGAATGTTATTTTCTTATCATGCGGATACTATTTTCTGATGTCATGTTGATGAACCTGTTCAACAACTATTCACTACTTTTTAGATGGGAACACAAACTGTACACAACAGTAGCCTTTTTTGTGTAACTGAACACTTAATAAACTAGCAAATGCATACCTATGCACACAGAA

Function

NR:

description
transmembrane protein 51-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615902.2 False 2836 mRNA 0.48 4 45793209 45805841
XM_021615903.2 True 2226 mRNA 0.50 3 45793209 45805864

Neighbor

gene id symbol gene type direction distance location
ela2 LOC106572326 coding downstream 29191 45760116 ~ 45764018 (-)
fhad1 LOC106572164 coding downstream 37637 45719588 ~ 45755572 (-)
efhd2 efhd2 coding downstream 78047 45686064 ~ 45715162 (-)
lrif1 lrif1 coding downstream 138648 45641588 ~ 45654561 (-)
si:dkeyp-110g5.4 LOC106572167 coding downstream 160683 45627726 ~ 45632526 (-)
LOC110532208 LOC106572161 coding upstream 10410 45816274 ~ 46041265 (-)
zmynd12 zmynd12 coding upstream 381292 46187156 ~ 46200250 (-)
LOC110532213 emp3 coding upstream 396862 46202726 ~ 46206704 (-)
LOC110532215 LOC106572154 coding upstream 452171 46256999 ~ 46263834 (-)
alas2 alas2 coding upstream 499595 46305459 ~ 46317525 (-)
G809705 NA non-coding downstream 6378 45786429 ~ 45786831 (-)
G809427 NA non-coding downstream 20839 45771336 ~ 45772370 (-)
G809424 NA non-coding downstream 33614 45759298 ~ 45759595 (-)
G809421 NA non-coding downstream 38727 45754236 ~ 45754482 (-)
G809410 NA non-coding downstream 61563 45731370 ~ 45731646 (-)
G809881 NA non-coding upstream 217311 46023175 ~ 46054854 (-)
G809917 NA non-coding upstream 270077 46075941 ~ 46076508 (-)
G809937 NA non-coding upstream 295987 46101851 ~ 46102054 (-)
G809940 NA non-coding upstream 300498 46106362 ~ 46106586 (-)
G809966 NA non-coding upstream 333992 46139856 ~ 46140104 (-)
pdyn pdyn other downstream 474443 45316564 ~ 45318766 (-)
G809071 LOC106572179 other downstream 495359 45295856 ~ 45298740 (-)
G808375 NA other downstream 1156363 44634559 ~ 44636846 (-)
G807941 NA other downstream 1431043 44361416 ~ 44362166 (-)
tafa5l LOC106572193 other downstream 1501097 44247091 ~ 44292397 (-)
G810563 NA other upstream 447650 46253514 ~ 46256922 (-)
G811300 NA other upstream 1372940 47178804 ~ 47181797 (-)
LOC110531190 clcn6 other upstream 1857201 47642136 ~ 47676649 (-)
LOC110532252 fkb1a other upstream 2472310 48278174 ~ 48286453 (-)

Expression


Co-expression Network