XLOC_026715 (il21r.1)


Basic Information

Item Value
gene id XLOC_026715
gene name il21r.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 45343782 ~ 45361573 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052019
CCCCCGAAGAGTCACGTCTACACAACAGGAAAGTCCTTAGTTGGTCTCATGGAGGCGGAGCCTAGTATGCGCCTGCTTTACCACAACCACATCCACTCAGTCTTTCTTCACAAGCTCTCTGACTGTGCGTGTAGATGGGCAGATTGACACAGTGTAAATGTCACCATGCTATGCACAACTGCTATTTGATTATAAACTGGATCATTTTGGATATTCATTCTTGTAAATTGGTTCAATGGGAATATTATTAAGTGTGCATGTGGCCTCTGTACAATGCATTTGAGCAGGGCTGACCACAGTTTCTTTCCCTCTTCCTCCATGATGGCTTCATGGCGAGCCACATTCTTGCTTGTTGTTTGTGGACTTCTACAGTGCTATGATGCTGCATGCAGTGTGAACTGCACCACAGACTTCATCTCAGCGCTCAACTGCTCTGCTTCTGACTTGACAGGAACAGCTTCATGTGATGTTGTGGCCAGTTGCAGGGATGAGTTTTCAACTGTCAATGGAAGCTGCAGCATCAGATCACCACAGTCCTGGTGCACTATGGAGCCCTATGAACTGGAGTCGATCATGTCTTTCGATACCAACTGCTTCATCACTGTAACACAAATGGACAAAGAAGGCGATATGGAGATCCCAACTCAGAGATACTCTAAAAATATCGTTTTATACAAATCTAcTAAACCAAAGCAACCATTCAACCTCACAATTAGGAACATTGACGGTGGTTTTAACCTCACTTGGGATGTGGCTTATACAGATAACGTTCTGTACGAAAAGTTGATCTACAGAGTAAGAGTACTATCTAAAAGCTCCCCAGAGAAGGAGAACATTTACACCCTGCAGCAGAACCAGCAATCAATGGTGATCCTCAGTGAAAAACTGCAACCAGGACTGCAACATGTTGCAGATGTTCAGGTTGCTGTGAATCCAGAGTGGTTCCCCTCTATGTGGAGCGAATGGAGTGACAGTGTTGAATGGGGGGTCGAATCTCCACAGTCTCCAGAACAGTACTATTTCGTTCTGTTGGCGATTCCTATTGCGATTATTTTGGCGCTGCTGCTTGTGTTCAGTGGGAAACTAGGGGGCATCAAGAAGCTGACTTTTCAACACATCCCAAGCCCGCAAGAGTACTTCACACCCCTCTATCACACGTATCAAGGAGACTTTAAGAAATGGGTCGGACCAGTCCTGACCTTCAACAACTTTGATGTCCTGGAGAAAAGCACCCTGCTGCAGGTGCTTTGTGAGAAGCAGCAGAACCAGAGCCCTGAGGAGCCTGCTAACAACCAGAGCGGTGAAAGGGACTTCGGTCAGGAGGGTCAAAGCGCATCTAAACTCTACTTCCTGGAAAACAGCAGCCAGGAACACTCCGGCGGGCACATATCGATAGACACAGTCACGGTTTCTGATCAGGAGGGCATCATGGGAGACTGGTCAGGAAACAGCCGTAGACAGAGCCTCGATGGCTTCGTTAACGCCAATCAGAGAGCGCCTGAAATCGACCAACCTCTTCAACGGGCCGCCAGCGGGAGCTTACAGGGCTCAGACTTTGACTGGCATCTACAAGAGCACGATCTGGAGAACATGGAGCAGGTTTCGCTGGACTCTTACAGCTCTAATGAGCAGTCCGATGATGGTTACCCACAAATGGGGTTGGATCTGGACACCATAGACAGTGGGTTTCTGGAGTCGGAGTGTTCGAGCCCGTCAGCGTTTGATGGGAACGAGCAGATAGAGACTGCATCGCTTGATGGCGTGGAAGGCTCCCATTCAAATTACGTCAAACAGTGGGTGGCTTTCACAGCCGTTCAAGTCGAAGCCCACAGCTCTGGAAACTAGCTGCTCATGGAGTTTCTATTACTACATCGTGGAGGAAGCATCTACTAAAGATCACAGTTTGGAATAACTTTGCTCATGGTACTGCATGTGAGATGATTCTCCTTACACTGAACTGGCATAACCCTGCAAAATGGGCTTGTTTCAATTTGTTTGATTGCACATTAGGACAGCGTGTGCCTGCATCTCATTTGCATAATTTCAGTCCTATAGGCCTATAGTCAGAGGCTGTGCTACAAATAATCGCTATTTGTCTCTCTGTTGGTacatttttgttgctgttgttgtgctttttactttgatttttctgtaatatattgtAATGGTTGATTCTGAATGACCTAAACATGAACTTTTGTGGCAACAGTAATGAACAGCATCGAAACTAACTCGTCAAATCCTCCCTTTACAAGTCTGTTTTGCACTTTAAAACGttctttcactttctctttcatTCACTTCTAATTGTTAAACTACATTCTATGATTTCTGTTCACACCTCAATGTAGgagaaaatgaaattaatatgATCAGAAATAAAATCACAACTGTAAAA

Function

symbol description
il21r.1 Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in B-cell lymphoma (multiple); Crohn's disease; autoimmune disease (multiple); human immunodeficiency virus infectious disease; and immunodeficiency 56. Orthologous to human IL21R (interleukin 21 receptor).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080108-6 Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in B-cell lymphoma (multiple); Crohn's disease; autoimmune disease (multiple); human immunodeficiency virus infectious disease; and immunodeficiency 56. Orthologous to human IL21R (interleukin 21 receptor).

Ensembl:

ensembl_id ENSDARG00000069961

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052019 True 2398 mRNA 0.45 8 45343782 45361573

Neighbor

gene id symbol gene type direction distance location
XLOC_026714 il21r.2 coding downstream 16885 45315477 ~ 45326897 (-)
XLOC_026713 pdpk1a coding downstream 35388 45283391 ~ 45308394 (-)
XLOC_026712 kctd5a coding downstream 62432 45261387 ~ 45281350 (-)
XLOC_026711 usp31 coding downstream 92858 45195219 ~ 45250924 (-)
XLOC_026710 hs3st4 coding downstream 590457 44541322 ~ 44753325 (-)
XLOC_026716 NA coding upstream 178213 45539786 ~ 45543451 (-)
XLOC_026717 h3f3b.1 coding upstream 414797 45776370 ~ 45778123 (-)
XLOC_026718 si:ch211-66h3.4 coding upstream 457053 45818626 ~ 45822914 (-)
XLOC_026719 NA coding upstream 470504 45832077 ~ 45843700 (-)
XLOC_026720 igfals coding upstream 483434 45845007 ~ 45848257 (-)
XLOC_026709 NA non-coding downstream 1007929 44332747 ~ 44335853 (-)
XLOC_026708 NA non-coding downstream 1219412 44111545 ~ 44124370 (-)
XLOC_026703 BX682557.1 non-coding downstream 1454339 43878456 ~ 43889443 (-)
XLOC_026702 BX682557.2 non-coding downstream 1468653 43866785 ~ 43875129 (-)
XLOC_026695 NA non-coding downstream 2154697 43187194 ~ 43189085 (-)
XLOC_026722 NA non-coding upstream 791554 46153127 ~ 46217473 (-)
XLOC_026723 CR450782.1 non-coding upstream 863016 46224589 ~ 46227010 (-)
XLOC_026726 NA non-coding upstream 1101012 46462585 ~ 46463256 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000046_01246234_01251650 NA coding CI01000046 null 1245732 ~ 1251689 (+)