Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966055 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 46301264 ~ 46304747 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tetratricopeptide repeat protein 34-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036988151.1 | True | 1957 | mRNA | 0.50 | 3 | 46301264 | 46304747 |
46,300,000
46,301,000
46,302,000
46,303,000
46,304,000
46,305,000
46,305,000
46,306,000
46,307,000
46,308,000
46,309,000
46,310,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532217 | LOC106572155 | coding | upstream | 23359 | 46263207 ~ 46277905 (+) |
| ccdc30 | ccdc30 | coding | upstream | 51321 | 46207396 ~ 46249943 (+) |
| LOC110532211 | LOC106572158 | coding | upstream | 115661 | 46158949 ~ 46185603 (+) |
| ela2l | LOC106572163 | coding | upstream | 526256 | 45771365 ~ 45775008 (+) |
| LOC110532198 | dram2 | coding | upstream | 754771 | 45541443 ~ 45546493 (+) |
| LOC118966056 | NA | coding | downstream | 4265 | 46309012 ~ 46310775 (+) |
| LOC110532219 | LOC106572152 | coding | downstream | 13409 | 46318156 ~ 46354342 (+) |
| LOC110532220 | LOC106572151 | coding | downstream | 56266 | 46361013 ~ 46371475 (+) |
| LOC110532221 | LOC106572324 | coding | downstream | 82086 | 46386833 ~ 46389138 (+) |
| LOC110532224 | LOC106572149 | coding | downstream | 297067 | 46601814 ~ 46630668 (+) |
| G810076 | NA | non-coding | upstream | 6052 | 46294946 ~ 46295212 (+) |
| G810059 | NA | non-coding | upstream | 36362 | 46264410 ~ 46264902 (+) |
| G810057 | NA | non-coding | upstream | 39207 | 46261772 ~ 46262057 (+) |
| G810056 | LOC105013805 | non-coding | upstream | 39524 | 46261501 ~ 46261740 (+) |
| G810030 | NA | non-coding | upstream | 43182 | 46257728 ~ 46258082 (+) |
| G810017 | alas2 | non-coding | downstream | 685 | 46305432 ~ 46316331 (+) |
| G810016 | NA | non-coding | downstream | 34246 | 46338993 ~ 46433129 (+) |
| G810112 | NA | non-coding | downstream | 88410 | 46393157 ~ 46394599 (+) |
| G810243 | NA | non-coding | downstream | 262566 | 46567313 ~ 46567630 (+) |
| G810247 | NA | non-coding | downstream | 274954 | 46579701 ~ 46585007 (+) |
| G809685 | NA | other | upstream | 165532 | 46134731 ~ 46135732 (+) |
| G807841 | NA | other | upstream | 1848187 | 44442662 ~ 44453077 (+) |
| G807677 | NA | other | upstream | 2105223 | 44195715 ~ 44196041 (+) |
| G805600 | NA | other | upstream | 3952478 | 42346176 ~ 42348786 (+) |
| G805451 | NA | other | upstream | 3968826 | 42332093 ~ 42332438 (+) |
| G812143 | NA | other | downstream | 1677254 | 47982001 ~ 47982301 (+) |
| G812688 | LOC106572106 | other | downstream | 2240707 | 48545454 ~ 48570593 (+) |
| G813071 | NA | other | downstream | 2655002 | 48959749 ~ 48959991 (+) |
| G813074 | etbr2 | other | downstream | 2698572 | 48962187 ~ 49006710 (+) |
| G813139 | NA | other | downstream | 2810390 | 49115137 ~ 49115618 (+) |
