LOC118966056


Basic Information

Item Value
gene id LOC118966056
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 46309012 ~ 46310775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053263.1
taggctgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaagattgaattaaaaatgtatttaataaatgACCGGCATTAATTGGTTAAATGTGACCTCTTCCAGGGGAGACTCACTTGGCTCAATCAAATCTCTCTCTGCTGTGAGGGGCATTTCCCTAGCTCTGTGACAAgctaagacagacagagaccaaatGGTTATAGCCATGATGGAACCTGCTTCATTGCAAGTGAGCCATGGGCAAGAGGAAGCACCAATAAATAGTACAGAATAAAATGCAATACAACATGCTTGGAGACCCGGGAGGGCCCTGGATTTAGGCTAACCTGGCAGCATTTTGGCCAGGGTGAAGAGGGTGGAGTCGTTGGCAACGAAGCAGGATGAGAAGACCAAAGCTCCGTCTTTCTGGTGGAGCTGGGAC

Function

NR:

description
5-aminolevulinate synthase, erythroid-specific, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053263.1 True 436 mRNA 0.44 3 46309012 46310775

Neighbor

gene id symbol gene type direction distance location
LOC118966055 NA coding upstream 4265 46301264 ~ 46304747 (+)
LOC110532217 LOC106572155 coding upstream 31107 46263207 ~ 46277905 (+)
ccdc30 ccdc30 coding upstream 59069 46207396 ~ 46249943 (+)
LOC110532211 LOC106572158 coding upstream 123409 46158949 ~ 46185603 (+)
ela2l LOC106572163 coding upstream 534004 45771365 ~ 45775008 (+)
LOC110532219 LOC106572152 coding downstream 7381 46318156 ~ 46354342 (+)
LOC110532220 LOC106572151 coding downstream 50238 46361013 ~ 46371475 (+)
LOC110532221 LOC106572324 coding downstream 76058 46386833 ~ 46389138 (+)
LOC110532224 LOC106572149 coding downstream 291039 46601814 ~ 46630668 (+)
LOC110532227 LOC106572146 coding downstream 328619 46639394 ~ 46642882 (+)
G810083 NA non-coding upstream 5848 46302964 ~ 46303164 (+)
G810076 NA non-coding upstream 13800 46294946 ~ 46295212 (+)
G810059 NA non-coding upstream 44110 46264410 ~ 46264902 (+)
G810057 NA non-coding upstream 46955 46261772 ~ 46262057 (+)
G810056 LOC105013805 non-coding upstream 47272 46261501 ~ 46261740 (+)
G810016 NA non-coding downstream 28218 46338993 ~ 46433129 (+)
G810112 NA non-coding downstream 82382 46393157 ~ 46394599 (+)
G810243 NA non-coding downstream 256538 46567313 ~ 46567630 (+)
G810247 NA non-coding downstream 268926 46579701 ~ 46585007 (+)
G810265 NA non-coding downstream 295698 46606473 ~ 46617960 (+)
G809685 NA other upstream 173280 46134731 ~ 46135732 (+)
G807841 NA other upstream 1855935 44442662 ~ 44453077 (+)
G807677 NA other upstream 2112971 44195715 ~ 44196041 (+)
G805600 NA other upstream 3960226 42346176 ~ 42348786 (+)
G805451 NA other upstream 3976574 42332093 ~ 42332438 (+)
G812143 NA other downstream 1671226 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2234679 48545454 ~ 48570593 (+)
G813071 NA other downstream 2648974 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 2692544 48962187 ~ 49006710 (+)
G813139 NA other downstream 2804362 49115137 ~ 49115618 (+)

Expression


Co-expression Network