Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966184 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 47108351 ~ 47111306 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053450.1 | True | 535 | mRNA | 0.46 | 3 | 47108351 | 47111306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532233 | samd11 | coding | upstream | 12950 | 47002142 ~ 47095401 (+) |
| LOC110532228 | LOC106572145 | coding | upstream | 396310 | 46657987 ~ 46712041 (+) |
| LOC110532227 | LOC106572146 | coding | upstream | 465469 | 46639394 ~ 46642882 (+) |
| LOC110532224 | LOC106572149 | coding | upstream | 477683 | 46601814 ~ 46630668 (+) |
| LOC110532221 | LOC106572324 | coding | upstream | 719213 | 46386833 ~ 46389138 (+) |
| klhl17 | LOC106572137 | coding | downstream | 38640 | 47149946 ~ 47181808 (+) |
| LOC110532236 | LOC106572136 | coding | downstream | 80429 | 47191735 ~ 47219174 (+) |
| LOC110532242 | kiaa2013 | coding | downstream | 468036 | 47579342 ~ 47589218 (+) |
| LOC110533017 | LOC106572130 | coding | downstream | 515026 | 47626332 ~ 47627942 (+) |
| LOC110533018 | LOC106572129 | coding | downstream | 524064 | 47635370 ~ 47636413 (+) |
| G811090 | NA | non-coding | upstream | 8003 | 47100114 ~ 47100348 (+) |
| G811029 | NA | non-coding | upstream | 9622 | 47098450 ~ 47098729 (+) |
| G811083 | NA | non-coding | upstream | 22796 | 47084394 ~ 47085555 (+) |
| G811071 | NA | non-coding | upstream | 45281 | 47060316 ~ 47063070 (+) |
| G811030 | NA | non-coding | upstream | 55223 | 47052556 ~ 47053128 (+) |
| G811067 | NA | non-coding | downstream | 2864 | 47114170 ~ 47115950 (+) |
| G811108 | NA | non-coding | downstream | 34490 | 47145796 ~ 47146413 (+) |
| G811161 | NA | non-coding | downstream | 140504 | 47251810 ~ 47252040 (+) |
| G811164 | NA | non-coding | downstream | 145517 | 47256823 ~ 47257061 (+) |
| G811168 | NA | non-coding | downstream | 149779 | 47261085 ~ 47261350 (+) |
| G809685 | NA | other | upstream | 972619 | 46134731 ~ 46135732 (+) |
| G807841 | NA | other | upstream | 2655274 | 44442662 ~ 44453077 (+) |
| G807677 | NA | other | upstream | 2912310 | 44195715 ~ 44196041 (+) |
| G805600 | NA | other | upstream | 4759565 | 42346176 ~ 42348786 (+) |
| G805451 | NA | other | upstream | 4775913 | 42332093 ~ 42332438 (+) |
| G812143 | NA | other | downstream | 870695 | 47982001 ~ 47982301 (+) |
| G812688 | LOC106572106 | other | downstream | 1434148 | 48545454 ~ 48570593 (+) |
| G813071 | NA | other | downstream | 1848443 | 48959749 ~ 48959991 (+) |
| G813074 | etbr2 | other | downstream | 1892013 | 48962187 ~ 49006710 (+) |
| G813139 | NA | other | downstream | 2003831 | 49115137 ~ 49115618 (+) |
