si:rp71-17i16.5 (LOC106572104)


Basic Information

Item Value
gene id si:rp71-17i16.5
gene name LOC106572104
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48626319 ~ 48636018 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616005.2
CTTCCTCTGTTAGGTTACCTATCAGTTTACAGTAAACTCTTATCACACCACAATAGAGGAACTCCTTATCAGGCCATTACAAGGATTTATTTCTCTTTGACTTGACTTATGGGTAGCAACTCAAAAAGGAATGAGGAAGTATCCAAGAATTACAGAAGgggaatgttttatttaactacgTACACACGGAGTCAGTCATTCATTGTTGCTGTGGTAAAGGAACTAGGAAGGACAAATCTGTTCAGGAGATTGAATGGCGACTGAATCAAACTCTGGTCAAGGCATCAGGGAATATGCAGATTTTGCAACAGATACGTCTGGAGCCAGCTGCTCTGAGAACAGCCTGGAGTTCATCTGTGAGTTACGCCCAGGTAAGGGCCTCCAGGCTGGGGAGAGGCAAGAGAAAGTCCTGGTAGTGGCGAGGCTACCAGCACAATGCAGTGTACATCAGCTACGTCTTCGTATCTGCATGCAAACTCAAGAGCTGAACTGCCATCCCGATCCATTAAGCCTGTTGGACCCTGAAAAGTTCATACTGCTTTACCCCAAGGGAGAGGACTGGTATGAGATCTTTGACGACTGCCAGGTTCTCCGGACTCTGGATGTACCATGGTCACGTGACTCCCGGGGACGGCAGGTAGCTTGCATAGTGGTGTCGCCTCAGCCAgatgacacagaggagaggcAGAGCCACCACCGTACCCTGGTCAACCTGATTGGCCATGACCTGGATACAGTAGCAGCAAATAGGCTCGGCGAGCTCAGCTTCACACGCAGGAAGCTGGCTTCTCCACGCCAGGAAGAGCTAAGAAGGCGGGATGCCAGGGCCTATGCAACAGAGCCATGGACCACCTCAGCCCCCTTCCCAAAAGTCCAGGAGGAACAGCTCAGCCGAAAGATATCAGTCACCATGCATCACAATGACGTGTGCTTCAGTGTAAAGGTGGATTTTAATATAACACCTGAAGGTCTCATAAAGGTCTTCCGAGAAATCATGGTAGACCATGCTCTGGAATGTGAGTCTGGTGACATGGTTCTCAAGGTCTGTGGCAGGGAGGAGTTCCTCTCTGGAGACTTCCCTTTCTCTGACTCCCTGTGGGTACGGCAGTGTCTGAAGTCCATGCAGGCGCTTCATCTGTCTGTGGTCCCCATGGCGCAGCTTGATGAGGACACTGTGAGGGCTGAAGACTGGCCCCTTGTGGACAGCTTCACTGGGCTTTCCAGCTCCCATGAGGAGCTGGCCCTGGAGGGAAAGGATGTGGACGACATCCTCATGATTTCACTCTGGGACTGCAACCGCAAGTTCAGAGTGAAGCTCCTGGGCTTCGACATACCCCAACCCCCTGGCAAGCCTCCTCAGTTCATCCACGTGGAGGCCTCTATCCTCTACGGGAGCAAGGTGGTAACCTCTGTTTGTTCCACACCCAAGGCCtttgctgatgaagttctgtggaACGAGTGGTTGGAGTTTGATATCCTCCTCAGGGATCTTCCCCGTGGAGCTAAGCTGGGCCTGACCATCAATGCTTGCACCCATGATAGCGCCGCAACAAAGGAATTCAAATCCCCAGCCTCTGGTCTTAAAGCTCCAGACTACCAGAGAGGGAAGGGAAAGCTGCTGTACTTTGTGAATCTCCTTCTGATAGACCACAGGTCCGTCCTCAGCCAAGGGCCACACACCCTTCACATGTGGGCCTATCCCGAGCTGGAGGAAGAGGCTTTTACCTATAAGGCGGATAAGCTTTCCTCTGCCACCAACCCAGACGTGGCAGAATCCATGGCTATCACCTTCCTCCTGGACCGCTACAGTTTCCCTGTGGTTCTCCCTCACAGCACAACCTCCCCTGGATCCTGCTCCCCTCTTGGTCAGTCTTTCCCCTCATCCTCACCCAACTCCAGCTTATCTGATAAAAGCCTGTCTCCCATCGCGAGCGACACGTTTGCCAGATCCTCCTCGTCCCCAGTGACCACAGACAGGGCCCGTCTGAGAAGGTTCAGGGAGGAGAGTGTCCAGTATGCCTCTAACCTCCCCCAGTTCCTGCGCAGCGTAGACTGGCTAAGACCCAGCTCTGTGCAGGATGTCCACTGGCTGCTGAGTCACTGGGAACCCCCAGACCTGGATGTCTCCGTGGCCCTGGAGCTGCTCAGTGTGGACTTTGCTGATGAGAGGGTCAGGAAGCTGGCTGTCCAGAGACTGGAGAGCTTGTCTAATGATGAGATGCTGAAATATCTGCTGCAGCTGGTGCAGACTCTCAAAGTGGAGCCTTACCATGACAGCTTCCTGGCTAGATTCCTCATCCAAAGGGCTCTCAGAAGCAAGAGGATTGGCCACTTCTTCTTCTGGTACCTGCGCAGTGAGGTGGAGGGCTGCCCGTTCTTCCGTCAGCGTATGGCTGTGGTGCTAGAGGCCTACCTGCTGGGCTGTGGCCAGGCCATGCTGAGCAGTTTCATCAACCAGGTGCAGGCTGTGGAGGCACTACATGAGGTGGCCAGTGTGGTCAAGAGACTCTACCCTGACAAGACGGACCTCCCATCCACAGCTGCCCAGAAGCTTCAGGAGCTCCTGAGGACATGTAATCTCCCATCAGACTTCCAAGTGCCCTTTGACCCACGCATCAGAGCAGGCAGAATCCTGCTGGACAGGTGCAAGGTTATGGCCTCCAAGAAGAAGCCTCTGTGGCTTGAGTTTTCCTCCATGGACTCTCCATGCCCCTCTGGTCCCCCTGTAGGCATCATCTTCAAACAGGGGGATGACCTCCGACAGGACATGCTGGTGATTCAGACACTGGTGGTGATGGATTCTATATGGCAGGAGAAATCACTGGATCTGAATCTTGTGCCCTATGGTTGCATCTCTACAGGATACAATATAGGCATGATAGAGATTGTGAGAGATGCCGTCACCATTGCTGCCCTGCAGAGGATCCAAGGAGGCACAACAGGAGCCTTCAAGAACGATGCCCTGTTTGAGTGGCTCAGGGGGAAGTGTCCACTCCAAGAGATTCACTATCAGGCTATGGAGAGGTTTGTTAACTCTTGTGCTGGATACTGCGTGGCCACGTATGTGATGGGGATAGGGGACCGCCACAATGACAACATCATGATTACAGACCAAGGGAATCTGTTTCACATTGACTTTGGCCACATCCTGGGGAACACCAAACGGTTCCTGGGGGTTAGCAGGGAGAGGGTCCCCTTTGTCCTCACTCCTGACTTCCTCTATGTCATGGGCAGGATCAAAGGTCAACCCAGTCTCTACTTCCAGAAGTTCAGGGACACATGTACCCAGGCCTACCTGTCCCTGCGCTCCCACTCTCGCCTGCTGGTGACCCTCTTCTCCCTCATGCTCTTGACGGGGATCCCTGAGCTCAGTGCTGCAGAGGACATGCGCTACCTCCGGGACGCACTGCAGGACGACAAGGGGGAGGACAACGCACGGGACCACTTCCACCAGCAGATAGCAAAGTGCGAGGAACTGGGCTGGACAGTTCAAGCCAACTGGTGGATCCACATGTTGGCTGGCATTAAGTAGAACCAACTTCCAGAAGCCCATTTATGCCTGAGATTCATGTGATTttgtcatttgtttttaaaccCAACAGAATCAGGTGTTACACAACAAACTGGCATTGACAGGATGTAGTACTCAAGTGTCAGGCCAAATTCAAATCCTGCATGAGGGAGGGTTGCTGTTCTCCACCTGTGCGATATGCTCCAGCTGACTAGAATAAATTGTGTTGATTCGAATAAATTGGTATGATAGCATGCGGACAATGTATGTCCTTAATGATATctgatttgaaatgatacaatgactatgaggttaaagtgcagactgtcagctttaatatATCGGGGGAACTATTTAGAAATTACAGAACTTTTTGTACATGGTAcgcccattttaggggaccaaattATTGGAAAAAATgtacttatgtgtattaaagtagtctaAAGTTTAGTATTGGGTCCCGTATTCCCagcacacaatgattacatcaagcatGTGACTCTAAAAAGTTGTTGggtgcatttgctgtttgttttggttgtgtttctgaTTATTttatgcccaatagaaatgaatggtaaa
>XM_021616004.2
TTCCTCTGTTAGGTTACCTATCAGTTTACAGTAAACTCTTATCACACCACAATAGAGGAACTCCTTATCAGGCCATTACAAGGATTTATTTCTCTTTGACTTGACTTATGGGTAGCAACTCAAAAAGGAATGAGGAAGTATCCAAGAATTACAGAAGgggaatgttttatttaactacgTACACACGGAGTCAGTCATTCATTGTTGCTGTGGTAAAGGAACTAGGAAGGACAAATCTGTTCAGTCTAGGAGATTGAATGGCGACTGAATCAAACTCTGGTCAAGGCATCAGGGAATATGCAGATTTTGCAACAGATACGTCTGGAGCCAGCTGCTCTGAGAACAGCCTGGAGTTCATCTGTGAGTTACGCCCAGGTAAGGGCCTCCAGGCTGGGGAGAGGCAAGAGAAAGTCCTGGTAGTGGCGAGGCTACCAGCACAATGCAGTGTACATCAGCTACGTCTTCGTATCTGCATGCAAACTCAAGAGCTGAACTGCCATCCCGATCCATTAAGCCTGTTGGACCCTGAAAAGTTCATACTGCTTTACCCCAAGGGAGAGGACTGGTATGAGATCTTTGACGACTGCCAGGTTCTCCGGACTCTGGATGTACCATGGTCACGTGACTCCCGGGGACGGCAGGTAGCTTGCATAGTGGTGTCGCCTCAGCCAgatgacacagaggagaggcAGAGCCACCACCGTACCCTGGTCAACCTGATTGGCCATGACCTGGATACAGTAGCAGCAAATAGGCTCGGCGAGCTCAGCTTCACACGCAGGAAGCTGGCTTCTCCACGCCAGGAAGAGCTAAGAAGGCGGGATGCCAGGGCCTATGCAACAGAGCCATGGACCACCTCAGCCCCCTTCCCAAAAGTCCAGGAGGAACAGCTCAGCCGAAAGATATCAGTCACCATGCATCACAATGACGTGTGCTTCAGTGTAAAGGTGGATTTTAATATAACACCTGAAGGTCTCATAAAGGTCTTCCGAGAAATCATGGTAGACCATGCTCTGGAATGTGAGTCTGGTGACATGGTTCTCAAGGTCTGTGGCAGGGAGGAGTTCCTCTCTGGAGACTTCCCTTTCTCTGACTCCCTGTGGGTACGGCAGTGTCTGAAGTCCATGCAGGCGCTTCATCTGTCTGTGGTCCCCATGGCGCAGCTTGATGAGGACACTGTGAGGGCTGAAGACTGGCCCCTTGTGGACAGCTTCACTGGGCTTTCCAGCTCCCATGAGGAGCTGGCCCTGGAGGGAAAGGATGTGGACGACATCCTCATGATTTCACTCTGGGACTGCAACCGCAAGTTCAGAGTGAAGCTCCTGGGCTTCGACATACCCCAACCCCCTGGCAAGCCTCCTCAGTTCATCCACGTGGAGGCCTCTATCCTCTACGGGAGCAAGGTGGTAACCTCTGTTTGTTCCACACCCAAGGCCtttgctgatgaagttctgtggaACGAGTGGTTGGAGTTTGATATCCTCCTCAGGGATCTTCCCCGTGGAGCTAAGCTGGGCCTGACCATCAATGCTTGCACCCATGATAGCGCCGCAACAAAGGAATTCAAATCCCCAGCCTCTGGTCTTAAAGCTCCAGACTACCAGAGAGGGAAGGGAAAGCTGCTGTACTTTGTGAATCTCCTTCTGATAGACCACAGGTCCGTCCTCAGCCAAGGGCCACACACCCTTCACATGTGGGCCTATCCCGAGCTGGAGGAAGAGGCTTTTACCTATAAGGCGGATAAGCTTTCCTCTGCCACCAACCCAGACGTGGCAGAATCCATGGCTATCACCTTCCTCCTGGACCGCTACAGTTTCCCTGTGGTTCTCCCTCACAGCACAACCTCCCCTGGATCCTGCTCCCCTCTTGGTCAGTCTTTCCCCTCATCCTCACCCAACTCCAGCTTATCTGATAAAAGCCTGTCTCCCATCGCGAGCGACACGTTTGCCAGATCCTCCTCGTCCCCAGTGACCACAGACAGGGCCCGTCTGAGAAGGTTCAGGGAGGAGAGTGTCCAGTATGCCTCTAACCTCCCCCAGTTCCTGCGCAGCGTAGACTGGCTAAGACCCAGCTCTGTGCAGGATGTCCACTGGCTGCTGAGTCACTGGGAACCCCCAGACCTGGATGTCTCCGTGGCCCTGGAGCTGCTCAGTGTGGACTTTGCTGATGAGAGGGTCAGGAAGCTGGCTGTCCAGAGACTGGAGAGCTTGTCTAATGATGAGATGCTGAAATATCTGCTGCAGCTGGTGCAGACTCTCAAAGTGGAGCCTTACCATGACAGCTTCCTGGCTAGATTCCTCATCCAAAGGGCTCTCAGAAGCAAGAGGATTGGCCACTTCTTCTTCTGGTACCTGCGCAGTGAGGTGGAGGGCTGCCCGTTCTTCCGTCAGCGTATGGCTGTGGTGCTAGAGGCCTACCTGCTGGGCTGTGGCCAGGCCATGCTGAGCAGTTTCATCAACCAGGTGCAGGCTGTGGAGGCACTACATGAGGTGGCCAGTGTGGTCAAGAGACTCTACCCTGACAAGACGGACCTCCCATCCACAGCTGCCCAGAAGCTTCAGGAGCTCCTGAGGACATGTAATCTCCCATCAGACTTCCAAGTGCCCTTTGACCCACGCATCAGAGCAGGCAGAATCCTGCTGGACAGGTGCAAGGTTATGGCCTCCAAGAAGAAGCCTCTGTGGCTTGAGTTTTCCTCCATGGACTCTCCATGCCCCTCTGGTCCCCCTGTAGGCATCATCTTCAAACAGGGGGATGACCTCCGACAGGACATGCTGGTGATTCAGACACTGGTGGTGATGGATTCTATATGGCAGGAGAAATCACTGGATCTGAATCTTGTGCCCTATGGTTGCATCTCTACAGGATACAATATAGGCATGATAGAGATTGTGAGAGATGCCGTCACCATTGCTGCCCTGCAGAGGATCCAAGGAGGCACAACAGGAGCCTTCAAGAACGATGCCCTGTTTGAGTGGCTCAGGGGGAAGTGTCCACTCCAAGAGATTCACTATCAGGCTATGGAGAGGTTTGTTAACTCTTGTGCTGGATACTGCGTGGCCACGTATGTGATGGGGATAGGGGACCGCCACAATGACAACATCATGATTACAGACCAAGGGAATCTGTTTCACATTGACTTTGGCCACATCCTGGGGAACACCAAACGGTTCCTGGGGGTTAGCAGGGAGAGGGTCCCCTTTGTCCTCACTCCTGACTTCCTCTATGTCATGGGCAGGATCAAAGGTCAACCCAGTCTCTACTTCCAGAAGTTCAGGGACACATGTACCCAGGCCTACCTGTCCCTGCGCTCCCACTCTCGCCTGCTGGTGACCCTCTTCTCCCTCATGCTCTTGACGGGGATCCCTGAGCTCAGTGCTGCAGAGGACATGCGCTACCTCCGGGACGCACTGCAGGACGACAAGGGGGAGGACAACGCACGGGACCACTTCCACCAGCAGATAGCAAAGTGCGAGGAACTGGGCTGGACAGTTCAAGCCAACTGGTGGATCCACATGTTGGCTGGCATTAAGTAGAACCAACTTCCAGAAGCCCATTTATGCCTGAGATTCATGTGATTttgtcatttgtttttaaaccCAACAGAATCAGGTGTTACACAACAAACTGGCATTGACAGGATGTAGTACTCAAGTGTCAGGCCAAATTCAAATCCTGCATGAGGGAGGGTTGCTGTTCTCCACCTGTGCGATATGCTCCAGCTGACTAGAATAAATTGTGTTGATTCGAATAAATTGGTATGATAGCATGCGGACAATGTATGTCCTTAATGATATctgatttgaaatgatacaatgactatgaggttaaagtgcagactgtcagctttaatatATCGGGGGAACTATTTAGAAATTACAGAACTTTTTGTACATGGTAcgcccattttaggggaccaaattATTGGAAAAAATgtacttatgtgtattaaagtagtctaAAGTTTAGTATTGGGTCCCGTATTCCCagcacacaatgattacatcaagcatGTGACTCTAAAAAGTTGTTGggtgcatttgctgtttgttttggttgtgtttctgaTTATTttatgcccaatagaaatgaatggtaaa

Function

NR:

description
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616005.2 False 4096 mRNA 0.51 11 48626319 48636018
XM_021616004.2 True 4100 mRNA 0.51 11 48626320 48636018

Neighbor

gene id symbol gene type direction distance location
LOC118966185 NA coding upstream 5983 48618983 ~ 48620336 (+)
LOC110531191 LOC106566483 coding upstream 8871 48616323 ~ 48617448 (+)
taf13 taf13 coding upstream 43810 48581243 ~ 48582509 (+)
LOC110532258 LOC106572114 coding upstream 222316 48400637 ~ 48404003 (+)
LOC110532257 LOC106572113 coding upstream 232220 48386767 ~ 48394099 (+)
lamb2l LOC106572102 coding downstream 1519 48637537 ~ 48698384 (+)
lamb2 LOC106572101 coding downstream 63194 48699212 ~ 48747524 (+)
usp19 NA coding downstream 111641 48747659 ~ 48782739 (+)
si:dkey-32e6.3 LOC106572098 coding downstream 146938 48782956 ~ 48789745 (+)
klhdc8b LOC106572099 coding downstream 195051 48831069 ~ 48935332 (+)
G812684 LOC106572106 non-coding upstream 84621 48538027 ~ 48541698 (+)
G812683 NA non-coding upstream 91448 48534571 ~ 48534871 (+)
G812613 NA non-coding upstream 190660 48426284 ~ 48435659 (+)
G812555 NA non-coding upstream 296492 48329596 ~ 48329827 (+)
G812951 NA non-coding downstream 105784 48741802 ~ 48742338 (+)
G812966 NA non-coding downstream 160285 48796303 ~ 48796775 (+)
G813047 NA non-coding downstream 274158 48910176 ~ 48910471 (+)
G813052 LOC106575331 non-coding downstream 279258 48915276 ~ 48915608 (+)
G813060 NA non-coding downstream 294198 48930216 ~ 48930427 (+)
G812688 LOC106572106 other upstream 55726 48545454 ~ 48570593 (+)
G812143 NA other upstream 644018 47982001 ~ 47982301 (+)
G809685 NA other upstream 2490587 46134731 ~ 46135732 (+)
G807841 NA other upstream 4173242 44442662 ~ 44453077 (+)
G807677 NA other upstream 4430278 44195715 ~ 44196041 (+)
G813071 NA other downstream 323731 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 367301 48962187 ~ 49006710 (+)
G813139 NA other downstream 479119 49115137 ~ 49115618 (+)
G815428 NA other downstream 2160196 50796214 ~ 50800381 (+)
G815610 NA other downstream 2442429 51078447 ~ 51078942 (+)

Expression


Co-expression Network