Gene
RNA
| Item | Value |
|---|---|
| gene id | usp19 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 48747659 ~ 48782739 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ubiquitin carboxyl-terminal hydrolase 19-like isoform X9 |
| id | description |
|---|---|
| K11847 | USP19; ubiquitin carboxyl-terminal hydrolase 19 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021616010.2 | False | 6662 | mRNA | 0.53 | 26 | 48747659 | 48782739 |
| XM_021616012.2 | False | 6659 | mRNA | 0.53 | 26 | 48747659 | 48782739 |
| XM_036988212.1 | False | 6665 | mRNA | 0.53 | 26 | 48747659 | 48782739 |
| XM_036988213.1 | False | 6613 | mRNA | 0.53 | 26 | 48747659 | 48782739 |
| XM_021616013.2 | False | 6649 | mRNA | 0.53 | 26 | 48747660 | 48782739 |
| XM_021616014.2 | False | 6643 | mRNA | 0.53 | 26 | 48747660 | 48782739 |
| XM_021616015.2 | False | 6636 | mRNA | 0.53 | 26 | 48747661 | 48782739 |
| XM_021616019.2 | False | 6620 | mRNA | 0.53 | 26 | 48747662 | 48782739 |
| XM_021616011.2 | False | 6655 | mRNA | 0.53 | 26 | 48747663 | 48782739 |
| XM_021616017.2 | False | 6532 | mRNA | 0.53 | 25 | 48747663 | 48782739 |
| XM_021616016.2 | False | 6626 | mRNA | 0.53 | 26 | 48747665 | 48782739 |
| XM_036988214.1 | False | 6472 | mRNA | 0.53 | 25 | 48747669 | 48782739 |
| XM_021616018.2 | True | 5889 | mRNA | 0.54 | 25 | 48762695 | 48782739 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lamb2 | LOC106572101 | coding | upstream | 135 | 48699212 ~ 48747524 (+) |
| lamb2l | LOC106572102 | coding | upstream | 49275 | 48637537 ~ 48698384 (+) |
| si:rp71-17i16.5 | LOC106572104 | coding | upstream | 111641 | 48626319 ~ 48636018 (+) |
| LOC118966185 | NA | coding | upstream | 127323 | 48618983 ~ 48620336 (+) |
| LOC110531191 | LOC106566483 | coding | upstream | 130211 | 48616323 ~ 48617448 (+) |
| si:dkey-32e6.3 | LOC106572098 | coding | downstream | 217 | 48782956 ~ 48789745 (+) |
| klhdc8b | LOC106572099 | coding | downstream | 48330 | 48831069 ~ 48935332 (+) |
| LOC110532277 | LOC106572094 | coding | downstream | 205703 | 48988442 ~ 48994535 (+) |
| LOC110532278 | LOC105027762 | coding | downstream | 211896 | 48994635 ~ 48998285 (+) |
| LOC110532282 | LOC106572092 | coding | downstream | 230424 | 49013163 ~ 49060073 (+) |
| G812951 | NA | non-coding | upstream | 5321 | 48741802 ~ 48742338 (+) |
| G812684 | LOC106572106 | non-coding | upstream | 205961 | 48538027 ~ 48541698 (+) |
| G812683 | NA | non-coding | upstream | 212788 | 48534571 ~ 48534871 (+) |
| G812613 | NA | non-coding | upstream | 312000 | 48426284 ~ 48435659 (+) |
| G812966 | NA | non-coding | downstream | 13564 | 48796303 ~ 48796775 (+) |
| G813047 | NA | non-coding | downstream | 127437 | 48910176 ~ 48910471 (+) |
| G813052 | LOC106575331 | non-coding | downstream | 132537 | 48915276 ~ 48915608 (+) |
| G813060 | NA | non-coding | downstream | 147477 | 48930216 ~ 48930427 (+) |
| G812968 | NA | non-coding | downstream | 156420 | 48939159 ~ 48939587 (+) |
| G812688 | LOC106572106 | other | upstream | 177066 | 48545454 ~ 48570593 (+) |
| G812143 | NA | other | upstream | 765358 | 47982001 ~ 47982301 (+) |
| G809685 | NA | other | upstream | 2611927 | 46134731 ~ 46135732 (+) |
| G807841 | NA | other | upstream | 4294582 | 44442662 ~ 44453077 (+) |
| G807677 | NA | other | upstream | 4551618 | 44195715 ~ 44196041 (+) |
| G813071 | NA | other | downstream | 177010 | 48959749 ~ 48959991 (+) |
| G813074 | etbr2 | other | downstream | 220580 | 48962187 ~ 49006710 (+) |
| G813139 | NA | other | downstream | 332398 | 49115137 ~ 49115618 (+) |
| G815428 | NA | other | downstream | 2013475 | 50796214 ~ 50800381 (+) |
| G815610 | NA | other | downstream | 2295708 | 51078447 ~ 51078942 (+) |
