XLOC_026722



Basic Information


Item Value
gene id XLOC_026722
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 46153127 ~ 46217473 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052488
ctgcgtaaaacatatgctggataagttggcggttcattccactgtggtgactcctgattaataaagagactaagccgaaaagaaaatgaatggatgttgACAGGTATAATAAAGAGATATATTGTTTACTCACTAAGACACACTAagtgctctattttgacggtccatgcgcaaagcgcaaaacacagggcgcaaacactttcagtgCGTGTCAGAATGCGTTTTTGCTAATAAAAGGACGGAAAAATTCGATTTGCGCCattgcgcatggtctaaaaggattGAGTCTATTTTCTTAATGTGAGTCTATTTTCTTAATGTAaagtaaagtaagtggaagtggaaaaactgagcatttcactagcaagaaaacagttaAAACATAACAATAACATCATACCCAATTAAAACTGGGTAAACAGATCACAAAAGTacaaaaggtaaataaataaaaataataaatgattacatTTCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052488 True 475 lncRNA 0.35 2 46153127 46217473

Neighbor


gene id symbol gene type direction distance location
XLOC_026721 shisa9b coding downstream 37895 46043406 ~ 46115232 (-)
XLOC_026720 igfals coding downstream 304870 45845007 ~ 45848257 (-)
XLOC_026719 NA coding downstream 309427 45832077 ~ 45843700 (-)
XLOC_026718 si:ch211-66h3.4 coding downstream 330213 45818626 ~ 45822914 (-)
XLOC_026717 h3f3b.1 coding downstream 375004 45776370 ~ 45778123 (-)
XLOC_026723 CR450782.1 coding upstream 7116 46224589 ~ 46227010 (-)
XLOC_026724 snrnp25 coding upstream 159832 46377305 ~ 46379900 (-)
XLOC_026725 cdip1 coding upstream 170387 46387860 ~ 46410387 (-)
XLOC_026726 NA coding upstream 245112 46462585 ~ 46463256 (-)
XLOC_026727 CR385086.1 coding upstream 540138 46757611 ~ 46762706 (-)
XLOC_026716 NA non-coding downstream 609676 45539786 ~ 45543451 (-)
XLOC_026709 NA non-coding downstream 1817274 44332747 ~ 44335853 (-)
XLOC_026708 NA non-coding downstream 2028757 44111545 ~ 44124370 (-)
XLOC_026703 BX682557.1 non-coding downstream 2263684 43878456 ~ 43889443 (-)
XLOC_026731 NA non-coding upstream 912559 47130032 ~ 47131111 (-)
XLOC_026732 NA non-coding upstream 977265 47194738 ~ 47196960 (-)

Expression



Co-expression Network