LOC110532280 (etbr2)


Basic Information

Item Value
gene id LOC110532280
gene name etbr2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49003288 ~ 49006767 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616026.2
AGCTACCCATGTCTGGGCAGGCAGTGTACTTGTTAACAGACTCACAGATGCTCCTATAGGACTGCAGCCACAGGACGCAGAGAGAGAGTTCCCCAAGCTTCAGCATCTCACCACGGATTGGcacattcttctcttctcctaAATTAACTTCTGCTGAGGGGCCTCATTTTTACCACGTCTCCTGCAGTGATCAAAGCTGTCAAGTTTTGGAATTTAAAGAAAATCTACTTTTCAGGCTACTCATCTCACGATGATTCCCTTTATTTCATTGGTGATACTATTGACAGTGTGGGCTTCCGATGCAAAAAATGTTCCACAGACAAACAGTGCATCTGTTGAAAAGGATATGTCAAATCTCGACATTCAAGTCATTCAAAGCCATGGTTATGGTGATGAGGATGTAAAACAACTGCAATTTGACAAACAGCACAAGAGAGCGCCGCGGGGCGCAGAGACCATGGACACAGACGCAGGTGAACCTCAGTCTACCTTCTCACAGTCTTATGAGAATGAATTCTTCACCACACCCAGAGCCACCCAGTTCTCTAACTCAACCCTAGACACTGGAGCCAACACAGATGGGGACCAGGACAATACCAGCACCACAGAGCGGGGCATCACCCACATCCACAACCCTCTGTACCCAGTGACTGACAGCTCCTACACTGCCTACGCTGTCATGTTCCTGTCCCTGGTGGTGTTCGCTGTGGGGATTATAGGGAACCTGGCTGTGATGTGCATCGTCTGGCACAACTACTACATGAGGAGTGCCTGGAACTACATCCTGGCCAGCTTGGCTTTCTGGGATTTCCTGGTGCTCTGCTTCTGTTTACCTGTGGTGGTCTTCAATGAGCTCACCAATAAGAGGCTGCTGGGGGACATCTCATGCAGAGTGGTACCATATATGGAGGTGACTTCCCTAGGGGTGACTTCCTTCAGCCTGTGTGCCCTGGGTATCGACCGCTTTAATGCTACCACTAGCTCCCAGCCCAAGACCCGTCGGGTGGAGCGCTGTCAGTCCGTCCTGGCCAAGCTGCTGGTCATCTGGGTTGGTTCCATGGTGCTGGCGGCCCCAGAGCTGCTCCTATGGCAGCTCAGCCAGGCCGTGTCTCCAGCCACAGGGGCCTTGATGGACTCCTGCACCATGAACCCTACCTCCAACCTTCCCGAGTCCATCTACGCCCTGGTCATCAACTACCACGAGTGCCGCATGTGGTGGTACTTTGGCTGCTACTTCTGCCTGCCTGTAGTCTTCACCCTGCTGTGCCAGCTGGCCACCTGCCACGTGTCCAATGACGGTATCCCTGAGCGTCTGGAGGAGCGCTCCCCCTCCAAGAAGCAGAagatacaacacagtcaacaggTGGAGCGCCAGCTCAACTGCACCGTGATGGCCCTGGCCGTGGTCTATGGCATCTGCGCCCTGCCGGAGAACGTGTGCAACATCGTTCTGGCCTACACCGCCATGCCCATCTCTGATGACACCGCCACCCTACTGGCCCTCATCAACCAGTTTTTCTTGTTCTTCAAGTCGTCGGTGACGCCGGTGCTGCTGTTGTGCCTCTGTAAGTCCCTGGGCCAGGCCTTCatggactgctgctgctgctgctgtgagGAGTGCCAACCCGGCAGTTCCTCTTCCCCTGGCACTGAGGCCAAACTCAAGAGCACATCCTCCATCTTCTTTGACAAAGCCAAGGACAGCTCCACCATCCTGTCAATCAGCGGGTCCAGCTGAATTGGCTTCTCCTGCCTGCCTTTTCTTTCCATCCTATCACCTAACCTGATTAGATGTGGTAACAAAACAACTCACTTTTCAGCAGTGGACATTCCAACCTCAACctcaccccctttcctccccaGTCCCACCACACAGGGATCAGATGCTGGATCTCTCCATGGACACGCCTTTTGTTTTCAGTGTTATTAGTCAGAGGACTGGGACCATTGTCAGTGTCACCTTCTCTGTACCTTTAAAGTCTGTAATGTCTCTCCTTTTGATGTTCTCTCCAAATAGAGACCACACCCCATCCAGTTTTAAGGTGGTTCATTTTACAGGAAGTTAAGACTGACTAAGTGCAGATTAGGAGAAGAGCTCCATTTAATATCTTTGTAGAAGTGTCACCCCAATGTTTTCATCCTACGGATTATTAGATCAAGATAAACTGAGTATTATGTTAGATTATTATGATAGGTTTGACTAACTAACATTCCCTTGGAGCCTCAGAGTGTGGGGCACTGAGATAATTATTTTTGATGTCACAGCCTATTTACATATCTGTTAAACAATGTGTGTTCTCTCACTAGCCAACACAGACAAGTGTGCCATAGAATTTTcttcatgcccccccccccccccccccccaactccagATGGAGCTAATTCATCTTTAGCCATCCCGTATCACTGTATACATTATTACTTTGAGTTTTATTAATAATCAAGAGGGATGGTTAAGACGTAGTAATTTCCATCAAAGTGCTGTGAATAATAAATATTTGACGAGATCATCATGAAAAGTCACTGTACAGAGGTCAAGGTTATCAACCGGTTATAAGAAGGTCAAGAGAGAAGTCACCTCATTTTGTGAATAAGAGAAAAAATGGTTCTGAGATGTAAATCCGGCTGTAGTGTTGTTAATTTATCCAATAAAGGTTTATAATTTA

Function

NR:

description
prosaposin receptor GPR37L1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04244 GPR37L1, ETBRLP2; prosaposin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616026.2 True 2667 mRNA 0.49 2 49003288 49006767
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110532275 LOC106572096 coding downstream 24154 48962163 ~ 48979134 (-)
LOC110532274 LOC106572097 coding downstream 44176 48948869 ~ 48959112 (-)
LOC110532266 LOC106572105 coding downstream 414727 48585633 ~ 48588561 (-)
slc35c2 slc35c2 coding downstream 422124 48571666 ~ 48581164 (-)
LOC110532264 LOC106572106 coding downstream 432671 48534552 ~ 48570617 (-)
LOC110532281 LOC106572093 coding upstream 53304 49060071 ~ 49063505 (-)
LOC110532296 myh7b coding upstream 748253 49755020 ~ 49771887 (-)
LOC110531196 NA coding upstream 799365 49806132 ~ 49818757 (-)
LOC110532299 LOC106572073 coding upstream 814207 49820974 ~ 49824793 (-)
LOC110532301 NA coding upstream 975630 49982397 ~ 49985562 (-)
G813386 NA non-coding downstream 27996 48967335 ~ 48975292 (-)
G813383 NA non-coding downstream 43556 48959507 ~ 48959732 (-)
G813373 NA non-coding downstream 58035 48944973 ~ 48945253 (-)
G813372 NA non-coding downstream 59855 48941755 ~ 48943433 (-)
G813450 NA non-coding upstream 88387 49095154 ~ 49096557 (-)
G813466 NA non-coding upstream 123559 49130326 ~ 49130558 (-)
G813472 NA non-coding upstream 131365 49138132 ~ 49138338 (-)
G813492 NA non-coding upstream 154357 49161124 ~ 49161688 (-)
G813506 NA non-coding upstream 165734 49172501 ~ 49172718 (-)
G813357 LOC106578276 other downstream 87584 48915435 ~ 48915704 (-)
G812840 NA other downstream 494194 48508645 ~ 48509094 (-)
LOC110532252 fkb1a other downstream 716858 48278174 ~ 48286453 (-)
LOC110531190 clcn6 other downstream 1326639 47642136 ~ 47676649 (-)
G811300 NA other downstream 1821491 47178804 ~ 47181797 (-)
G814020 NA other upstream 457190 49463957 ~ 49466762 (-)
G814157 edem2 other upstream 728378 49735145 ~ 49736111 (-)
G815044 NA other upstream 1211589 50218356 ~ 50218697 (-)
G815045 NA other upstream 1212100 50218867 ~ 50219848 (-)
G817848 NA other upstream 3146515 52153282 ~ 52153642 (-)

Expression

LOC110532280(etbr2) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 150.
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LOC110532280(etbr2) Expression in each Bioproject

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LOC110532280(etbr2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4000.
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Co-expression Network