LOC110532282 (LOC106572092)


Basic Information

Item Value
gene id LOC110532282
gene name LOC106572092
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49013163 ~ 49060073 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988217.1
TCTAATCTACATTGTTAGAACAGGCTACTGCTGCTCACTAGAGGATTTATCATCATCACACACTTCCTGGTTTTAAAGCTTTCTGTCTTCAGGTGCAGTGACAACATGAGGACTTCGCTGACACATTTGGACTTTCTCTGCTTTCATTTATATTGGGCTATCATTGCTCTTTTTCGGGTTTAAACTTTATTTCATAGAACATAGAAAACTATTATTTGAATGAACTACATTGTCCTCCTCGATGCAGTACAACAAAGTCTAAAGTCGTTCGAATGTGGGTTCTTAGCCCTCGGGGGGAAGAGCGACATTAGATAACGCGTAGCACTCCAAGAAGTTGTTGCAGTCAAGTAGAGAAGACAGAAGGGGACAAAGTTTGTATTTCAGTTGATCATTTTCAAGAAGAAAGACACCGAAGATGTCGGATTCAATGTCCAGCTTTTTGCACATTGGGGACATCGTTTCCCTTTACGCAGAGGGCTCTGTCAATGGTTTTATAAGTACACTTGGGTTGGTGGATGACCGATGTGTGGTAGAGCCAGCTGCAGGGGACCTGGACTATCCTCCCAAGAAGTTCAGAGACTGCCTCTTCAAAGTGTGCCCCATGAACCGTTACTCTGCACAGAAACAGTTCTGGAAAGCCAAGCAGGCCAAGCACGAGAAGGACAAGATCGCTGATGTTGTGCTACTTCAGAAACTACAGCATGCCTCTAACCTGGAGCAGAAACAGAATGAGACCGAAAACAAGAAAGTCCACGGAGATGTAGTAAAATATGGCACTGTCATTCAGCTGCTGCATATGAAGAGTAATAAATACCTGACTGTGAATAAGCGTCTGCCTGCCCTGCTGGAGAAAAACGCCATGCGGGTCACCCTGGACGGGACGGGGAATGAGGGCTCCTGGATGTTCATCCAACCCTTCTGGAAGCTAAGGGCCAACGGAGACAATGTAGTGGTAGGAGATAAGGTGATCCTGAACCCAGTGAATGCAGGCCAGCCCCTACATGCCAGTAACTATGAGCTCTCTGACCACGCTGGATGCAAAGAGGTTAACTCTGTGAACTGCAATACTAGCTGGAAAATCAACCTGTTCATGATGTTCAGTGACCACAAGGATGAAGTCTTGAAAGGAGGGGATGTGGTGCGGTTGTTCCATGCGGAGCAGGAGAAGTTCCTGACCTGTGACGAGTACAAGGTCAAGCTGCATGTGTTCCTCCGTACCACCCTGCGCCAGTCTGCTACCTCTGCCACCAGCTCCAATGCCCTGTGGGAAGTGGAGGTGGTGCACCATGACCCATGTCGAGGAGGGGCCGGACACTGGAACAGTCTGTACCGCTTTAAACACCTTGCCACAGGGAACTATCTTGCAGCTGAGGAAAATCCGGGTTATAAAGGTGACAGCGTTGAAATCCAGCCTTCGGCGAGTGAAGATACGCTGGACAGTAGAGGAAAACTAAAGATGTTGGGTGAGAGGATAAAGTACAAGCTGGTGGCTGTGCCTCATGGGAATGACATTGCTTCCTTGTTTGAGCTAGACCCCACCACTCTGCAGAAAACAGACTCCTTTGTGCCAAGGAATTCATATGTGCGTCTCAGACACCTATGCACCAACACATGGATCCAGAGTACCAACGTGCCCATAGATATCGATGAGGAGAGACCCATCCGGCTCATGCTGGGCACCTGCCCTACCAAGGAGGATAAGGAGGCATTTGCCATAGTGTCAGTGCCAGTGATGGAGATCCGGGATCTGGACTTTGCCAATGATGCCAGTTTCATGTTGAGCACCATAGTGGACAGGTTCAATGAGGGCTTTATCAGTCCCAATGACAGAAGATTTGCCATTAAGCTGTTGGAGGATCTGGTGTTCTTTGTGGTGGACACGCCCAACAGCGGCCAGGTCGTCCTGGATGTGGCGATGACCAAGGCCAACCGCGAGAGACAGAAACTCATGAGGGAACAAAACATCCTCAAACAGATCTTTGGGATCTTGAAGGCCCCTTTCAAAGATAAGGGGACAGAGGGCCCGTTGCTGCGATTGGAGGAGCTGTCAGACCAGAAGAATTCCCCCTACCAGTACATGTTCCGTCTCTGTTACCGGGTACTGCGACACTCACAGGAAGACTACCGCAAGAACCAGGAGCACATAGCCAAGCAGTTTGGGGTGATGCAGTCTCAGATTGGCTATGACATCCTGGCTGAGGACACCATCACTGCTCTGCTGCACAACAACCGCAAGCTGCTGGAGAAACACATCACCAAGACGGAGGTGGAGACCTTTGTTAGCCTGGTCCGCAAGAACAGGGAACCCAGGTTTCTGGACTACCTGTCAGATCTGTGTGTGTCCAACAACGTGGCTATTCCTGTCACTCAGGAGCTGATCTGTAAGTGTGTGCTGGATCCCAAGAACCAAGACATCCTCATAAAGACTGAACGGCGTGTGCCCAAAGAGATTCCCAATGCCACTGAATACATGGGCATGGAGGAGTATGCTGACGATGATGAGGTGTGGCTGGTCTGGACTGACAAGACCAATGAGAAGCAAGAGAAGGGCATCAGACAACTAGCCCAGGAGGCCAGACAGGGGAACGCTCATGACGAGAACGTGCTCACGTACTACAGGTACCAGCTGAAGCTGTATGCACGAATGTGTCTGGACCGCCAGTACCTGGCCATAGATGAGATCTCCAAGCAGCTGGATGTGGAGCTCATCTTCCTGTGCATGATGGATGAGACACTGCCCTTTGACCTGCGCGCCTCTTTCTGCAGACTGATGCTGCATGCGCACGTCGACCGAGACCCCCAGGAGCTGGTCACGCCCGTCAAGTTCGCCCGTCTCTGGACAGAGATCCCCACCTCCATCACAATTAAAGATTATGACTCCAACATGGATGACTCGCGAGACAATAAGAAGAACAAGTTTGCCAACACCATGGTGTTCATGGAGGAGTACCTCAACAACGTCCTCAATGATGACTTGCCTTTCGCTGACGAGGAAAAGAACAAACTGACCTATGAGGTGGTGAGCCTGGCCAGACACCTCATCTACTTTGGCTTCTACAGTTTCTTTGAGCTGCTGAGGTTGACACGGACCCTTCTGGGAATCATCGACTGCATCCCCAACCCTTCCCTCATCAACCCCATGTTCCAGGACGATGGCAGTGGGAAGAACATGAAGCGCTCCATCCATGGTGTTGGCCAGATGATGTCCACCATGGTACTGAGCAGGAAACAGTCCATTTTTGGAGGTCCAGGCCGGAGTGCTTCCAACATAGAGGGCCAGAACCGCAGTAAGGACAGCATCGACAAACAGGACATCACTGTCATGGACACCAAGCTGAAAATACTAGAAATCCTGCAGTTTATCCTGAATGTCCGTCTGGACTATCGTCTCTCCTTCCTGCTTTCTGTCTTCAAGAAAGAGTTTGTTGATGTTTATCCCATGGCAGATGCCGATGCTACAACATCAATGGAGCAAGCAGCCACCATCAACCTGCAGCACATAGGAGAGCAGGCAGAGGCCATGTTTGGTGTGGGGAAGGGGAACAGTATTCTGGAGGTGGATGATGAGGGAGGTCGTATGTTCCTGAGGGTGCTGATCCATCTCACCATGCATGACTACCCTCCTCTGGTCTCTGGGGCTCTACAGCTGCTTTTCAAACACTTCAGCCAGAGACAGGAGGTGCTGCACACATTCAAACAGGTCCAGTTGCTGATCTCGGGCCAGGATGTTGATAACTACAAGCTGATAAAGAGCGACCTTGACCGTCTCCGCACCATGGTGGAGAAGTCTGAGCTCTGGGTGGACAAGAAGAGCAGttctggaggaggggaggggaagaaagacaagAAGGACAAAAAAGAGAATGTAGAGATGGCCTCAGAGGTTGCGACCCCCAAAAAAGAGAAGTCGGATAAGAGCAATGAGAACTACCAGAAAGTTAaagatATCTTGGAGCGTCTGAATAAGATGTGCAGCTCGGGTGTGTGGAAGAAACAGCAGAGACTTCTGAAGAACATGGGAGCCCACAAAGTGATGCTGGACCTGCTGCAAGTGTCATACGATCAGCATGACACCAAGATGCAGGGGATCATCAAGTGCACTCACCTGTTCCTGCAGAAGTTCTGCATGGGGAACCTGGAGAACCAGATGCTCCTCCATAAGAACCTCAGTCTCTTTCTCAACCCAGGActcatGGAGGCAGAGACGGTGCAGCACATCTTCAGCAATAACTACCAGCTGTGTACAGAGATCAGTGAGAACGTGCTGCAGCACTTCATCCACTGCCTGGCCACTCACGGACGCCACGTCCAGTACCTCAACTTCCTGCACACTATCATCAAGGCCGAGGGCAAGTACGTGAAGAAGTGCCAGGACATGATCATGACTGAGTTAACCAACGCTGGTGAGGATGTAGTGGTGTTTTATAATGACAAGGCATCATTTGCCACCATGCTGGAGCTGATGGCAGAGTCCAGGGAGGGGGTTCAGGAGCACAGCCCCCTGCGCTACCACATCTCTCTGGTAGAGCTGCTATCTGCCTGCGCTGAGGGAAAGAATGTTTACACAGAGATCAAATGTACCTCGCTGCTGCCCCTAGAGGACGTGGTGAGAGTGGTCACACACGAGGACTGCATCACAGAGGTGAAGGTTGCCTACGTGAACTTTGTGAACCACTGCTACGTAGATACCGAGGTAGAGATGAAGGAGATTTACACCAGCAACCACATCTGGAAACTGTTTGAGGACTTCACTGTGGACATGGCCAGGGTGTGTAACAAGAGAGAGAAGCGTCTGACTGACCCCATCCTGGAGAAGTACATCATCAATGTGGTGTTTGATACCATCAATGCCTTCTTCAGCTCCCCCTTCTCTGAAAACAGCACCTCTCTACAGACCCACCACACCATAGTAACACAGCTGCTCCAGTCTAGCATGCGTCTGCTGGAATGTCCCTGGCTGCAACAGCAACACAGAGGCCTGGTGGAGACTTGCATCCGCACCCTGGCTATGACAGCAAAGAACCGCTCCATTTCCCTGCCTCTGGACCTGGAGTCTCAGATCACCACCATGCTGAGCAGCAGTGCTCCCAATTCTCTGTCCCGCTCCAACCCCAACTACAAGAGCTCCACCCGCTCCAGCCGCCCCTCCGCCCCCAACAACCCCTGGGACTACAAGAACATCATCGAGAAGCTGCAGGACATCATCAACACCCTGGAGGAGCGTCTGAAGCCGCTGGTGAACGCAGAGCTGTCTGTTCTGGTGGACGTCCTGCATCAGCCTGAACTCCTCTTCCTGGAGGGGACGGACGCACGGCAACGCTGCGAATCAGGAGGCTTCATCTCCAAACTGATTCAGCACACTAAAGCCCTGATGAGCTCAGAGGAGAAGCTCTGTATCAAGGTTCTGAGGACCCTGCAGGAGATGCTCATACGCACACTGGACTTTGACGAGAAGGGCATTGCACTGAGGAAGGTGCTGCTACAGAACTACCTCTTCACCAACAAGAAGAACAGCAAGGGAGATCTGGTTGACCTTGGAGCAACAGGTGCTGAGCAGGAGAGAGACTGGACGGCTGTAGCTGCAGTCCAGTGTCGCCTGGACAGGGAGGGTGGCACAAAGCTCTTTACTGACCTCGTCATGAGCACCAAGAACGACAAGATCTTCCAGGAGAGCATCCAACTGGCCATATGTCTGCTGGAGGGGGGCAACACAGAGATCCAGAACTCCTTCTACAAGCTGATGATGGGGGACAACAAGTCTGAGAAGTTCTTTAAGGTCCTCCACGACCGGATGAAAAACGCCCAGATGGATATCAAGGCCAACGTATCAGTCAGCGTGGGGGAGATGAGTAACAAAGCCAATGACAACAAAGACCTGGAAACCAGCTCTGGTGGGTTGGTTCTACCTGCGACTACTCTGCCTCTCTTGGCCCCCTCCATCGCCCAGGTCACTGCCCTGGCTTCGGAGCCTGAGCAGAAGGAAGTGGAGACCGAGATGGGCCCTGCAATCATCATTATGAAACCCATCCTGCGCTTCCTCCAGCTGCTCTGTGAGAACCACAACCAGGATCTGCAGAACTTCCTTCGCTGCCAGAACAACaagaccaactacaacctggtATGTGAGACATTGCAGTTCCTGGACATCATGTGTGGCAGCACCACAGGAGGCCTGGGTCTGCTGGGCCTCTACATCAATGAGAGCAACGTGGGCCTCATCACCCAGACCCTGGAGACGCTCACAGAGTACTGCCAGGGCCCCTGCCAGGAGAACCAGACTTGTATAGTGACCCATGAGTCGAATGGCATCGACATCATCACAGCCCTCATACTGAATGACATCAGTCCTCTGTGTCGTTACCGCATGGAGATGGTTCTGCAGCTCAAGGACAACGCCTCCAAGCTGCTACTGGCTCTGATGGAAAGTCGCCATGACAACGAGAATGCAGAGAGGATACTGTTCAACCTCCGACCTCGGGAACTGGTGAAGGTGATAAAGAAAGCCTACCAGCAGGAGAGTGAATGTGAAGGTGGAGAGGTGTCACCTCAAGAGGTCGGCCACAACATCTACATCCTGGCACTCCAGCTGGCGAGGCACAATAAGATCCTGCTCAATCTGCTGAAACCTGCAAAGAGGAccaaagagggagaggagggcataTCCTCTATGTTGAACCTGAACAATCGGCCGCTCTCTCAAATGTTGAAATCTACCGTGCCGGTAGAGAGCGAGGAGCAGGACCCACTGGAATTCTATGAGCAGCACACTTCACAGATAGAGATTGTGCGTGAGGACCGCAGCATGGAGCAGATCGTGTTTCCCATTCATCCCATCTGTGAGTTCCTGACGGAGGAGTCCAAGTTCCGTGTGTTCAACACCACCGAGCAGGACGAGCAGGGCAGCAAGGTCACACACTTCTTCCAGCAGGCCTCCTTCCTCCACAACGAGATGGAGTGGCAGAAGAAGCTGCGCAGTATGCCAGTGCTGTTTTGGTTCTCTCGCAGGATGAGCACCTGGGGCAGCATCTCCTTTAACCtggccgtcttcatcaacctcaTCATCGCATTCTTCTACCCTTACGACTCaggccaagGTGCAATAGATGACTCGATGCTGTCCATGCTGTTCTGGGGTTTCCTGGGTCTGTCTGTCATGGGCATGTTTTCCAAACGCTACGGCCTCAGGCCCTTCACTGTGGCCCTCATACTGCGCTCCATATACTGCTTCGGCATCGGCCCCACTCTCATCCTACTGGGCACCCTCAATCTGATAAATAAGATAGTGTTTGTGGTGAGCTTTGTGGGCAACAACGGGACATTTATCATGGGCTACCGTGCGATGGTGATGGACGTGGAGTTCCTATACCACCTAGCCTATGTTCTGACCAGCACCCTGGGGCTCTGTGTCCATGAGCTCTTCTACAGCTTCCTGCTGTTTGATCTGATCTACCGGGAGGAGACCCTGTTCAACGTGATAAAGAGTGTGACCCGGAATGGGCGCTCCATCCTGCTCACTGCCCTGCTAGCCCTTATCCTGGTCTACCTGTTCTCCATTGTGGGCTTCCTCTGCCTCAAGAACGACTTCATCATGGAGGTGGACCCTCTGCCTCAGATCGACTCAGGAGGACATGGCAATGAGGAGGCATCACAGGACTTCCTGAACTCCTGCAGTGGAGATGGAGTCAGCTGCACTGCCGAGGCAGGACTCCCTGCTGAACCTGATGAGGAGAACAATTCGGAGCGGGCCTGTGACACTCTGCTCATGTGCATTGTCACCGTGCTGAACCACGGGCTGAGGAACGGTGGAGGGGTGGGAGACGTGCTACGCAAGCCCTCTAAAAACGAGCCACTGTTCCCAGCCCGCGTCATCTACGATCTCCTCTTCTACTTCATTGTCATCATCATCGTACTCAACTTGATCTTTGGTGTCATCATCGACACCTTCGCTGACTTGCGTAGTGAGAAACAGAAGAAAGAGGAGGTCCTCAAGACCACCTGCTTCATCTGTGGTCTGGAGAGGGACAAGTTTGATAATAAAACTGTGTCTTTTGAGGAACACATAAAGTTGGAGCACAACATCTGGAACTACCTGTATTTCATCGTGCTTGTTCGCGAGAAGAACAAGACTGACTACACAGGTCCAGAGAGTTATGTGGCCCTCATGATAAAGAGTAAGAACCTGGACTGGTTCCCCCGCATGCAGGCCATGTCCCTGGTGGTGACGGATGGAGACGGGGAGCAGAATGAAATGAGGAACCTGCAGGACAGACTGACGTCCACTATGAACGTGGTCAGCCAACTCACAGGACAGTTAACAGAGCTCAAAGAACAGATGACggagcagaggaagaggaggcagaggatgGGCTTCGTGGATGTCCAGTCAGGAGGAGCTGGTGCAGCTAGTGTAACCCCCAGTGCTGCTGGAGGAAACCACCAAATGTTCAACAAACCCTGATGTCCCGTCTTACCGCCATAGACTGGAAGAGTCCGCCGGGCCTATACATCCATCATGTGTTAAACATAGTGGTGATGTTCTTAGTTGTGACTGAGTTACTGCTGTTGGGTTCTTTGTAAATCAATGTTTTTCTTCAAGGGCCCCTTCAGTACTTCCAGTAGTCTGAAGCAATAgaggaatatctcaattgcataccTCGCgtcatctccttctcaaaaccctttggatgagaaagccagaggtccctcccctctgacaaTGGGTTTTGAGGAGGAGACGAGGTATGGAATTGAGATCCTCCCCATGTTTTTGGTCGTTTGTCCTCACAGCTATCTATTAATGGCATTTGCACTGTTGACAGACGTACCTCAGATGAGGAAATTATGGGAAATTGATTCCTGCAAAGCAGGAAGCAACATGTCCATCCTTTATATGAATGTATTTATATACACTGATTAATACAGTAGGCACATGAGTACCACAATGTTTGAGTGTCTGAAGCATGCATGTGATTTGGTTTGGAACACTTGTCACAGGGCCATTGGACTGGTTAGAGAAGTGTCTCCATTGCACTGAGAAATTGTTCTCGGACAGGCCTCAGTAAAAATATTTGATTTTAACTGTTTGTGTTTTAACTTCTTTATAACATGTCAAATCTTCCAAATAAAAAATTAAGAACTTTT

Function

NR:

description
inositol 1,4,5-trisphosphate receptor type 3 isoform X1

GO: NA

KEGG:

id description
K04960 ITPR3; inositol 1,4,5-triphosphate receptor type 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988217.1 True 9141 mRNA 0.51 58 49013163 49060073

Neighbor

gene id symbol gene type direction distance location
LOC110532278 LOC105027762 coding upstream 14878 48994635 ~ 48998285 (+)
LOC110532277 LOC106572094 coding upstream 18628 48988442 ~ 48994535 (+)
klhdc8b LOC106572099 coding upstream 77831 48831069 ~ 48935332 (+)
si:dkey-32e6.3 LOC106572098 coding upstream 223418 48782956 ~ 48789745 (+)
usp19 NA coding upstream 230424 48747659 ~ 48782739 (+)
LOC110532283 LOC106572090 coding downstream 3615 49063688 ~ 49081175 (+)
LOC110532284 LOC106572089 coding downstream 25751 49085824 ~ 49097702 (+)
LOC110532286 LOC106572086 coding downstream 100374 49160447 ~ 49161689 (+)
mrgbp mrgbp coding downstream 103476 49163549 ~ 49167417 (+)
LOC118966186 NA coding downstream 124308 49184381 ~ 49186162 (+)
G813100 NA non-coding upstream 1215 49011646 ~ 49011948 (+)
G813099 NA non-coding upstream 1551 49011334 ~ 49011612 (+)
G813074 etbr2 non-coding upstream 6453 48962187 ~ 49006710 (+)
G813076 NA non-coding upstream 37778 48967764 ~ 48975385 (+)
G812969 NA non-coding upstream 69734 48942199 ~ 48943429 (+)
G813125 NA non-coding downstream 22251 49082324 ~ 49082584 (+)
G813128 NA non-coding downstream 24844 49084917 ~ 49085116 (+)
G813135 NA non-coding downstream 43510 49103583 ~ 49103820 (+)
G813137 NA non-coding downstream 45905 49105978 ~ 49106213 (+)
G813140 NA non-coding downstream 55610 49115683 ~ 49116087 (+)
G813071 NA other upstream 53172 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 442570 48545454 ~ 48570593 (+)
G812143 NA other upstream 1030862 47982001 ~ 47982301 (+)
G809685 NA other upstream 2877431 46134731 ~ 46135732 (+)
G813139 NA other downstream 55064 49115137 ~ 49115618 (+)
G815428 NA other downstream 1736141 50796214 ~ 50800381 (+)
G815610 NA other downstream 2018374 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 2285299 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 3263198 52323001 ~ 52325924 (+)

Expression


Co-expression Network