Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110532283 |
| gene name | LOC106572090 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 49063688 ~ 49081175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| deoxyribonuclease gamma-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036988220.1 | False | 1866 | mRNA | 0.43 | 9 | 49063688 | 49081175 |
| XM_036988219.1 | False | 1404 | mRNA | 0.44 | 10 | 49063960 | 49081175 |
| XM_036988218.1 | False | 1875 | mRNA | 0.43 | 9 | 49063961 | 49081175 |
| XM_036988222.1 | False | 1852 | mRNA | 0.44 | 9 | 49064045 | 49081175 |
| XM_036988221.1 | False | 1859 | mRNA | 0.44 | 9 | 49064106 | 49081175 |
| XM_036988223.1 | True | 1855 | mRNA | 0.44 | 9 | 49065242 | 49081175 |
49,052,000
49,054,000
49,056,000
49,058,000
49,060,000
49,062,000
49,064,000
49,066,000
49,068,000
49,070,000
49,072,000
49,074,000
49,076,000
49,078,000
49,080,000
49,082,000
49,084,000
49,086,000
49,088,000
49,090,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532282 | LOC106572092 | coding | upstream | 3615 | 49013163 ~ 49060073 (+) |
| LOC110532278 | LOC105027762 | coding | upstream | 65403 | 48994635 ~ 48998285 (+) |
| LOC110532277 | LOC106572094 | coding | upstream | 69153 | 48988442 ~ 48994535 (+) |
| klhdc8b | LOC106572099 | coding | upstream | 128356 | 48831069 ~ 48935332 (+) |
| si:dkey-32e6.3 | LOC106572098 | coding | upstream | 273943 | 48782956 ~ 48789745 (+) |
| LOC110532284 | LOC106572089 | coding | downstream | 4649 | 49085824 ~ 49097702 (+) |
| LOC110532286 | LOC106572086 | coding | downstream | 79272 | 49160447 ~ 49161689 (+) |
| mrgbp | mrgbp | coding | downstream | 82374 | 49163549 ~ 49167417 (+) |
| LOC118966186 | NA | coding | downstream | 103206 | 49184381 ~ 49186162 (+) |
| sulf2b | LOC106572085 | coding | downstream | 232011 | 49313186 ~ 49493787 (+) |
| G813100 | NA | non-coding | upstream | 51740 | 49011646 ~ 49011948 (+) |
| G813099 | NA | non-coding | upstream | 52076 | 49011334 ~ 49011612 (+) |
| G813074 | etbr2 | non-coding | upstream | 56978 | 48962187 ~ 49006710 (+) |
| G813076 | NA | non-coding | upstream | 88303 | 48967764 ~ 48975385 (+) |
| G812969 | NA | non-coding | upstream | 120259 | 48942199 ~ 48943429 (+) |
| G813125 | NA | non-coding | downstream | 1149 | 49082324 ~ 49082584 (+) |
| G813128 | NA | non-coding | downstream | 3742 | 49084917 ~ 49085116 (+) |
| G813135 | NA | non-coding | downstream | 22408 | 49103583 ~ 49103820 (+) |
| G813137 | NA | non-coding | downstream | 24803 | 49105978 ~ 49106213 (+) |
| G813140 | NA | non-coding | downstream | 34508 | 49115683 ~ 49116087 (+) |
| G813071 | NA | other | upstream | 103697 | 48959749 ~ 48959991 (+) |
| G812688 | LOC106572106 | other | upstream | 493095 | 48545454 ~ 48570593 (+) |
| G812143 | NA | other | upstream | 1081387 | 47982001 ~ 47982301 (+) |
| G809685 | NA | other | upstream | 2927956 | 46134731 ~ 46135732 (+) |
| G813139 | NA | other | downstream | 33962 | 49115137 ~ 49115618 (+) |
| G815428 | NA | other | downstream | 1715039 | 50796214 ~ 50800381 (+) |
| G815610 | NA | other | downstream | 1997272 | 51078447 ~ 51078942 (+) |
| G815767 | casz1 | other | downstream | 2264197 | 51345372 ~ 51346494 (+) |
| LOC110532349 | LOC106591969 | other | downstream | 3242096 | 52323001 ~ 52325924 (+) |
