mrgbp (mrgbp)


Basic Information

Item Value
gene id mrgbp
gene name mrgbp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49163549 ~ 49167417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616036.2
CAAATATGGAATGCCCTGTCTAAATGTAGCCTGGTCACATATACACATTGTAGGCCTACTTTACCGAGGTTTGTGCACATGCAAAATAATACATTTCAAAAATGATATTATTATAGCAAGCCTATCAAAGTATTGTATGTATTGTATCAAACATCTCTGGGTGAAAGCGCATCCCAGTTGGATAACCGTTTTACCAGTGATAGGGGCGCTGTTCTCTGTCCTGCTGGCAGTTTTATGTTATTGAAAGAGAACAACAGCATGGGGGAAGCCGAGGTTGTTCCAGCCGACGAAAAACAGGCAGACTCGGGGATCAGTCACATCGAAGACTCGGTGGTATGGAGTCAAGAAGTCGAGGTGTGCCTGTTCCATGCAATGCTAGGTCACAAACCCGTAGGGGTAAATCGTCACTTTCACATGATCTGCATCCGGGATAAATTCAGCCAGAATATTGGGAGGCAAGTGTCATCAAAGGTGATCTGGGACCACCTGGGAACTATGTATGACATGTCAGCCTTGCATGAGTCTGAAATATTGCCGTTTCCCAACTCAGAGAAGAGCTTCAATCTTCCAGACGAGATTATTCAACAAGTAAAAGAAGGTAAACTGGTATCCGAGGACGACGTGAAAGACGATTTCAAAGAAGAACGAGACCCCCCAGCCATGCATGAAGAAGGTCTGAGTCCCAGTATGGCTGCTGGCCAGGATTTTGAGAGGTATGGACAGAAGGACTCTTTCGATCTGTTCCAAAACTCCAGCTTGACCCCAGTACAGACCAGCTCATAACCAGAGGCTTCTTTACAGTGACCACCCCGCCTAGTGCACAAAAAAATGCAGCAACTCCTCAGTGAAGATGACAGAGAGGGTAGGCAGCAAAgacaaggacagagaaagagaccgagagaagGGTTCCGCTGAGGGCGGCCCGGGGAAGGAGGCAGCagacaagaggaagaggaacCGTGCCACTGAGAAGGTGCTCAACTCCAGCAGCAACCCCTCCAGCCCCGGTGGAGCCAAGCGGAGAAGGACGTAGGCCAAGCCACCAGGAGGCGCCCTCGAGATATCATCCACTGCAGAGAGCAGGAGAcaccagggagaggaggagagacctgggACTGGAGAGACTAATCTGTGAAGcctggagggaagaggagggagagaatgacAGGAGAGTGACATTTTATGAGTAATAGATTATAGAGCTATTTGGACAATGCTGAATTTGTGGACAGGTATCCAGGATACCTCATGAAGAACTTTTAAGCCCACAGAAGCTGTAATTTTAGTATGTTGGGTTTTCTCAGAACAACTAGAAAGATGTAGCATTCCCTGTTGCCACACAATCTCTGAAAGCCACACTGCAAAAGCAGTGTGATGACTACAACACTGAATCGTATCGGTCATGATGATCAATATACTGTCACAGCATCTGGTATATTTGGACCATCCCGTCCCACCAGTCCTCAGCTGTGCTGTGGATCAGAGGCCAGCATGACAATTTACTAATATTGACACAATTCAAGCTGACGCATATCAATGCTTCTGCATTGATGTCAGAATAAGTGTAATGGTACTAGTGCTTGTGTTATGTGAAGTTCTCTTGTTTGGCCTTGGAGAAATGCTGGACTACTAAATCCAATCAATACACTGTATGTGACTGGCTGGACGCTTGCATTAATTCATTGTCATTTTTTTTAGTTCTGAACTGTTACAAGTGGTTATAAACAAATGTATAGAGCTACTCATGGTAGTGTACCTCATCCACCTCTTCcagtgactgcaaccagatggtCATTGTGCCTCCTTATATCTGTATAAACTGTAGTTGCCAGTGGTGCAAAATGTTGTTAACTTTTTTTCCCACAGTCATTATTtgatgtaattttgtccttgggGAATATTAAATCAGCATGTTTTGGTAATCGCTCCAAAtgattttttttgtctgtctCAATGACTGACTTCTCagaatcaaataaaacaatgtgtAGCTGTAGTCTCCACCCATGTGAGATATGTTATTTTGTTTGTCTATTTATTTGACATGCTTCATTTTAAGGCATTAAATATGAGTTTGGACTAA
>XM_021616035.2
TGCCCTGTCTAAATGTAGCCTGGTCACATATACACATTGTAGGCCTACTTTACCGAGGTTTGTGCACATGCAAAATAATACATTTCAAAAATGATATTATTATAGCAAGCCTATCAAAGTATTGTATGTATTGTATCAAACATCTCTGGGTGAAAGCGCATCCCAGTTGGATAACCGTTTTACCAGTGATAGGGGCGCTGTTCTCTGTCCTGCTGGCAGTTTTATGTTATTGAAAGAGAACAACAGCATGGGGGAAGCCGAGGTTGTTCCAGCCGACGAAAAACAGGCAGACTCGGGGATCAGTCACATCGAAGACTCGGTGGTATGGAGTCAAGAAGTCGAGGTGTGCCTGTTCCATGCAATGCTAGGTCACAAACCCGTAGGGGTAAATCGTCACTTTCACATGATCTGCATCCGGGATAAATTCAGCCAGAATATTGGGAGGCAAGTGTCATCAAAGGTGATCTGGGACCACCTGGGAACTATGTATGACATGTCAGCCTTGCATGAGTCTGAAATATTGCCGTTTCCCAACTCAGAGAAGAGCTTCAATCTTCCAGACGAGATTATTCAACAAGTAAAAGAAGGTAAACTGGTATCCGAGGACGACGTGAAAGACGATTTCAAAGAAGAACGAGACCCCCCAGCCATGCATGAAGAAGGCAGCAACTCCTCAGTGAAGATGACAGAGAGGGTAGGCAGCAAAgacaaggacagagaaagagaccgagagaagGGTTCCGCTGAGGGCGGCCCGGGGAAGGAGGCAGCagacaagaggaagaggaacCGTGCCACTGAGAAGGTGCTCAACTCCAGCAGCAACCCCTCCAGCCCCGGTGGAGCCAAGCGGAGAAGGACGTAGGCCAAGCCACCAGGAGGCGCCCTCGAGATATCATCCACTGCAGAGAGCAGGAGAcaccagggagaggaggagagacctgggACTGGAGAGACTAATCTGTGAAGcctggagggaagaggagggagagaatgacAGGAGAGTGACATTTTATGAGTAATAGATTATAGAGCTATTTGGACAATGCTGAATTTGTGGACAGGTATCCAGGATACCTCATGAAGAACTTTTAAGCCCACAGAAGCTGTAATTTTAGTATGTTGGGTTTTCTCAGAACAACTAGAAAGATGTAGCATTCCCTGTTGCCACACAATCTCTGAAAGCCACACTGCAAAAGCAGTGTGATGACTACAACACTGAATCGTATCGGTCATGATGATCAATATACTGTCACAGCATCTGGTATATTTGGACCATCCCGTCCCACCAGTCCTCAGCTGTGCTGTGGATCAGAGGCCAGCATGACAATTTACTAATATTGACACAATTCAAGCTGACGCATATCAATGCTTCTGCATTGATGTCAGAATAAGTGTAATGGTACTAGTGCTTGTGTTATGTGAAGTTCTCTTGTTTGGCCTTGGAGAAATGCTGGACTACTAAATCCAATCAATACACTGTATGTGACTGGCTGGACGCTTGCATTAATTCATTGTCATTTTTTTTAGTTCTGAACTGTTACAAGTGGTTATAAACAAATGTATAGAGCTACTCATGGTAGTGTACCTCATCCACCTCTTCcagtgactgcaaccagatggtCATTGTGCCTCCTTATATCTGTATAAACTGTAGTTGCCAGTGGTGCAAAATGTTGTTAACTTTTTTTCCCACAGTCATTATTtgatgtaattttgtccttgggGAATATTAAATCAGCATGTTTTGGTAATCGCTCCAAAtgattttttttgtctgtctCAATGACTGACTTCTCagaatcaaataaaacaatgtgtAGCTGTAGTCTCCACCCATGTGAGATATGTTATTTTGTTTGTCTATTTATTTGACATGCTTCATTTTAAGGCATTAAATATGAGTTTGGACTAA

Function

symbol description
mrgbp Predicted to be involved in histone acetylation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Orthologous to human MRGBP (MRG domain binding protein).

NR:

description
MRG/MORF4L-binding protein-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043189 H4/H2A histone acetyltransferase complex cellular_component

KEGG:

id description
K11343 MRGBP; MRG-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616036.2 False 2083 mRNA 0.45 6 49163549 49167417
XM_021616035.2 True 1915 mRNA 0.44 5 49163560 49167417

Neighbor

gene id symbol gene type direction distance location
LOC110532286 LOC106572086 coding upstream 1860 49160447 ~ 49161689 (+)
LOC110532284 LOC106572089 coding upstream 65847 49085824 ~ 49097702 (+)
LOC110532283 LOC106572090 coding upstream 82374 49063688 ~ 49081175 (+)
LOC110532282 LOC106572092 coding upstream 103476 49013163 ~ 49060073 (+)
LOC110532278 LOC105027762 coding upstream 165264 48994635 ~ 48998285 (+)
LOC118966186 NA coding downstream 16964 49184381 ~ 49186162 (+)
sulf2b LOC106572085 coding downstream 145769 49313186 ~ 49493787 (+)
si:ch211-218g4.2 LOC106572084 coding downstream 326890 49494307 ~ 49591982 (+)
phf20b LOC106572082 coding downstream 448221 49615638 ~ 49639251 (+)
ndrg3b LOC106572081 coding downstream 472991 49640408 ~ 49716462 (+)
G813487 NA non-coding upstream 5088 49158166 ~ 49158461 (+)
G813160 NA non-coding upstream 12797 49150463 ~ 49150752 (+)
G813140 NA non-coding upstream 47462 49115683 ~ 49116087 (+)
G813137 NA non-coding upstream 57336 49105978 ~ 49106213 (+)
G813135 NA non-coding upstream 59729 49103583 ~ 49103820 (+)
G813500 NA non-coding downstream 2517 49169934 ~ 49170288 (+)
G813505 NA non-coding downstream 5295 49172712 ~ 49172952 (+)
G813507 NA non-coding downstream 6153 49173570 ~ 49173789 (+)
G813510 NA non-coding downstream 7781 49175198 ~ 49175417 (+)
G813524 NA non-coding downstream 14351 49181768 ~ 49181975 (+)
G813139 NA other upstream 47931 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 156839 48962187 ~ 49006710 (+)
G813071 NA other upstream 203558 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 592956 48545454 ~ 48570593 (+)
G812143 NA other upstream 1181248 47982001 ~ 47982301 (+)
G815428 NA other downstream 1628797 50796214 ~ 50800381 (+)
G815610 NA other downstream 1911030 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 2177955 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 3155854 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3559004 52692676 ~ 52734929 (+)

Expression


Co-expression Network