Item | Value |
---|---|
gene id | si:dkey-178k16.1 |
gene name | LOC106572064 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 50445552 ~ 50557497 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
band 4.1-like protein 1 isoform X3 |
id | description |
---|---|
K23961 | EPB41L1_2_3; band 4.1-like protein 1/2/3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005053279.1 | False | 3590 | mRNA | 0.54 | 22 | 50445552 | 50556296 |
XM_036988244.1 | False | 4330 | mRNA | 0.52 | 22 | 50445552 | 50557497 |
XM_036988245.1 | False | 4327 | mRNA | 0.52 | 22 | 50445552 | 50557497 |
XM_036988246.1 | True | 4288 | mRNA | 0.52 | 21 | 50445552 | 50557497 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118966068 | NA | coding | upstream | 17458 | 50423446 ~ 50428094 (+) |
fam217b | LOC106572066 | coding | upstream | 37182 | 50402564 ~ 50408370 (+) |
LOC110532305 | LOC106572068 | coding | upstream | 86189 | 50224844 ~ 50359369 (+) |
LOC110532304 | LOC106566492 | coding | upstream | 240546 | 50138196 ~ 50205006 (+) |
si:dkey-8e10.3 | LOC106572072 | coding | upstream | 476821 | 49956841 ~ 49968731 (+) |
cntn3a.2 | LOC106572060 | coding | downstream | 408220 | 50965717 ~ 51041645 (+) |
exosc10 | exosc10 | coding | downstream | 486918 | 51044415 ~ 51056932 (+) |
srm | srm | coding | downstream | 503575 | 51061072 ~ 51067904 (+) |
cort | LOC106572313 | coding | downstream | 548830 | 51106327 ~ 51107746 (+) |
LOC110531197 | NA | coding | downstream | 567638 | 51125135 ~ 51127512 (+) |
G814631 | NA | non-coding | upstream | 8286 | 50437037 ~ 50437266 (+) |
G814628 | NA | non-coding | upstream | 10614 | 50434723 ~ 50434938 (+) |
G814626 | NA | non-coding | upstream | 11774 | 50433562 ~ 50433778 (+) |
G814624 | NA | non-coding | upstream | 13462 | 50431890 ~ 50432090 (+) |
G814621 | NA | non-coding | upstream | 22578 | 50422643 ~ 50422974 (+) |
G815404 | NA | non-coding | downstream | 210487 | 50767984 ~ 50768212 (+) |
G815407 | NA | non-coding | downstream | 215615 | 50773112 ~ 50773312 (+) |
G815423 | NA | non-coding | downstream | 235242 | 50792739 ~ 50792971 (+) |
G815426 | NA | non-coding | downstream | 237717 | 50795214 ~ 50795433 (+) |
G815427 | NA | non-coding | downstream | 238178 | 50795675 ~ 50796164 (+) |
G813139 | NA | other | upstream | 1329934 | 49115137 ~ 49115618 (+) |
G813074 | etbr2 | other | upstream | 1438842 | 48962187 ~ 49006710 (+) |
G813071 | NA | other | upstream | 1485561 | 48959749 ~ 48959991 (+) |
G812688 | LOC106572106 | other | upstream | 1874959 | 48545454 ~ 48570593 (+) |
G812143 | NA | other | upstream | 2463251 | 47982001 ~ 47982301 (+) |
G815428 | NA | other | downstream | 238717 | 50796214 ~ 50800381 (+) |
G815610 | NA | other | downstream | 520950 | 51078447 ~ 51078942 (+) |
G815767 | casz1 | other | downstream | 787875 | 51345372 ~ 51346494 (+) |
LOC110532349 | LOC106591969 | other | downstream | 1765774 | 52323001 ~ 52325924 (+) |
LOC110532368 | LOC106572016 | other | downstream | 2168924 | 52692676 ~ 52734929 (+) |