XLOC_026727 (CR385086.1)



Basic Information


Item Value
gene id XLOC_026727
gene name CR385086.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 46757611 ~ 46762706 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052040
AGAAACACCTGACGAACGCGGCTGTGCTTCCTGTGCTCCGTGCCCCAGCCTTAGTCTCCTCGGTGGGTGAGTGTCCGCAGGTGGAGCCGGTCTCCATCCACGGCCGGAGTGTTGAGGAATATCAGCAAATCTACAACAGTGTGATGGGCTCCACCATCCAGAAGAGACGTCGTGGCCGGTACAACCTACAACAAGGTCTCgagatcaagcagcggctgtgggagaagCTGGGCCGGCCTGCACTCCTGGAAACCGTGCAGCCTGATGGACGAGTGTTCATCACAGAGGTCAGATCCAAGTCCAGCGTTGCTCCTCAAATCACGGTGGACATCAGTGAGGAGCCACTGCCCAAGGAGCCCCCAAGGAAGAAGCCCAGGCACTGAGTCATCCTAGTGCCAGATGAAAGATCATGGGCACTAATGCTGGTTATTAAAGGATACAGAAGGACAGACGTGACGCTATACATCTACATGAAAGAGTCATAAGGATAGATTATGAAAGCTGTATGCTGCAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096931

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052040 True 514 lncRNA 0.54 2 46757611 46762706

Neighbor


gene id symbol gene type direction distance location
XLOC_026726 NA coding downstream 294355 46462585 ~ 46463256 (-)
XLOC_026725 cdip1 coding downstream 347224 46387860 ~ 46410387 (-)
XLOC_026724 snrnp25 coding downstream 377711 46377305 ~ 46379900 (-)
XLOC_026723 CR450782.1 coding downstream 530601 46224589 ~ 46227010 (-)
XLOC_026722 NA coding downstream 540138 46153127 ~ 46217473 (-)
XLOC_026728 elavl3 coding upstream 37484 46800190 ~ 46818001 (-)
XLOC_026729 CR392045.1 coding upstream 156816 46919522 ~ 47105267 (-)
XLOC_026730 qtrt1 coding upstream 351622 47114328 ~ 47128096 (-)
XLOC_026731 NA coding upstream 367326 47130032 ~ 47131111 (-)
XLOC_026732 NA coding upstream 432032 47194738 ~ 47196960 (-)
XLOC_026719 NA non-coding downstream 913911 45832077 ~ 45843700 (-)
XLOC_026716 NA non-coding downstream 1214160 45539786 ~ 45543451 (-)
XLOC_026736 NA non-coding upstream 1064496 47827202 ~ 47833114 (-)
XLOC_026738 NA non-coding upstream 1560834 48323540 ~ 48328133 (-)
XLOC_026739 NA non-coding upstream 1698791 48461497 ~ 48473754 (-)

Expression



Co-expression Network