XLOC_002673


Basic Information

Item Value
gene id XLOC_002673
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17006225 ~ 17010898 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005757
GTTTAGCATTAAAGTCATGCAGGTCTTACAAAGGTGTCGTTTCCTTGAGGAAGGATGATGGTTTTCTCTAGACTGTTCATGACGATCCTCCATAGCTCCTTCAGGACTCTCTTCAGCACAGTTTTCTCACACACAGAGGCAAACAGCATCAGGCTgagaacaaacatacaaaaacatcaGTAAACACTTCAGGAAAATGCGAGTTTACAGTTTAACTCACTTTGCATCCAGGAAGTCCATCAGCGGCCGCAGCATGTTGTCAGAATCGGCCTCCACCTGGTTCTTGTTGTTGGTGTTGACTGGACCCTTAATCTGGTAAAGCAGACTGGCCATCTGACGCATGCAGTCATCAATACGACTCTGGAAACTACAGAGGAAACATGAAAGGAGAGAAATGAGATGAAGGTCACAGTGAGCGTCTGCTGGAGGCTCGAGGAGCGGATGGGAGTTCACACACAGTTCAGACTGACTGAGGGACAGCACAACTCAACGGGACGCTCGGGAGATTGCTGGATTAAAAGGACAAAAACGGATGAAAGACGAGCACGGATGATCCCAATAACAAACCTCCAGTAACTCCTCATCCTCCTCGTCCTCACTCTCCTCCAGCTGGGGACAGAAGCCAGATCATACATTCAGACCGAAGCAAATGTTTGCGCGCAGAGCTTTTGTAAACAAGTAGCTGTCATTACTTGGCCAGGAGGTGTCACTGCAGAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005757 True 718 lncRNA 0.48 2 17006225 17010898

Neighbor

gene id symbol gene type direction distance location
XLOC_002672 stoml2 coding downstream 138014 16857529 ~ 16868211 (-)
XLOC_002671 fbn2a coding downstream 510628 16313851 ~ 16495597 (-)
XLOC_002670 si:dkey-184a18.5 coding downstream 939031 16061655 ~ 16067194 (-)
XLOC_002669 aldh7a1 coding downstream 978143 16006905 ~ 16028082 (-)
XLOC_002668 pip5k1ba coding downstream 1042196 15881309 ~ 15964029 (-)
XLOC_002674 NA coding upstream 5901 17016799 ~ 17027111 (-)
XLOC_002675 fam166b coding upstream 66279 17077177 ~ 17083377 (-)
XLOC_002676 NA coding upstream 74626 17085524 ~ 17088911 (-)
XLOC_002677 RNF208 coding upstream 92004 17102902 ~ 17103651 (-)
XLOC_002678 BX324123.4 coding upstream 93400 17104298 ~ 17132910 (-)
XLOC_002666 NA non-coding downstream 1282121 15716739 ~ 15724104 (-)
XLOC_002660 CT027832.1 non-coding downstream 1919928 15082410 ~ 15086297 (-)
XLOC_002656 NA non-coding downstream 1963477 15031006 ~ 15042748 (-)
XLOC_002657 NA non-coding downstream 1971265 15032972 ~ 15034960 (-)
XLOC_002653 CT027820.1 non-coding downstream 2273826 14732283 ~ 14732399 (-)
XLOC_002684 FP091248.1 non-coding upstream 331467 17342365 ~ 17342481 (-)
XLOC_002685 NA non-coding upstream 426592 17437490 ~ 17442421 (-)

Expression


Co-expression Network