LOC110531201


Basic Information

Item Value
gene id LOC110531201
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 52681511 ~ 52684202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986953.1
ctgCCCATGACTCTGACCTATGAACAGCACAATGAATGAGCAAAGCTCAGTGTTATTTAATCATAGGGACATAAACAGCCGAGGTAGAAATTTACATTTTGAAATTATTGAAGTATCCTGTCAATTGATAAGCGGGCGTGGTCTTATCTTTTATCGAAATATAATTGTTGCTATGAAATTACCTATTTCCGAAAATAGCCTATAATTTCAACAGGTTTGATATCGAAACTATAGATATAGGGAAACGTTAGGCTAATATTGAAGCGATTTACCGCAAATGTTATCCTTCATTACCTAATTTCTTCCGAGTTTATCAGGATGGCTAACGCTGGACGCAAACCCTCTGGACAGTCTACTCTAAGGTGAGATTTGTGTATCGTTCTCTAGGCTACCCCAGGTAGGTCGGCGCTTGGCCTGATCCTTTCTTGGTTTATTGTAAATGCCCTTTTGCAGGTTACCACTCATGCTGTAGTCTACCTTTATTTGAAGAACCATTTTGTTGAATACGTCAATTTTGGAGATGTCAGGTGATCAAATATTCTTGGTAATATACAGGACTGCGCATGTGGGATCTCTGCTCTCTGTAACCTGATGACAGTACACTTAATTCTTAAAGGCTGAAAGGTGAGAAACGTATACGCCAATGGTAATGTCCCGAAAGATCATATGAGAAGACATGATTCCACGTGTCTCAGTAACGAGTGTATAATAATACCTATGTTATTACATGTTAGTTACATAGGTAGCTTCAGTGTATAGGTTAGGCTATATTGTTAGCTGTTATACTTGTTTCACACGTTACAATTTTACATCCATTTGACTAGCAAACAAACTCGAAATCGATTGTTGCTAAACCTCCTCTTGCCCTAGAATTATAATCTGAATGCAATTACCATTTCATAGATAGGGAGGGACtcataaaaaacaaacacttgAGAAGTGGACCAAAGGATATCCAAGATGTGGATGTGGATAACTGTCATTTTCCCTACTAACCTTAGGACTATTGATGTACAGTTTACTAATTTGTGCTGTTGAATAACATGCTTCTATTCATCACTATGAACAGACTGTTATACGATTTACATTGGCAACAGTAATCAATGTATCCTTAGAAatcattgttttgtatttcactgCCTTGAAATGTATACTGTCTCAAGTTACTCTCTCTACTCAGTTCAAATAATGACGGCAGCAGTAGAGATACATCTATGCAGAAAATACCAAGGCATCAAGCCAGTACTAAAATTGGGCTAAGTGAAGCTCTCCAGTTCTTGTTCCTGCCGGTGATGCAGTCTGTAGTGGGCTCTCGGGTTGCATCCCTGGTGGTTCTAGAGTTCTCCCTCAGAACAATGTCAGCTGAGTCCAGTAGGTTCCTACAGCAGCTGCTGGTCcaatgtagcctagtgTTCTCCTTGGGCTGTGCTCTCAGCTGCGGTCTCCATTTTCTCCACGAGGGGGCGCCACAGCTCCGGCTCTGCCTGCTCCTCGCTGCAGAACTGAGCTGGTTCCTGGGCGCCTACGACTCCATGTCATGGCACTGCACAGACTACACagtctactgtgttactgtggaGTTCTGGACTCCACTGACAATCTGCTACACACTGCTGGTGGTGTATATGCAGGGTGAGAGACTGAACATACAAAAGCTGATGATAATTATTTTCTACTCTTGGGGGAGGCTCATGGTCCTGATGCTGATTGTCGGCCGCTGGGCAGATGTGGTCCACATCATCCTGTGCTTCCTCGGTGAGGCTAGCTGTCTGATACCCTCCAGAGACCTATTGGATGCTACAACACAGGATATGGAGGAAGTTACCAGTTACCACATTCTCAGAGGAGTAAGAACCAGAGGAGATGCCTGACACCTGGCAAAGACCACCAGAGTTAGACTAATTGACATGGGAAGAAACTGTTTGTGCTGGGACTCTTAGAGCATCAGTCTTCGattatattttgtattattattgattatcagtggtgtaaagtacttaaataaaaaatagtttaaagtactacttaagtgttTTTTGTACT

Function

NR:

description
transmembrane protein 82-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986953.1 True 2043 mRNA 0.42 6 52681511 52684202

Neighbor

gene id symbol gene type direction distance location
LOC110532366 NA coding upstream 18202 52659674 ~ 52663309 (+)
LOC110532365 LOC106572021 coding upstream 60431 52606443 ~ 52621080 (+)
vwa1 LOC106572023 coding upstream 113986 52550127 ~ 52567525 (+)
htr6 LOC106572282 coding upstream 167048 52513511 ~ 52514463 (+)
LOC118936401 LOC106566850 coding upstream 176917 52502997 ~ 52504594 (+)
LOC110532368 LOC106572016 coding downstream 8474 52692676 ~ 52734929 (+)
LOC110532370 LOC106572015 coding downstream 66011 52750213 ~ 52787156 (+)
LOC110532371 LOC106572012 coding downstream 132507 52816709 ~ 52833078 (+)
LOC110532373 LOC106572011 coding downstream 170633 52854835 ~ 52859251 (+)
LOC110532374 LOC106572009 coding downstream 175414 52859616 ~ 52912527 (+)
G817021 NA non-coding upstream 26585 52654659 ~ 52654926 (+)
G817016 NA non-coding upstream 34355 52646934 ~ 52647156 (+)
G816989 NA non-coding upstream 84472 52596812 ~ 52597039 (+)
G816988 NA non-coding upstream 84927 52595984 ~ 52596584 (+)
G817215 NA non-coding downstream 348937 53033139 ~ 53033358 (+)
G817221 NA non-coding downstream 353927 53038129 ~ 53038474 (+)
G817222 NA non-coding downstream 355313 53039515 ~ 53040495 (+)
G817307 NA non-coding downstream 571109 53255311 ~ 53256967 (+)
G817278 NA non-coding downstream 583738 53267940 ~ 53268576 (+)
LOC110532349 LOC106591969 other upstream 355871 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 1335017 51345372 ~ 51346494 (+)
G815610 NA other upstream 1602569 51078447 ~ 51078942 (+)
G815428 NA other upstream 1881130 50796214 ~ 50800381 (+)
G813139 NA other upstream 3565893 49115137 ~ 49115618 (+)
G819897 NA other downstream 2042669 54726871 ~ 54727376 (+)
G820665 NA other downstream 2549056 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 2846835 55531033 ~ 55647541 (+)
G820944 NA other downstream 3013438 55697640 ~ 55697978 (+)

Expression


Co-expression Network