LOC110532485


Basic Information

Item Value
gene id LOC110532485
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58433121 ~ 58447861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474838.2
tgggatttgcaCTTTCGGTTACtcgtccaacactctaaccactaggccacaaTAAAgcagtcccACACAGCCCACAGGCTCAGCCTCAGCCATGTCTGCCCCGCCAGGAGAGACTGAGCGGTCTGCCACGCCATCAGTCAGCCATGTGCTGAAGGGGTGGATTAAACCAACGTACTCTGGACCCATCTAAGAGGTAGATTTCCTCTCCTTGCACTTCACCATTCATCTTGAGTCGCTCACTTCATcattcctctttttctctctctctgtctttctctctatctaggcggcaggtagcctagaggttagagttttgggccagtaaccgaaaggttgctggattgaatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474838.2 True 349 mRNA 0.51 3 58433121 58447861

Neighbor

gene id symbol gene type direction distance location
LOC110532483 NA coding upstream 25162 58406145 ~ 58407959 (+)
LOC110532478 LOC106572378 coding upstream 43677 58385510 ~ 58390570 (+)
LOC110532475 LOC106572379 coding upstream 50210 58360773 ~ 58382911 (+)
LOC110532474 LOC106572383 coding upstream 101558 58321601 ~ 58331563 (+)
LOC110532471 LOC106572384 coding upstream 111771 58298773 ~ 58321350 (+)
LOC110532488 LOC106572433 coding downstream 70 58447931 ~ 58496358 (+)
LOC110532490 LOC106572439 coding downstream 208416 58656277 ~ 58665931 (+)
LOC110532492 LOC106572441 coding downstream 220229 58668090 ~ 58671251 (+)
LOC110532491 LOC106572442 coding downstream 223493 58671354 ~ 58674299 (+)
LOC110531219 LOC106572493 coding downstream 236409 58684149 ~ 58720758 (+)
G823569 NA non-coding upstream 19497 58410256 ~ 58413624 (+)
G823498 NA non-coding upstream 41378 58390849 ~ 58391743 (+)
G823556 NA non-coding upstream 85182 58347588 ~ 58347939 (+)
G823554 NA non-coding upstream 86579 58341403 ~ 58346542 (+)
G823579 NA non-coding downstream 48891 58496752 ~ 58497838 (+)
G823587 LOC106572434 non-coding downstream 89583 58537444 ~ 58538992 (+)
G824487 NA non-coding downstream 188712 58636573 ~ 58636827 (+)
G824495 NA non-coding downstream 193425 58641286 ~ 58641558 (+)
G823459 LOC106572386 other upstream 182814 58216176 ~ 58250307 (+)
G823467 NA other upstream 188137 58205263 ~ 58244984 (+)
G823373 NA other upstream 404264 58028619 ~ 58028857 (+)
LOC110532462 LOC106572392 other upstream 517587 57342345 ~ 57958962 (+)
G823580 LOC106567312 other downstream 71358 58519219 ~ 58535643 (+)
fkb1a fkb1a other downstream 406984 58854845 ~ 58856718 (+)
ppdpfa LOC106572462 other downstream 577339 59025174 ~ 59028152 (+)

Expression


Co-expression Network