plp2 (LOC106572444)


Basic Information

Item Value
gene id plp2
gene name LOC106572444
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58745833 ~ 58755855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616453.2
ACAGAAACAGTTATAATCACAGCAACAGTTGGAGCAAACTgtcttccaccaccaccacctaaaTCTCTAGAGAAAAGTTAAAGCCAACGCCCCGTTTGCCCGTCTTTACTCCCTCCTTCCAATTTTGTTCTCTAGTCCAGGAAGTTGCCATTACTCACCCATTCGAAGGAGTCGCAAGttggagagaagaaaaaaaaacgaagttAGGAGGCAACAGCAGTCCGCTTTTTCCTTACTGAATGTAACTTGTGTCTTCGTTGAGTTGTGCAACTTTGCAATATTCAGCCATTATACTTAACTGGTAAATTATACATTTAATTTCGTTATGGCTGATACAGAGGCCAGTGTCGCTGCGGGCTGCCTGGAGAAACTCAAGGGCTACGTGAAGACCCGAAAAGGAACTATTCTTGCTGCAGAAATACTCATCAGTTTTATTATCCTAATCTGCTATGCTGCATCATTGTATGGAGGTTATTCTGCAGTGGCCATCTGTGAGATGGTGTTCGCCATCATCTTCTTTGTCGTCTTCATGATGGAAATGGACAAGTCCATCCAGGTGGTCAACTGGGTCTGGAGtGATCTTATCCGTGCTGCTATTGGTGCAGCCCTGTACCTTATCACCTCTCTGATCTGTGTGATTGGTGGAGCCGGGGACGGCGCCCGTATTGCAGGAGGGGTGTTTGGCCTGCTGGCTGGGATCCTGTTTTCCTATGATGCCTACACCATCTTTCTGGTCATCAAGAGCACCAGGCAGCACACAGCAGCGCCCACTGACGACAGAGTTTAAGCACTCAAAgctataccccccccccaaaaaagaaaaaGGAAGTTTGTGCAGGAGGAGTCGAaaatgaagagagaaagaagtgCAGCAGATTGGAAGGAATTTGATGCTCAAATGAAAGGATTAATAGCAGCAATTAACCAATGTTAGGGTCAGAAGAGAGAAACATCTGCAGTACATCTATAGCTGACCCAGAGGAGAATGTTACTGCATTGAGATCTGCGTGTTCAAAATAATTATGTCAATTCAAGGAGGGATTCCCTTGACAAAGGGTTATTCTAGTCTCTGTGTACAATTCTACCATCTACCGAAAAGGGAAAGATGTAAATATTATGCAGCATAAGGAGGTGAAAAGCTTTGGTCAGTTTTCATACATTTGTTTTCTgatctaattaattaattaattaattaattaatgtgtCAAAAGATGTCTGTTTGTATTACATCCACTACTAAAGGTTTGGTTTATTAGTAATGAAATTGTAGCATTACATCCATAGAGGTGCTCAgattaataaaacattaaaatGTAACATCAGCTGTTTACCTTTGCAGTTTTAGTACAAATTACTTCAAACAGCATTCTATCTTTCTGCTTCATCAACATTTCACCTCAGCGGCAAAGCCCTCTCAATATTCGCGCTGTAATATATTATAATTGTGCTGGTCAAATTTAGCCGTAAATTTAGCCAAATTCATTCTGCCCCCATAGTAAGGTTAGATGTTCCTTTGCCACCAAAGAACTTGTCGTTAGTAGGCTACTCTTGCCATAGGAAACACACATGTTTTCATCATCCTGGTTTTCACAAATCTAACTCAGGTTGTGTGTTTCTTGcctgtatttgtgtgtttttttaaccaatggtaaaaaatatattttaatgccATTTTGTGTTGTACAAGAGAAATGTTACCTCAGTAAGTGCACCGTTGTTAAGGGATATAGACAGTCTGTATGCGGTTATAGTAAACTCTTAGAAAATTGTTTATTTAGAATTAGCAGTTAAATTAATTAGCAGAGAAGATTATTTTATCAATTGTGTGGTTGGCATTTCAGGATCCATATGTTATTTTAATATGCTTTAGTAAATGCTACCTTGCCTCCGAAATATAAAATTAATGTTTCAAGGTATAATTTGGCCTCTGTTTTATTTCTAACAGGATTTTTTTATTTCTTGTTTCATCCTTTTTGTGTGTTTTGAAACACTGAGGCATTCACAATGCTTTGCACAATAAAAGCCATTTGTTTCTCTAAATAA
>XM_021616454.2
ACAGAAACAGTTATAATCACAGCAACAGTTGGAGCAAACTgtcttccaccaccaccacctaaaTCTCTAGAGAAAAGTTAAAGCCAACGCCCCGTTTGCCCGTCTTTACTCCCTCCTTCCAATTTTGTTCTCTAGTCCAGGAAGTTGCCATTACTCACCCATTCGAAGGAGTCGCAAGttggagagaagaaaaaaaaacgaagttAGGAGGCAACAGCAGTCCGCTTTTTCCTTACTGAATGTAACTTGTGTCTTCGTTGAGTTGTGCAACTTTGCAATATTCAGCCATTATACTTAACTGGTAAATTATACATTTAATTTCGTTATGGCTGATACAGAGGCCAGTGTCGCTGCGGGCTGCCTGGAGAAACTCAAGGGCTACGTGAAGACCCGAAAAGGAACTATTCTTGCTGCAGAAATACTCATCAGTTTTATTATCCTAATCTGCTATGCTGCATCATTGTATGGAGGTTATTCTGCAGTGGCCATCTGTGAGATGGTGTTCGCCATCATCTTCTTTGTCGTCTTCATGATGGAAATGGACAAGTCCATCCAGGTGGTCAACTGGGTCTGGAGtGATCTTATCCGTGCTGCTATTGGTGCAGCCCTGTACCTTATCACCTCTCTGATCTGTGTGATTGGTGGAGCCGGGGACGGCGCCCGTATTGCAGGAGGGGTGTTTGGCCTGCTGGCTGGGATCCTGTTTTCCTATGATGCCTACACCATCTTTCTGGTCATCAAGAGCACCAGGCAGCACACAGCAGCGCCCACTGGTGGGTGATTTAGATAAGACGACAGAGTTTAAGCACTCAAAgctataccccccccccaaaaaagaaaaaGGAAGTTTGTGCAGGAGGAGTCGAaaatgaagagagaaagaagtgCAGCAGATTGGAAGGAATTTGATGCTCAAATGAAAGGATTAATAGCAGCAATTAACCAATGTTAGGGTCAGAAGAGAGAAACATCTGCAGTACATCTATAGCTGACCCAGAGGAGAATGTTACTGCATTGAGATCTGCGTGTTCAAAATAATTATGTCAATTCAAGGAGGGATTCCCTTGACAAAGGGTTATTCTAGTCTCTGTGTACAATTCTACCATCTACCGAAAAGGGAAAGATGTAAATATTATGCAGCATAAGGAGGTGAAAAGCTTTGGTCAGTTTTCATACATTTGTTTTCTgatctaattaattaattaattaattaattaatgtgtCAAAAGATGTCTGTTTGTATTACATCCACTACTAAAGGTTTGGTTTATTAGTAATGAAATTGTAGCATTACATCCATAGAGGTGCTCAgattaataaaacattaaaatGTAACATCAGCTGTTTACCTTTGCAGTTTTAGTACAAATTACTTCAAACAGCATTCTATCTTTCTGCTTCATCAACATTTCACCTCAGCGGCAAAGCCCTCTCAATATTCGCGCTGTAATATATTATAATTGTGCTGGTCAAATTTAGCCGTAAATTTAGCCAAATTCATTCTGCCCCCATAGTAAGGTTAGATGTTCCTTTGCCACCAAAGAACTTGTCGTTAGTAGGCTACTCTTGCCATAGGAAACACACATGTTTTCATCATCCTGGTTTTCACAAATCTAACTCAGGTTGTGTGTTTCTTGcctgtatttgtgtgtttttttaaccaatggtaaaaaatatattttaatgccATTTTGTGTTGTACAAGAGAAATGTTACCTCAGTAAGTGCACCGTTGTTAAGGGATATAGACAGTCTGTATGCGGTTATAGTAAACTCTTAGAAAATTGTTTATTTAGAATTAGCAGTTAAATTAATTAGCAGAGAAGATTATTTTATCAATTGTGTGGTTGGCATTTCAGGATCCATATGTTATTTTAATATGCTTTAGTAAATGCTACCTTGCCTCCGAAATATAAAATTAATGTTTCAAGGTATAATTTGGCCTCTGTTTTATTTCTAACAGGATTTTTTTATTTCTTGTTTCATCCTTTTTGTGTGTTTTGAAACACTGAGGCATTCACAATGCTTTGCACAATAAAAGCCATTTGTTTCTCTAAATAA

Function

NR:

description
proteolipid protein 2-like isoform X2

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616453.2 False 2043 mRNA 0.39 5 58745833 58755855
XM_021616454.2 True 2061 mRNA 0.39 5 58745833 58755855

Neighbor

gene id symbol gene type direction distance location
LOC110532493 LOC106572443 coding upstream 4563 58728598 ~ 58741270 (+)
LOC110531219 LOC106572493 coding upstream 25075 58684149 ~ 58720758 (+)
LOC110532491 LOC106572442 coding upstream 71534 58671354 ~ 58674299 (+)
LOC110532492 LOC106572441 coding upstream 74885 58668090 ~ 58671251 (+)
LOC110532490 LOC106572439 coding upstream 79902 58656277 ~ 58665931 (+)
prickle3 LOC106572445 coding downstream 7810 58763665 ~ 58814538 (+)
LOC110532497 LOC106572446 coding downstream 61149 58817004 ~ 58823053 (+)
LOC110531221 NA coding downstream 66277 58822132 ~ 58843304 (+)
fkb1a fkb1a coding downstream 99026 58854845 ~ 58856718 (+)
LOC110532502 LOC106572453 coding downstream 172164 58928019 ~ 58937708 (+)
G824549 NA non-coding upstream 299 58745293 ~ 58745534 (+)
G824524 NA non-coding upstream 67404 58678195 ~ 58678429 (+)
G824523 NA non-coding upstream 67853 58677693 ~ 58677980 (+)
G824495 NA non-coding upstream 104275 58641286 ~ 58641558 (+)
G824590 NA non-coding downstream 42027 58797882 ~ 58800399 (+)
G824598 NA non-coding downstream 91590 58847445 ~ 58851453 (+)
G824616 NA non-coding downstream 104275 58860130 ~ 58861007 (+)
G824617 NA non-coding downstream 105272 58861127 ~ 58863014 (+)
G824618 NA non-coding downstream 107287 58863142 ~ 58863399 (+)
G823580 LOC106567312 other upstream 210190 58519219 ~ 58535643 (+)
LOC110532478 LOC106572378 other upstream 355263 58385510 ~ 58390570 (+)
G823459 LOC106572386 other upstream 495526 58216176 ~ 58250307 (+)
ppdpfa LOC106572462 other downstream 269345 59025174 ~ 59028152 (+)
LOC118966079 NA other downstream 402726 59158581 ~ 59161748 (+)
LOC110532530 LOC106572481 other downstream 621251 59374974 ~ 59382411 (+)
G824936 NA other downstream 658292 59414147 ~ 59415013 (+)

Expression


Co-expression Network