Item | Value |
---|---|
gene id | uckl1a |
gene name | LOC106572454 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 58937789 ~ 58947479 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uridine-cytidine kinase-like 1 isoform X1 |
id | name | namespace |
---|---|---|
GO:0044206 | UMP salvage | biological_process |
GO:0044211 | CTP salvage | biological_process |
GO:0016310 | phosphorylation | biological_process |
GO:0005524 | ATP binding | molecular_function |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
GO:0004849 | uridine kinase activity | molecular_function |
id | description |
---|---|
K00876 | udk, UCK; uridine kinase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021616465.2 | False | 4199 | mRNA | 0.43 | 15 | 58937789 | 58947479 |
XM_036988522.1 | False | 4524 | mRNA | 0.43 | 15 | 58937922 | 58947479 |
XM_036988523.1 | False | 4480 | mRNA | 0.43 | 15 | 58937922 | 58947479 |
XM_021616464.2 | True | 4901 | mRNA | 0.44 | 15 | 58938391 | 58947479 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110532502 | LOC106572453 | coding | upstream | 81 | 58928019 ~ 58937708 (+) |
fkb1a | fkb1a | coding | upstream | 81071 | 58854845 ~ 58856718 (+) |
LOC110531221 | NA | coding | upstream | 94485 | 58822132 ~ 58843304 (+) |
LOC110532497 | LOC106572446 | coding | upstream | 114736 | 58817004 ~ 58823053 (+) |
prickle3 | LOC106572445 | coding | upstream | 123251 | 58763665 ~ 58814538 (+) |
LOC110532505 | LOC106572456 | coding | downstream | 18147 | 58965626 ~ 58973628 (+) |
LOC110532506 | LOC106572457 | coding | downstream | 27990 | 58975469 ~ 58982674 (+) |
LOC110532510 | LOC106572461 | coding | downstream | 66083 | 59013562 ~ 59018678 (+) |
LOC110532511 | LOC106572500 | coding | downstream | 71359 | 59018838 ~ 59024572 (+) |
ppdpfa | LOC106572462 | coding | downstream | 77695 | 59025174 ~ 59028152 (+) |
G824640 | NA | non-coding | upstream | 35231 | 58894243 ~ 58902558 (+) |
G824619 | NA | non-coding | upstream | 73282 | 58863920 ~ 58864507 (+) |
G824618 | NA | non-coding | upstream | 74390 | 58863142 ~ 58863399 (+) |
G824617 | NA | non-coding | upstream | 74775 | 58861127 ~ 58863014 (+) |
G824616 | NA | non-coding | upstream | 76782 | 58860130 ~ 58861007 (+) |
G824675 | NA | non-coding | downstream | 26423 | 58973902 ~ 58974353 (+) |
G824706 | NA | non-coding | downstream | 81681 | 59029160 ~ 59029985 (+) |
G824707 | NA | non-coding | downstream | 82724 | 59030203 ~ 59030468 (+) |
G824755 | NA | non-coding | downstream | 191169 | 59138648 ~ 59139540 (+) |
G824753 | NA | non-coding | downstream | 196799 | 59144278 ~ 59145748 (+) |
LOC110531219 | LOC106572493 | other | upstream | 253279 | 58684149 ~ 58720758 (+) |
LOC110532492 | LOC106572441 | other | upstream | 266538 | 58668090 ~ 58671251 (+) |
G823580 | LOC106567312 | other | upstream | 402146 | 58519219 ~ 58535643 (+) |
LOC110532478 | LOC106572378 | other | upstream | 547219 | 58385510 ~ 58390570 (+) |
LOC118966079 | NA | other | downstream | 211102 | 59158581 ~ 59161748 (+) |
LOC110532530 | LOC106572481 | other | downstream | 429627 | 59374974 ~ 59382411 (+) |
G824936 | NA | other | downstream | 466668 | 59414147 ~ 59415013 (+) |
G825484 | NA | other | downstream | 650550 | 59598029 ~ 59598970 (+) |