XLOC_026746 (BX769173.2)


Basic Information

Item Value
gene id XLOC_026746
gene name BX769173.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49010987 ~ 49015203 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052069
ATGGCAGAAGCAAGATTTTCTCAGGATGAGTTCTTGTGTCCAGTCTGTCTGGAACTTCTGAAGGATCCTGTGAGCCTCCACTGTGGACACAATTATTGTAAGGGCTGTATTAGCGGCTTCTGGGATCAGGAGGATGAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGTCAAAGACCTGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGGTGGAGAAGCTAAAGAAGACTAAACCTCCTGCTGACTGCAAAGCGGGAGCTGGAGATGTGCAGTGTGATGTCTGCACTGGAACAAAATACAAAGCCATCAAGTCCTGTCTGCAGTGTCAGGAATCTTACTGTCAAACTCATTTTGAGAACCATGAAGAGTTTCACTTTCGTAAATCACACAAAGTGATTGATGCAACTGGACAACTGCAGGACATGATCTGCCAGAAACATAAGAAAGAGCTAGAAATCTACTGTATCACTGACCAACAGTGCATCTGTGAGCTGTGTAAGGAGTTTGAACATACAACTCACGAAACACTATCAGTTGCAGAACAAAGGAAAGAGAAACAGAAAGAGCTGAAGGAGACACAGGTAAAGCTCCAGGAGAGTCTCCAGCAGAGACAGCAAGAACTTCAGCAGTTGAGGGAGGCAGTGGAATCTCATAAGGTAAGTCAGGAGAACAGGAGAAGTTTGCCTCAGTTTGACTGTCCTCTAGTGTTGGAAATCTTTGAGTCTCACTGTAACTCACAGGCTGTGTGATCGTGATGTGTTTAACAGCGCTCTGCACAGACAGCAGTGAAAGACACTGAAAGGATCTTTACTGAGCTCATTTGCTCCATTGAGAAAAGATGTTCTGAGCTCACACAGATTATCAGAGATCAAGAAAAGACTGCAGTGAGTCGAGCTGAAGGACACATGGAGTGGCTGGAGCAGGAGGTTGAAAATCTGAGAAGGAGAAACGCTGAGCTGGAGCAACTTTCACACAAAAAAGATCATGTCCAGTTTCTGAAGGTAACAAATCAGGAAGAAGCAAATCAGAATGAAGTTGAGCAAGTGATGCACAGATAAACAATTCAGTGGAAAATAATCAGCAGTTGTTTTCTTTCAGGATTTGTTTATTGTGTAAAGTGGAGGTGATGATTGTTGATTTGTGTTTTCTGCAGAGTTTCCAGTCTTTCTCAGCTCCTCCTGAATCTACAGATGTTTTATCCAGTTCTCTCTTGTGTTTCGATGGCCTGAGCGAATCTGTTTCTCAGTTGAAAGACAAACTGGAGGACTTTTGCAAAAAGGAGCTCAAGAAGATCTCAGACAGAGGTACAGTAAAGTCCCGGAGATTCATCTGCTCTCAGAAATGAGGTCTTTATCAACTCATATCGTGTAACATCATATTAGAAACATGCATGACACTTACACCAATACACCAATTATGTTTTTTGATTTTCCCAGTGACAAAAACTAGTCCCAAGACCAGGAACGACTTCCTACAATGTAAGTGACTAAATCCCAGCTTCAGATGTATGCTTTCAGCCATGATTTGGTCTCCTCAGACAAATTTAGGAAATTTTAGAAGATTTCTATAATCCTAGGGTAAAATCTGAAGACTTTGATCATTgatttgacatgttcacagatAGCAGATTAAAGGCCATTGCAAAAGAATTTTCCCTCCAATGAAATTCTGGCAGAGTCAGAAGTTTCAAATTTTTCCCAGCAGTTTAACTCTGCTAGAATCAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111935

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052069 True 1738 mRNA 0.42 2 49010987 49015203

Neighbor

gene id symbol gene type direction distance location
XLOC_026745 NA coding downstream 9694 48999903 ~ 49001293 (-)
XLOC_026744 BX769173.1 coding downstream 17407 48986671 ~ 48993580 (-)
XLOC_026743 BX769173.3 coding downstream 30668 48965923 ~ 48980319 (-)
XLOC_026742 ARHGAP44 coding downstream 294565 48638594 ~ 48716422 (-)
XLOC_026741 ndel1b coding downstream 398909 48584684 ~ 48612078 (-)
XLOC_026747 NA coding upstream 8697 49023900 ~ 49036782 (-)
XLOC_026748 BX784040.1 coding upstream 62559 49077762 ~ 49077879 (-)
XLOC_026749 trim35-12 coding upstream 88007 49103210 ~ 49110710 (-)
XLOC_026750 gipc1 coding upstream 110900 49126103 ~ 49138004 (-)
XLOC_026751 dnajb1a coding upstream 135619 49150822 ~ 49163683 (-)
XLOC_026739 NA non-coding downstream 537233 48461497 ~ 48473754 (-)
XLOC_026738 NA non-coding downstream 682854 48323540 ~ 48328133 (-)
XLOC_026736 NA non-coding downstream 1177873 47827202 ~ 47833114 (-)
XLOC_026732 NA non-coding downstream 1814027 47194738 ~ 47196960 (-)
XLOC_026752 NA non-coding upstream 171195 49186398 ~ 49372676 (-)
XLOC_026754 NA non-coding upstream 390955 49406158 ~ 49418345 (-)
XLOC_026761 NA non-coding upstream 919433 49934636 ~ 49937735 (-)

Expression


Co-expression Network