XLOC_026747


Basic Information

Item Value
gene id XLOC_026747
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49023900 ~ 49036782 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053120
CTGGAATGTCGTTCGAAGAGTCTCCTCTCTCCTGGCTTTTGTTGATTGTTTTGTGGAGTAGaaactgtgttgttttttttactcggCTAAATTGTTAAAAGTGATTGCTGAGCGTTGACTTTGAGATACTGTATACAGAGATACATGTGCTGAGGAgggtgcctttttgttttattactttttccTCATGTTTTGTGGTTAGTAGAGAGGTCACAGTTGCTCCAGTGTAGTCCAGAAATCCACCATGCTGCTTCTCAGTAAGACCACCGATGACTTTCAGCATCCCCTCCACACTTTCATTTGGTTCAAGTGTCGCctgatgaaaataaaaacaagtcaTCTTAAATGCAATTAACCCAAACAGTGTTAATGCCAAGGAATACTCAAGGAATCAACACTCACATCTTGTCCACCCAGATCAGTCTTCACCCATCCTGGATGAAGCGCCATGCAGAGGATCTCATCTGTCTTTACCTCCTCAGCAGCCAAAACAGTCAGCATGTTAAATCCTGCCTGAAAGATAAACACAGCATTTCAATTATACACATCAgctcaagctatcaaatctccaGGCGCCATCTAGTGCCAAAGCAGGACTTCAGTGTACCTTAGACACAGCATATGGCAAGGTTTGGAAGTGGCTGTATATGGGAGGCATTCTGGTCATGGAAGCCGCCACGGTGGAGATATTGATGATCGCTGCTTTTTTACTGGACATGCCTGGTGTCCCACTGGCTTTGGCTGCTATTTGTAGATATGGTCTGTACTCCtgaataaaagcatgaacaaataaatgacataTACTGGACGAGGATAGTATTACAAATTACAGAAATCGTTTACCCAAAAGATAAAATTCTTTTATTAATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053120 True 870 lncRNA 0.42 2 49023900 49036782

Neighbor

gene id symbol gene type direction distance location
XLOC_026746 BX769173.2 coding downstream 8697 49010987 ~ 49015203 (-)
XLOC_026745 NA coding downstream 22607 48999903 ~ 49001293 (-)
XLOC_026744 BX769173.1 coding downstream 30320 48986671 ~ 48993580 (-)
XLOC_026743 BX769173.3 coding downstream 43581 48965923 ~ 48980319 (-)
XLOC_026742 ARHGAP44 coding downstream 307478 48638594 ~ 48716422 (-)
XLOC_026748 BX784040.1 coding upstream 40980 49077762 ~ 49077879 (-)
XLOC_026749 trim35-12 coding upstream 66428 49103210 ~ 49110710 (-)
XLOC_026750 gipc1 coding upstream 89321 49126103 ~ 49138004 (-)
XLOC_026751 dnajb1a coding upstream 114040 49150822 ~ 49163683 (-)
XLOC_026752 NA coding upstream 149616 49186398 ~ 49372676 (-)
XLOC_026739 NA non-coding downstream 550146 48461497 ~ 48473754 (-)
XLOC_026738 NA non-coding downstream 695767 48323540 ~ 48328133 (-)
XLOC_026736 NA non-coding downstream 1190786 47827202 ~ 47833114 (-)
XLOC_026732 NA non-coding downstream 1826940 47194738 ~ 47196960 (-)
XLOC_026754 NA non-coding upstream 369376 49406158 ~ 49418345 (-)
XLOC_026761 NA non-coding upstream 897854 49934636 ~ 49937735 (-)
XLOC_026769 NA non-coding upstream 1301998 50338780 ~ 50341046 (-)

Expression


Co-expression Network