Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100379112 |
| gene name | LOC100379112 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 59364609 ~ 59365508 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| CCAAT/enhancer binding protein beta2 |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009617 | response to bacterium | biological_process |
| GO:0001878 | response to yeast | biological_process |
| GO:0044030 | regulation of DNA methylation | biological_process |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001172498.1 | True | 900 | mRNA | 0.52 | 1 | 59364609 | 59365508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532527 | LOC106567202 | coding | downstream | 48466 | 59303271 ~ 59316143 (-) |
| LOC110532526 | LOC106572477 | coding | downstream | 62964 | 59296405 ~ 59301645 (-) |
| LOC110532524 | LOC106572475 | coding | downstream | 72609 | 59263322 ~ 59292000 (-) |
| LOC110532525 | LOC106572474 | coding | downstream | 101729 | 59254233 ~ 59262880 (-) |
| LOC110532523 | LOC106572472 | coding | downstream | 113884 | 59232222 ~ 59250725 (-) |
| LOC118966081 | LOC106572483 | coding | upstream | 72303 | 59432552 ~ 59454098 (-) |
| LOC110533026 | LOC105022395 | coding | upstream | 136352 | 59501860 ~ 59503982 (-) |
| LOC110532539 | pym1a | coding | upstream | 202216 | 59567724 ~ 59581389 (-) |
| LOC110531224 | pan2 | coding | upstream | 270459 | 59635621 ~ 59689289 (-) |
| LOC110532543 | LOC106572491 | coding | upstream | 341032 | 59706540 ~ 59710691 (-) |
| G825351 | NA | non-coding | downstream | 61797 | 59302525 ~ 59302812 (-) |
| G825318 | NA | non-coding | downstream | 132896 | 59230635 ~ 59231713 (-) |
| G825328 | NA | non-coding | downstream | 137578 | 59226816 ~ 59227031 (-) |
| G825327 | NA | non-coding | downstream | 137856 | 59226242 ~ 59226753 (-) |
| LOC110532520 | LOC106572469 | non-coding | downstream | 157714 | 59191113 ~ 59206965 (-) |
| G825352 | ub2v1 | non-coding | upstream | 11529 | 59377037 ~ 59382410 (-) |
| G825383 | NA | non-coding | upstream | 18414 | 59383922 ~ 59384145 (-) |
| G825387 | NA | non-coding | upstream | 27224 | 59392732 ~ 59394382 (-) |
| G825420 | NA | non-coding | upstream | 94761 | 59460269 ~ 59460718 (-) |
| LOC118966080 | LOC106572502 | other | downstream | 141128 | 59222442 ~ 59224300 (-) |
| LOC110531218 | pqbp1 | other | downstream | 696524 | 58664782 ~ 58668085 (-) |
| G824405 | NA | other | downstream | 923751 | 58440470 ~ 58440858 (-) |
| LOC110532429 | NA | other | downstream | 3221181 | 56133004 ~ 56143428 (-) |
| G821851 | LOC106584099 | other | downstream | 3378092 | 55985960 ~ 55986517 (-) |
| G825961 | NA | other | upstream | 272838 | 59638346 ~ 59638894 (-) |
| LOC110532567 | LOC106572513 | other | upstream | 886093 | 60227530 ~ 60275772 (-) |
| G827668 | NA | other | upstream | 1662864 | 61028372 ~ 61072365 (-) |
| tmem269 | pss | other | upstream | 2322260 | 61683104 ~ 61717981 (-) |
| G829644 | NA | other | upstream | 3425080 | 62790588 ~ 62792496 (-) |
