LOC110532562 (LOC106572518)


Basic Information

Item Value
gene id LOC110532562
gene name LOC106572518
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 60025979 ~ 60030510 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616562.2
tgaagGGAGCCCACATTACGTAGCTAACTGCATCCACATCACAACAATCAGAAAATCCAGAGAAAAACAAGGAAGTGAACGGTCACGTAACTCTGAACTGTTATCTCCGTTTTTAGTATTAAAACGGTCCTGATATAAAAATACATACAACTTCAGAATCATCGTCTTCGACTCAGAAAACCACACACCAATTCAGGACAATGAACAACAAAGGTTCCTATCCCCAGCAAGCTGTGTACCCACAGCAGAGCAGTGCACCCATCTACCCCCCTGCTATGCAAGTGTCTCCTCAGGCACCCCCTTACACAGACGCACCACCTGCATACTCTGAGATTTATCAGCCCAGGTATGTGCACCCATCTCAGGCTGGCCAGCTACAGCAAATGGCCCAGTACCCTGGCACTCAGATGTACATGCAACTGCCCCAGTCCATGGCTGTTGGACCAATGGGCCACAACGTCCCCATGGCATACTACCCCATGGGAGCCATGTATCCCCCTGGCTCCACTGTGCTAGTGGAGGGAGGATATGATGCTGGTGCTCGATTTGGTCAAAGCAACAGTGCTTCCATCCCTCCCCCACCTCCTGGCCACATGCCTAATGCAGCTCAGCTGGCCGCCATGCAGGGTGCCAACGTCATGATGACACAGCGCAAGAACAACTTCTTCATGGGTGGTTCCAATGGTGGGTACACCATCTGGTAACAGCCAGCATTTGCCACAACTTCTCCCCATACTCCTCTCCCTCATTCAAAATGATGACTCCCTCTCCTGTCCCATCCGCCAACCCCTTTCGGGCTGCTTGGCCATGCCACAATACTGATATCACTTAACGGAATGTAATATTTTAGAGCCCCGATAAAAGGTACAGTACTCCACTTTCGATCCAGAGTCAGTCTTAATTACTTATTCATAATTTGGGCTTCTGAACCGGTTCCCTGACCTTACAAGGATAGTGCTGCTGTCTTCAGTCAAAACACATTTCATATGTTACTGGCTAGATTTTCTTTTTGAGTGAATGACATCGATCTAAACTCTTAACTGTCACCATTTTTGTACTTTATTACTTCAGTTTTTCATGTTTATTTGGACTCGGCCTCATGTCTTCCTCACAAAGAGTGCTAATGATCCAAGCAGTGCATCACATATACTTTAGTTTTTTTCTTTTTGCTGTTGCATGGCATGTTGAATATGCCCAGTAGGCCTATCTAAAAAATCAGTTTCTCCGCCCACCGGATTGTAGTATAATAGAATACTGGTATGTTAAACAAGAACCAAAACAAACAAGAATGGATTACAAAATTCTAACCAGACTATTTATTACATGCCATGGTGGTTTACTGTACCTTCTTGGGCAACTGTAGATGAACATAATCGGGTGCCAAACAGCACCGTGACTTAAataaaagcgaattaacttaaaatACTTAAGAACGAAATTCAGTGTGATTTTCCAAATTGAGATTTGGATCACCGAAAGGGTTGGTTGGCTTTACATTTTTGCAGTTATATGTTTTTCCCCCTAAGTCGGATACCCAGAGTTGGACATCATCCCAGTGTTTCGTTAAGTAAAATAATGGCACCCACAACCTGTTCTTAAAACACAAAGTACTGTCATGTAGGGTAGAATAACCTACTAAGATCAGTAGGTTTTAAGGGCTGCAGTGTTATGAAGCCTTTGCGGGTTAAATTAAAATATAACTAGTTTGTTTACTTTCTGTCTCATCTTCAAGTGATTTGTTTGAATCAATTACTAGTTACTTACTTTGTAAGTATAACCACGGAGATGGTTGTACCAAAGATATGGTCTAGATTGCACTACAAAATGTTTGattgacttaattataataattcAAATATGGCACATTTTAAAAGGAAACATATCAAACAGTGATGATGGGTTTGAAGGTACTTAAGACCTTCGATCTGGCATTTGTTGCTGTATTTTGTAAGGGGGTGATTAAATGTTTAATGTAATTGTGACTAGGTGGTTCTGCATGCCTTTTTGCACTTTTGCTCTGTACAACATTGAATTTTGTGAAGATGTATCATTGCTAATTTTTATAGAAATGCCACAATTTAATTTATGTACACTTCTGGAAATGATAGATTTTGCTACTTGTTTTTAGTTCAAATGCTAATAACCTGCAAATACAGCGCTAGGCAAAGGCTACTCTTTCCTGTACAACTTATTGAAGGAATTTCATTGAAGTGTCTTTTCACTCAGGGTGAGATTCCTAAATGTTTTAGGACTGCAGCAAATCACTTGCATATGGTTCCCCTTACCCGACTTGTTAATTGTAGTGTTAAGCCACACCATTATTTATGAATACGCATTGTCAGTCGAGCTTACACAACTGTTTCTTTTCCAATACACTTATGTGCGCTGCTAATTAAACTACCGTATAACCTTTTTAGGTCATATCTAACACTAGGTTTGATCCAGTTTGTGAAAACGCCTAGATTCAAGAATTTGATATTTTGGTTTAAACATTAACATTCAGTGCAATTTCTTTATTTTTCCATATGTAATGCAACTCATGTCTTGTATGTTATGATCAAAATTCATGTGTCACTGGGTATCCGACTTAATAGCCTAGATTTGATAGTTGTGGCCCTCCATTAAAACATGTAGTCCTCACTGAAATGTGAATTCCAGGTTACTTTGGTCAGTTGATCAGCTGTCTGGAAACCTGCTAGCCTAGCATGCAACCTGTTTGCACATTGTATCATCAGACTGCATCTGCTCTTGGTTACACTGATCATATGACTAGCTACCATTCCAAACATGGTTGTCATGTCACTCATTTTGCACAGCTGTAAATGTGTATCCCATTCCCAAACACACTGATGCATCATAGGGTTTAAAAAGGGGTCACAGCTTTCAAAATGTTAACAAAAAAGGCTCATACAATTTTGTTTAGTTTCTTTCTGTCCCAGACCTGACTCATGTTTATAACGCAGCTTAGACCTAGCAATATGATGTACCGTAATGCTTACCAGTAGATGCCATGCCAACCACAGCCAGTGTGGAGTAAAAGTTTCTGAAGGATTTATGGACATTTATAGTTCAGGGATTCTCTTTAACATTTTTATAATATGGATATGTATTAAAGTGATTTGATGGACTACAGTACTTTCTTTTAAGATTACTAAGTGTCACTTTGGTTTGAGACATGCGTCTGGAAGAACTCTGGTGCAGTTAACTTTTTATACTAAACAACATTTAAGGTGACAAATTTAGAATAAAGGATATTTTGGAAATTTGAAATGCTA

Function

NR:

description
DAZ-associated protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616562.2 True 3275 mRNA 0.40 4 60025979 60030510
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110532557 LOC106572522 coding downstream 37372 59978247 ~ 59988607 (-)
LOC110531227 LOC106572522 coding downstream 56893 59953127 ~ 59969086 (-)
LOC110532556 LOC106572524 coding downstream 74195 59933773 ~ 59951784 (-)
ankrd52a LOC106572525 coding downstream 102940 59902321 ~ 59923039 (-)
LOC110532551 LOC106572528 coding downstream 136484 59878159 ~ 59889495 (-)
LOC118966189 NA coding upstream 98751 60129261 ~ 60139187 (-)
LOC110532567 LOC106572513 coding upstream 197952 60227530 ~ 60275772 (-)
LOC110532573 NA coding upstream 1172702 61203212 ~ 61206086 (-)
LOC118966083 LOC106572544 coding upstream 1184043 61214553 ~ 61237917 (-)
LOC110532574 LOC106572544 coding upstream 1222184 61252694 ~ 61276113 (-)
G826167 NA non-coding downstream 13288 60012469 ~ 60012691 (-)
G826165 NA non-coding downstream 16226 60009190 ~ 60009753 (-)
G826156 NA non-coding downstream 27093 59998220 ~ 59998886 (-)
G826151 racgap1 non-coding downstream 33159 59992222 ~ 59992820 (-)
G826134 NA non-coding downstream 53824 59971771 ~ 59972155 (-)
G826174 NA non-coding upstream 357 60030867 ~ 60031085 (-)
G826187 NA non-coding upstream 17290 60047800 ~ 60048014 (-)
G826188 NA non-coding upstream 18354 60048864 ~ 60049093 (-)
G826152 LOC106572515 non-coding upstream 20203 60050713 ~ 60092582 (-)
G826200 NA non-coding upstream 45641 60076151 ~ 60077868 (-)
G825961 NA other downstream 387085 59638346 ~ 59638894 (-)
LOC118966080 LOC106572502 other downstream 802498 59222442 ~ 59224300 (-)
LOC110531218 pqbp1 other downstream 1357894 58664782 ~ 58668085 (-)
G824405 NA other downstream 1585121 58440470 ~ 58440858 (-)
LOC110532429 NA other downstream 3882551 56133004 ~ 56143428 (-)
G827668 NA other upstream 997862 61028372 ~ 61072365 (-)
tmem269 pss other upstream 1657258 61683104 ~ 61717981 (-)
G829644 NA other upstream 2760078 62790588 ~ 62792496 (-)
LOC110532632 LOC106572615 other upstream 3832338 63862848 ~ 63899379 (-)

Expression

LOC110532562(LOC106572518) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 125.
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LOC110532562(LOC106572518) Expression in each Bioproject

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LOC110532562(LOC106572518) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
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Co-expression Network