Item | Value |
---|---|
gene id | LOC118966083 |
gene name | LOC106572544 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 61214553 ~ 61237917 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
membrane cofactor protein-like isoform X4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036988566.1 | False | 3000 | mRNA | 0.41 | 13 | 61214553 | 61237886 |
XM_036988565.1 | False | 3151 | mRNA | 0.41 | 13 | 61214553 | 61237917 |
XM_036988567.1 | False | 3109 | mRNA | 0.41 | 12 | 61214553 | 61237917 |
XM_036988568.1 | False | 3100 | mRNA | 0.41 | 12 | 61214553 | 61237917 |
XM_036988569.1 | False | 3076 | mRNA | 0.41 | 12 | 61214553 | 61237917 |
XM_036988570.1 | False | 3034 | mRNA | 0.41 | 11 | 61214553 | 61237917 |
XM_036988571.1 | True | 3025 | mRNA | 0.41 | 11 | 61214553 | 61237917 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110532573 | NA | coding | downstream | 8467 | 61203212 ~ 61206086 (-) |
LOC110532567 | LOC106572513 | coding | downstream | 938781 | 60227530 ~ 60275772 (-) |
LOC118966189 | NA | coding | downstream | 1075366 | 60129261 ~ 60139187 (-) |
LOC110532562 | LOC106572518 | coding | downstream | 1184043 | 60025979 ~ 60030510 (-) |
LOC110532557 | LOC106572522 | coding | downstream | 1225946 | 59978247 ~ 59988607 (-) |
LOC110532574 | LOC106572544 | coding | upstream | 14777 | 61252694 ~ 61276113 (-) |
LOC110532575 | LOC106572544 | coding | upstream | 48451 | 61286368 ~ 61305985 (-) |
LOC110533028 | LOC106572573 | coding | upstream | 85641 | 61323558 ~ 61330431 (-) |
LOC110531230 | LOC106572547 | coding | upstream | 130340 | 61368257 ~ 61395923 (-) |
LOC110531231 | LOC106572548 | coding | upstream | 161838 | 61399755 ~ 61662054 (-) |
G827705 | LOC106572541 | non-coding | downstream | 61646 | 61148983 ~ 61152907 (-) |
G827709 | NA | non-coding | downstream | 119908 | 61093053 ~ 61094645 (-) |
G827702 | NA | non-coding | downstream | 125490 | 61088781 ~ 61089063 (-) |
G827695 | NA | non-coding | downstream | 133090 | 61080972 ~ 61081463 (-) |
G827692 | NA | non-coding | downstream | 136591 | 61077752 ~ 61077962 (-) |
G827779 | NA | non-coding | upstream | 94221 | 61332138 ~ 61347355 (-) |
G827785 | NA | non-coding | upstream | 119839 | 61357756 ~ 61361697 (-) |
G827771 | NA | non-coding | upstream | 124778 | 61362695 ~ 61366798 (-) |
G827788 | NA | non-coding | upstream | 138736 | 61376653 ~ 61378930 (-) |
G827819 | NA | non-coding | upstream | 212599 | 61450516 ~ 61450724 (-) |
G827668 | NA | other | downstream | 142188 | 61028372 ~ 61072365 (-) |
G825961 | NA | other | downstream | 1575659 | 59638346 ~ 59638894 (-) |
LOC118966080 | LOC106572502 | other | downstream | 1991072 | 59222442 ~ 59224300 (-) |
LOC110531218 | pqbp1 | other | downstream | 2546468 | 58664782 ~ 58668085 (-) |
tmem269 | pss | other | upstream | 449851 | 61683104 ~ 61717981 (-) |
G829644 | NA | other | upstream | 1552671 | 62790588 ~ 62792496 (-) |
LOC110532632 | LOC106572615 | other | upstream | 2624931 | 63862848 ~ 63899379 (-) |
G830543 | LOC108255233 | other | upstream | 2789990 | 64027907 ~ 64041211 (-) |
LOC110532670 | hoxc8ab | other | upstream | 3473755 | 64710256 ~ 64713744 (-) |