LOC118965938


Basic Information

Item Value
gene id LOC118965938
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 62386845 ~ 62391585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986963.1
atgaaactgCTCTCCAGCTTCATCCACACCAAGAGACTATGGCAGGTCGTCCATGCCAGGAGACTATGGCAGCTCATCCACGCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATAGCAGCTCGTCCACATTTGAAGACTATGACAGCTCGTCCACACTAGGAGACTATGGCAGCTTATCCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGAATATGGCAGCTCATCCACACCAGGAAACTATGGCAGCTCGCCCAGTCCAGGAGACTATAGCAGCTCGTCCATACCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGCCTATGGCAGCTCGTCCACTCCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGACTATGGCAGCTTGTCCACTCTAGAAGACTATGGCAGCTTGTCCACGCCAGGAGAATATGGCAGCTCATCCACTCTAGAAGACTATGGCAGCTCATCCACTCTAGAAGACTATGGCAGCTCGTCCACTCTAGAAGACTATGGCAGCTCGTCCACTCTAGAAGACTATGGCAGCTCGTCCACTCTAGAAGACTATAGCAGCTCGTCCACTCTAGAAGACTTTGACAACTCATCCACACCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGACTATAGCAGCTTGTCCACACCAGGAGACAATAGCAGTTCGTCCACACCAGGAGACTATGACAGCTCGTCCAAACCAGGAGACTATGGCAGCTCATCCAGGCCAGGAGACTATGGCAGCTCGTCCACACCAGGAGAATATAGCAGCTCATCCACTCTAGAAGATTATAGCAGCTCGTCCACTCTAGAAGACTTTGACAACTCATCCACACCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGACTTTGGCAGCTCATTCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGACTATAGCAGCTTGTCCACACCAGGAGACAATAGCAGTTCGTCCACACCAGGAGACTATGACAGCTCGTCCAAACCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATGGCAGCTCGCCCAGGCCAGGAGACTATGGCAGCTCGTCCATGCCAGGAGACTATGGCAGCTCGCCCAGGTCAGAAGACTATGGCAGCTCGTCCACACTAGGAGACTATGGCAGCTCGTCCATACCAGGAGACTATGACAGCTCATCCAGACCAGGAGACTATGGCAGCTCATCCACACCAGGAGACTATAGCAGCTCGCCCAGGCCATGA

Function

NR:

description
PREDICTED: uncharacterized protein PF11_0213-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986963.1 True 1356 mRNA 0.55 2 62386845 62391585

Neighbor

gene id symbol gene type direction distance location
LOC110532596 LOC106572563 coding upstream 4265 62359801 ~ 62382657 (+)
LOC110532591 LOC106572559 coding upstream 46061 62326990 ~ 62340784 (+)
LOC110532593 LOC106572560 coding upstream 63162 62225784 ~ 62323683 (+)
LOC110532589 cpsf3l coding upstream 180276 62196903 ~ 62206569 (+)
LOC110532588 LOC106572556 coding upstream 200586 62173452 ~ 62186259 (+)
klhl21 LOC106572566 coding downstream 187594 62579179 ~ 62606419 (+)
LOC110532601 NA coding downstream 224377 62615962 ~ 62619679 (+)
LOC110532602 NA coding downstream 233636 62623239 ~ 62627845 (+)
LOC110532604 LOC106572641 coding downstream 248215 62639800 ~ 62756902 (+)
LOC110532605 LOC106572639 coding downstream 370803 62762388 ~ 62789810 (+)
G828427 NA non-coding upstream 13406 62346508 ~ 62373439 (+)
G828449 NA non-coding upstream 128260 62253724 ~ 62258585 (+)
G828408 NA non-coding upstream 170833 62215611 ~ 62216012 (+)
G828254 NA non-coding upstream 241726 62141530 ~ 62145119 (+)
G828598 NA non-coding downstream 5206 62396791 ~ 62397015 (+)
G828832 NA non-coding downstream 179040 62570625 ~ 62570871 (+)
G828838 NA non-coding downstream 181594 62573179 ~ 62573993 (+)
G828868 NA non-coding downstream 209708 62601293 ~ 62604968 (+)
G828274 NA other upstream 196239 62189182 ~ 62190606 (+)
G827039 NA other upstream 1135607 61212461 ~ 61251238 (+)
G826751 NA other upstream 1724939 60661369 ~ 60661906 (+)
G826653 NA other upstream 1823448 60563080 ~ 60563397 (+)
G826505 NA other upstream 1940311 60446030 ~ 60446534 (+)
LOC110532619 LOC106572645 other downstream 1173993 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 1922493 64314078 ~ 64316656 (+)
G830923 NA other downstream 2274163 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 2488122 64879707 ~ 64883543 (+)

Expression


Co-expression Network