LOC110532607 (LOC106572638)


Basic Information

Item Value
gene id LOC110532607
gene name LOC106572638
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 62817177 ~ 62867560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616654.2
AAAAATGTTGGAACTCAAGATTATGTGGAATGCACGATTATTCCCAAACCATCAAGTAGGCCTACGAAGATTTTTGTGAACAATGCCATCATTATCTTGGATTACTTATCATAGCGTCTACAGACAATTTATATGTAGGTTTAGTAAGCAGCGGCTTCTTTATTTGAGAGTCGTTTGTGCTTGCATTTAGAACACACCTTTGGAAGTGTAATTCGCTCCGCACATTTGCTACACTTGtgtcagcagtgggatgcaggtgACGGTGAGGCCAGGCCATCGTAGGTGCTGTTAGGACACCACCGCCCAGTTGAGTTGATTTAACATTTCGTGGAATCTGGATTATTGGTGATTTCCAACATTGAACTCTTCTATAATGGTCAGGAGGTAGCCTACCATTGCTGACTGCCAGAGGTGCGAGATCGTGCGTGTCCCCCCTTGTGCAGGAAATCCCCCGCCACTGAGTCGGAGTGAGGGAGCCGCTTTCCATGGAGGTTTCACTGAGCAACGAGATGCAGCTGAGCATCATGATGAAAGTGAAGAGTGGGGAGCTGACCATCGATGACGCCCTGAACCAGGCCAGGAGGAGCAATCAGGAGGAGTTAAAACAAAGCCTGGCCACAGAGGAACAGCAAGCCTCCCAGTACAACTTCAGTGTTTACAAGTACAACCGCTACAGGTGGCAGAAGCGCATTCTTCAGATTGACTTCAACACTAAAATGGTGTGCAGCATAGAGAAAGGCATCGTAAAGCGGCAGCTGCCGTTCCTGTGTGTTAAGAGCTGTGATGACGGAGTTGGGACCAAGTTCTCTATATCTTTCAGAGGAAGACATGACTATGAGCTGGAGGCCACCTCACTGGAGGACAAACACCAGATAATGCAACTTGTAAACAAGATAATCTACAGAAACATCTACAGACATCCAGTGGAGGGCAGTGAAGACACGTGTGTGCATCCCCTGCTTCTAGCACCAAAGAGCCTCAGGGAGGGCCTGCTGTTCCTGCAGAGAGGTGGATTGGCATCGTTTAAATGGGTGAAGTACGAGGCTCACCTTCACCCTGGCAAGCTGACCCTGCTCCCCATCAGCCGGCGGGGGGTAGGTGCAGATGGGGACATGGTCACCTCGTCATCCTTGCCAGTTGTCATTCATTTCTCAGACGGGGAAGCGAGTGTAGAGAAACCACGCAGCTGTGACACCTTCACTCTTTTGACTCACAAGAATGAGTACCAGTTCCAGGTACCTGTGATAGAACTTTCCAAAAGCACAGAAGCCATCCAGAAGGAGAGGGATGCTTGGGTCCAGGCCATAGATGAGCTATGCCTGAACTGGAAACGCACGTCTCAGACTGAGCACTTCTATGAGGAAACCAGGGCTTTAAGAATCTATGACAATGTCAAACACATTCTGGAGGAGAACAAGTCCACTGACGGACAAGGCCTCCGAGGAACAGATCTTGTCTCCAGTGCAGATAATCTATCGGCTGGAGAAAAGATTGAGAGTAAACCTCCAACCTCGCCTCTCCCAAAACCCTGCAGCCCTGTGAAGTTACTAGTGAATGTCCCCTTCCCTGGTCCTGTCCTTTCCCCTGCACCTGCCCCTGATTCTGTGCCTGGTCTTGCACTTGTTCCTGGTTTTGTCCTtgatcctgtccctgtccccgcCACTGTCCCTGTACCCATTCCCTCAATGGTGCCAGCTCCCCCCTTCATTCCTATGCCTCCTCCATTGCCCTTTAAGCCCAGTAGAAAACCCCTAACAGTGCGGACCAGGGCCTTCCACTGGGATGAGGTTGGTTCTGATAAGATAGAGAAATCATGCTGGACACGGGGAAACGCTGGGAACATTGAAATTGACACTTCACGCTTGTATGAGCAATTTGCAGTTCAAGATTTGGGAACATTTGGCGGGATCACCGAGCCCAGCATTAACCTTCACATCATGCTCAATACGAAGGTTGCTCACAACTTTAATATTTTCCTCAAAAGTTTCCATGTGCAGCCAGGAGAACTAAAGGACAAACTGTTCTTGGTTAATGAGGGTGAGGGAGGCTTCTCTGACGAACAGATCACTTCCCTGAGGAGATTTGTACCTACCTCAGACGATGTGGAAATGTATAACTCTTACAAGGGGTCTGTGTCAGAGCTGCATGTTGTGGACCAGTACATGATGGAGATGTGCAACATTCCTTACCTGAACTCCAGACTGGACCTGCTGCTGACTCTAAGAGAGCTGCCCATAAGCATGGAGGATCTGCAGCCGCTGATTAACCAGAAGATCAGGATGTGCACGCAGTTGTACAGCTCCAGGTCGTTTGTCTCCGTGCTGAAGTACCTGCTGGCCATCGGCAATTACCTCAATGAGAACGCAGGGAAGGGAAAGGCCAAGGGATTCCGCCTCTCCTCCTTAACTAAAATCTCCCAGCTCCGTGGGATAGACAGGAAGTTCACCTTGCTGCATGCCCTTGTGGAGCAGATCATGTTGCACGAACCCGGCTTGGCCACTTTTCCACAAGAGTTGACGGAATTCGAAACTGTCCCTGGGGCTTCCATTAAAGGCCTTACTGCTGAAGTGGACGTTCTCAAGAATGAGTTACAGAAGACCATTCAGTACAAGAAAACGTACAAGAGAAGAAACCAAGGCGATCAACACCCAAAGTTTTTCAAAGACCTGAAGATGGCGATTGAGAAGTACAAAACCGATCTCTCCCTGCTGACAAAGAGGTCTGAGGAGATGAAGAAACTCTACACTGACATATTGGTTAAATTCGGAGAGCCAATGGATCAAGATTCTCAGGAGCTGTTTGGCTTGGTGTGCCAGTTTGTCAACGACTTCAAGGGGACACATGCTGAAATCAGATAACAATTTGCTGTCCTTGTGTGACTATCTATAAATCTTCAGCCA
>XM_021616653.2
GCAGGAGCAAGTCACAACATGAACTGACTCAAGAACTGACACACCATTTGTTGAGTGTTGTAGAAACTATAGAGACCAGAGAGATGCGAAATCTGATAGGTGGGTGGGGTAATAGAGACCGGTAAATCCcttttcttctcctttcctcttagATGGATTTTAAAGGAAGTGTTACTGTAAATTAGGTGAAAAACTCCATGCATTCTAGACAGGAAAGTTTTGCTGAGATTTTCTTTTGAAACCCGTACATTATGTTGCCACGGGCAGGGCCCAGGAACGAAAACCCCTCGTTGATGGACAGAAAAGGTTCAGTAGCCGTGCCACAGCTGAGCAACGAGATGCAGCTGAGCATCATGATGAAAGTGAAGAGTGGGGAGCTGACCATCGATGACGCCCTGAACCAGGCCAGGAGGAGCAATCAGGAGGAGTTAAAACAAAGCCTGGCCACAGAGGAACAGCAAGCCTCCCAGTACAACTTCAGTGTTTACAAGTACAACCGCTACAGGTGGCAGAAGCGCATTCTTCAGATTGACTTCAACACTAAAATGGTGTGCAGCATAGAGAAAGGCATCGTAAAGCGGCAGCTGCCGTTCCTGTGTGTTAAGAGCTGTGATGACGGAGTTGGGACCAAGTTCTCTATATCTTTCAGAGGAAGACATGACTATGAGCTGGAGGCCACCTCACTGGAGGACAAACACCAGATAATGCAACTTGTAAACAAGATAATCTACAGAAACATCTACAGACATCCAGTGGAGGGCAGTGAAGACACGTGTGTGCATCCCCTGCTTCTAGCACCAAAGAGCCTCAGGGAGGGCCTGCTGTTCCTGCAGAGAGGTGGATTGGCATCGTTTAAATGGGTGAAGTACGAGGCTCACCTTCACCCTGGCAAGCTGACCCTGCTCCCCATCAGCCGGCGGGGGGTAGGTGCAGATGGGGACATGGTCACCTCGTCATCCTTGCCAGTTGTCATTCATTTCTCAGACGGGGAAGCGAGTGTAGAGAAACCACGCAGCTGTGACACCTTCACTCTTTTGACTCACAAGAATGAGTACCAGTTCCAGGTACCTGTGATAGAACTTTCCAAAAGCACAGAAGCCATCCAGAAGGAGAGGGATGCTTGGGTCCAGGCCATAGATGAGCTATGCCTGAACTGGAAACGCACGTCTCAGACTGAGCACTTCTATGAGGAAACCAGGGCTTTAAGAATCTATGACAATGTCAAACACATTCTGGAGGAGAACAAGTCCACTGACGGACAAGGCCTCCGAGGAACAGATCTTGTCTCCAGTGCAGATAATCTATCGGCTGGAGAAAAGATTGAGAGTAAACCTCCAACCTCGCCTCTCCCAAAACCCTGCAGCCCTGTGAAGTTACTAGTGAATGTCCCCTTCCCTGGTCCTGTCCTTTCCCCTGCACCTGCCCCTGATTCTGTGCCTGGTCTTGCACTTGTTCCTGGTTTTGTCCTtgatcctgtccctgtccccgcCACTGTCCCTGTACCCATTCCCTCAATGGTGCCAGCTCCCCCCTTCATTCCTATGCCTCCTCCATTGCCCTTTAAGCCCAGTAGAAAACCCCTAACAGTGCGGACCAGGGCCTTCCACTGGGATGAGGTTGGTTCTGATAAGATAGAGAAATCATGCTGGACACGGGGAAACGCTGGGAACATTGAAATTGACACTTCACGCTTGTATGAGCAATTTGCAGTTCAAGATTTGGGAACATTTGGCGGGATCACCGAGCCCAGCATTAACCTTCACATCATGCTCAATACGAAGGTTGCTCACAACTTTAATATTTTCCTCAAAAGTTTCCATGTGCAGCCAGGAGAACTAAAGGACAAACTGTTCTTGGTTAATGAGGGTGAGGGAGGCTTCTCTGACGAACAGATCACTTCCCTGAGGAGATTTGTACCTACCTCAGACGATGTGGAAATGTATAACTCTTACAAGGGGTCTGTGTCAGAGCTGCATGTTGTGGACCAGTACATGATGGAGATGTGCAACATTCCTTACCTGAACTCCAGACTGGACCTGCTGCTGACTCTAAGAGAGCTGCCCATAAGCATGGAGGATCTGCAGCCGCTGATTAACCAGAAGATCAGGATGTGCACGCAGTTGTACAGCTCCAGGTCGTTTGTCTCCGTGCTGAAGTACCTGCTGGCCATCGGCAATTACCTCAATGAGAACGCAGGGAAGGGAAAGGCCAAGGGATTCCGCCTCTCCTCCTTAACTAAAATCTCCCAGCTCCGTGGGATAGACAGGAAGTTCACCTTGCTGCATGCCCTTGTGGAGCAGATCATGTTGCACGAACCCGGCTTGGCCACTTTTCCACAAGAGTTGACGGAATTCGAAACTGTCCCTGGGGCTTCCATTAAAGGCCTTACTGCTGAAGTGGACGTTCTCAAGAATGAGTTACAGAAGACCATTCAGTACAAGAAAACGTACAAGAGAAGAAACCAAGGCGATCAACACCCAAAGTTTTTCAAAGACCTGAAGATGGCGATTGAGAAGTACAAAACCGATCTCTCCCTGCTGACAAAGAGGTCTGAGGAGATGAAGAAACTCTACACTGACATATTGGTTAAATTCGGAGAGCCAATGGATCAAGATTCTCAGGAGCTGTTTGGCTTGGTGTGCCAGTTTGTCAACGACTTCAAGGGGACACATGCTGAAATCAGATAACAATTTGCTGTCCTTGTGTGACTATCTATAAATCTTCAGCCAATCCAAACACAATTCAGTGCTGCATACTTTGTAATTATGCACATACAAATACACGTTTATTTACTTCAAATTGTAAAGAGGCCGAGACTTCTTAGAAATTGCACTGATCAGTGACATATAACATTAATGGCAACCTAGAAACCTTTAAGCGTCTTTGGGTCTTTGAAAAGCGCTATATAAATCACATtactattaatattattattgttatttgtgTGCACTAAGATGCCACACAAGCTGTGGTTTAATACTATGTTCAGGCAGCTAGACTTGGGGATTGCAATTTCAGTGGGAAAATATTAGAGTGTATAATGCTTTGCTGTAATTAATAGGAATCTATATGGGATATATAacaggtactgtatattgttTGAAGACAGTAGACTGATAGTTGGTCGGAATTCATTGTGACAAATTGTCTGAAATCGATtgaaaaaatgtattgaattgaaGTTATGAGACAGGAGGAAAGCCTactggtttgaatggtgtcagcaatGTTGAGCGTGTATTATTTTGAACTTAAAAACATGAATTGGGATATTTagtgtactatatactgtaggcagAGAACATTTAACAGAACAAGGCTAACTTAACTTAATTTGGACAAAAATTCTGATAGAAActtatagtcccaagctctctACTTTCTGtccacagctgtctgtctgatgACAAGGGAACCGAAtcacaaagaacacacacacagtggcctcGCCAGCTGAAAATGGTCCATCTGATTACCCATTTTTCTCTGAACGTGCAGACATTCTTGCCTTGGTCGGGGACACACAGATTTTCTATTCCAGTACTCCAGTCAGGGATCCAGGACCCTTCTCTGATTCTGGACAGCATCTGGTGCTTTTTGCCATCTGAAATTGATATTTTTTCCCATTGTCCTTCCCTCACTTGCAATTGGTAACGCAGCAGCAAAATGGGTGCTGTTAGCAATTGCTTGAAAATACTTTATATTGatttgatgagagagagagagtgattgatTAATTGAAAATGTACAGAAAATATTTGATTAAATGTAGCTTTCATTCAGAAGATGACTTACTTTTATGATATTACATATTTACCAAGTCtgggatattttttttctcatttctgaaacaaatttgatctgatttgattATATTACTTAGCCATGTCAAGTGTGAAACTTCAAAGCAGGTTGTTTTTGTGTAAACccccgtttatacctggtgcctttgtcctgatcttgtcgaTATTCTGATTTAAGCCCACATTTCAAGAAATGTGTCTACAcatggtattaaaatgtgtctgTTATCTGTCCACTGTGTCCACATTGTGGCCATATTTCCTGGTCCCTTCCTTTATGCAAATTATTTCACAgctattctttcaaaataatgtttattaattgTAAGACACTTATATTGATGTAATAAGCCAATGGTgccacctgtcaatgattttagagggCAAAATATTTATGATTTAGATGATTTCTCGGTCCAGATCTTGTAAGATATACAGACACAATGCGTGCCTGAATACCTCCGGAGGTGGTCAGGAAAatctgatcacaatcagatcGCAATGTGTCTTTTAATCATCTACACTTGATCAGGACAATGGATGCAAGTTAtaaccaggtataaacaggggtTCTGATAGAATATGTATATGACACCTTTACTCCCACAACCACTCCATGTTATAAATGGCTATAGTAGGTGTttaacctacagttgaagtcagaagtttacatccaccttagctaaatacatttaaactcagatttt

Function

NR:

description
protein diaphanous homolog 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616654.2 False 2900 mRNA 0.49 17 62817177 62865779
XM_021616653.2 True 4510 mRNA 0.44 17 62820946 62867560

Neighbor

gene id symbol gene type direction distance location
LOC110532606 LOC106572647 coding upstream 11059 62804198 ~ 62806118 (+)
LOC110532605 LOC106572639 coding upstream 27367 62762388 ~ 62789810 (+)
LOC110532604 LOC106572641 coding upstream 60275 62639800 ~ 62756902 (+)
LOC110532602 NA coding upstream 189332 62623239 ~ 62627845 (+)
LOC110532601 NA coding upstream 197498 62615962 ~ 62619679 (+)
LOC110532609 LOC106572637 coding downstream 30153 62897713 ~ 62904419 (+)
LOC110532611 LOC106572634 coding downstream 144808 63012368 ~ 63026673 (+)
LOC110532612 LOC106572633 coding downstream 165914 63033474 ~ 63045519 (+)
LOC110532614 LOC106572631 coding downstream 492022 63359582 ~ 63363557 (+)
sall4 LOC106572630 coding downstream 534851 63402411 ~ 63410632 (+)
G828868 NA non-coding upstream 212209 62601293 ~ 62604968 (+)
klhl21 LOC106572566 non-coding upstream 219446 62579179 ~ 62606419 (+)
G828838 NA non-coding upstream 243184 62573179 ~ 62573993 (+)
G828832 NA non-coding upstream 246306 62570625 ~ 62570871 (+)
G828598 NA non-coding upstream 420162 62396791 ~ 62397015 (+)
G829013 NA non-coding downstream 12991 62880551 ~ 62881096 (+)
G829074 NA non-coding downstream 105479 62973039 ~ 62973534 (+)
G829082 NA non-coding downstream 113771 62981331 ~ 62981728 (+)
G829085 NA non-coding downstream 117453 62985013 ~ 62985236 (+)
G829118 NA non-coding downstream 183612 63051172 ~ 63116057 (+)
G828274 NA other upstream 626571 62189182 ~ 62190606 (+)
G827039 NA other upstream 1565939 61212461 ~ 61251238 (+)
G826751 NA other upstream 2155271 60661369 ~ 60661906 (+)
G826653 NA other upstream 2253780 60563080 ~ 60563397 (+)
LOC110532619 LOC106572645 other downstream 698018 63565578 ~ 63601970 (+)
G830755 gp182 other downstream 1446518 64314078 ~ 64316656 (+)
G830923 NA other downstream 1798188 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 2012147 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 2498731 65186569 ~ 65405501 (+)

Expression


Co-expression Network