LOC110532619 (LOC106572645)


Basic Information

Item Value
gene id LOC110532619
gene name LOC106572645
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 63565578 ~ 63601970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616676.2
AGAGCAGAGTTGTCGTGCGATGCAGAAGCAACAGCAACAGTTAGGACTTCATGTTTTCTTCTCTTATTGATCACTTTGAGAGCCGCTGGCTTTTTTGTATCAACTAAAACTCACAACTGTTGGAAGAACTGATGCACAACCACAGTAAAGGTGTGTCCGTGAGAGGTTGACCACAGGAATGTGAGCTGCGGTGGGAGTGCACATGGAGGTTCTGTGCCTGTATAGGTAAAGATGACTCTGCTGGCAGGCGACGGCTCAGACTATGACTACAGTGCTCTGAGCTGTGCCTCCGatgcctccctcctccttcctcaacCCCCGCCCCTGTCAGAGCAAGAGGCCCTCAAGGGGGCCTACTACAAACGGGCCCAACTTCTACCTGAGGACCCAGACCACCTCCTCACCAACTCCTCGCTCTCCGCTGCCCGTAAACTCCATGCCATTATCAATGTTGGCGGGCTGCGTTATCAATTACCCTGGACCACCTTGGAGGACTTCCCCCTGTCCCGACTTGGCCAGCTGCGCCTCTGCAGCAGCTTTGACGAGATCATGTGCGTCTGCGACGATTATGACATTGCCAGCAACGAGTACTTCTTCGATCGTTCGCCCTGTGCCTTCCGCACCATCCTGACCTTCCTGCGGGCCGGGAAGCTGCGATCCCTCAGGGAGATGTGTGCCCTCTCCTTCAGGGAGGAGCTGCTCTACtggggggtccctgaggagaacCTAGAATGGTGCTGCCGCCGCCGCCTCATCCAGCGGGTGGAGGAGTGTGACGAGCTGGAGCGGGCAGcccaggaggacgaggaggaggagctgaTGATGGACACCGAAAGCGGGCACCGCAGAGGCAGCGCCGCCCGGGCTACGGAGACCCGGATGGGACATTATATGAACAAgctgagagacatggtggagaggCCTCACTCAGGCCTGCCAGGGAAGATCTTTGCCTGTTTGTCGGTGCTGTTTGTCACCATCACGGCTGTCAACCTGTCCATCAGCACCATGCCGgccatgagagaggaggaggagcagGGCAAGTGCTCCCAGATGTGCTACAACATCTTCATAGTGGAGACGGTGTGTGTGGGCTGGTTCTCCCTTGAGTTCACCCTGCGCTTCATCCAGGACCGGGACAAACTTGCCTTCCTGAGACGACCTCTGAACCTCATAGACGTGGTGGCAATCCTGCCCTACTACATCACCCTAGTAGTGGACAGCTACCAGGGGGAGAAGAAGCTGGGATCGGGCAGCAGTTACCTTGACAAGGTGGGTCTGGTGCTCCGGATCCTCCGTGCCCTGAGGATTCTGTACGTGATGCGACTGGCCCGCCATTCATTGGGCCTGCAGACTCTGGGGCTTACTGCACGGCGCTGCACGCGGGAGTTCGGattactcctcctcttcctctgcgtGGCCATTGCCCTCTTCTCCCCGCTGCTCTACCTCATTGAGAACGAGATGGCTACGACCCACGAGTTCAGCAGTATCCCCGCCACCTACTGGTGGGCCGTCATTACCATGACGACAGTGGGCTACGGGGACATGGTTCCGAGGAGCATCCCGGGTCAGGTGGTGGCTCTGAGCAGTATCCTGAGCGGGATTCTTCTCATGGCGTTCCCAGTCACCTCCATCTTCCATACATTCTCTCGGTCCTATGTGGAGCTGAAGCAGGAGCAGCAGAGGCTACTGCAAAGACGGACACACTTCCTGTTACGCAGGAGGATAGGCGGGCTGGGGAGTAACATGTCGCTGGAGAGTGACTACCCCAGCTGTGGTTCCTCTGGGGCCAGGGACAACTGagtaggaggaggtggaggaggagggatgattAAAGGGCACAGCACACaaagaaaatgagagaaaaaagggGTTAGAACTTGGCAACTTCATCTGTGAACAGGGAACCAAATGACTGAGGAGAATGAGAGAAGACGCAAAGCACAGACTATAGACAAAGAgactatagacagagagacaaactgagaGTGATGAAATAGGGGTTAAGTAAGATTACCTGGCAATGCTCTGCTTCCATTTTATGAGTTTATTATTCTTCAATGGATGACGTCATCTCTGCCTACAGCATTATGATTTAACAGATGCGGGAAATGTTCCCAGAAATCAGAAGATCTGCACAATAGCAGAAAGAAGATTATAATAAACCATTTTAGATGATTGACATAACTGTACATCATATTCCATAAAGTAATTTATCAAAAATAACATGGACGTACAGTATAGGCTACATGTAATATGTGATCGATTTCTTATTCATTTTTGTGTCTCAATTGTAAAGTGTGAGTCCATAACCATATTTCTTAAGAGTTACTTGTATTGGAGGTGTATTGGTGCTCAGCACTGGGTTGCAATTTTCTGTATAAAACAATGAAGGAATGTGTATCTGTACGTAGTTATTATGTGCTCCGTCTCTCACAAATGTATTTCTAAAACCTAGTAATTTGTGTGTAAAAAAAATGGTAcgtttgttttattttttgctATTGATTGCTAAATGTTTTGAGCTTATTTTTCTCTTTAAAGTTTAACTGAACTTAGTCTGATCTGCCTCATGATTGCTTGGACTTATTTGTAATTTACTGACTTTTCTGCTATTTCCTAACCATTTATATGTCTATTTTCAAAACACagcaaattaaatcaaatcaaatctaatttgtcacatgcgcttaatacaacagctgtagactttaccatgaaatgcttacctacgagCCCTTTAAGAACAATGCATTATTAAAAATTAAGAAACATTTTCTTAATGAAAAaagaaaatagtaacacaataaaataacaataacgaggctatataaaaGGAGTACTGGGTCAATGTTCAGGGGGTATGAGGTCGTTGAGGAAATTGAGATCATATGTACGTGTAGGTAACAGTTAAAGTGTCTAGGCAATCAGAATAGATAATAATaggtagcagcagcgtatatgtAGAGGGTgaaagtgtgtctatgtgtgtgtatgtgtatgtgtgtgttggtgtgtcagtGTAGCATGTGTTAGTGTGTCGGTAGGGTCCAGTGAGTATGCATAGAGCCTGTGCAAGAGAGGCAGTGCAAAACAAAGGGAATCAATGCAAATACACCGGGTAGCCACTTGATTAAATGTTCAGAAGTCgcatggcttgagggtagaagctgttcaggagccattTGGTCCCAGACTTTGCGttctggtaccgcttgcagtgtggtagcagacagaacagtccatgactttgGTAGCTGGAGTATTTGGCaatttttttgggccttcctctgacaccgcctggtatagaggtcctggatggcagggagcttggccccagtgatgaact
>XM_036988638.1
aatgcaAGTGTCAAGAAATGTTTACATTCTAAAAAGCCATATTTCCCTCAAGAACCACAGGTTCTAACAAGGTTCTAACATCCTTTTAAGAGTATTTTTAAGAGTGTATAGTACATGATTTTTTATGTTTGTCCTTTCCCTCCTGAAGGTAAAGGTGTGTCCGTGAGAGGTTGACCACAGGAATGTGAGCTGCGGTGGGAGTGCACATGGAGGTTCTGTGCCTGTATAGGTAAAGATGACTCTGCTGGCAGGCGACGGCTCAGACTATGACTACAGTGCTCTGAGCTGTGCCTCCGatgcctccctcctccttcctcaacCCCCGCCCCTGTCAGAGCAAGAGGCCCTCAAGGGGGCCTACTACAAACGGGCCCAACTTCTACCTGAGGACCCAGACCACCTCCTCACCAACTCCTCGCTCTCCGCTGCCCGTAAACTCCATGCCATTATCAATGTTGGCGGGCTGCGTTATCAATTACCCTGGACCACCTTGGAGGACTTCCCCCTGTCCCGACTTGGCCAGCTGCGCCTCTGCAGCAGCTTTGACGAGATCATGTGCGTCTGCGACGATTATGACATTGCCAGCAACGAGTACTTCTTCGATCGTTCGCCCTGTGCCTTCCGCACCATCCTGACCTTCCTGCGGGCCGGGAAGCTGCGATCCCTCAGGGAGATGTGTGCCCTCTCCTTCAGGGAGGAGCTGCTCTACtggggggtccctgaggagaacCTAGAATGGTGCTGCCGCCGCCGCCTCATCCAGCGGGTGGAGGAGTGTGACGAGCTGGAGCGGGCAGcccaggaggacgaggaggaggagctgaTGATGGACACCGAAAGCGGGCACCGCAGAGGCAGCGCCGCCCGGGCTACGGAGACCCGGATGGGACATTATATGAACAAgctgagagacatggtggagaggCCTCACTCAGGCCTGCCAGGGAAGATCTTTGCCTGTTTGTCGGTGCTGTTTGTCACCATCACGGCTGTCAACCTGTCCATCAGCACCATGCCGgccatgagagaggaggaggagcagGGCAAGTGCTCCCAGATGTGCTACAACATCTTCATAGTGGAGACGGTGTGTGTGGGCTGGTTCTCCCTTGAGTTCACCCTGCGCTTCATCCAGGACCGGGACAAACTTGCCTTCCTGAGACGACCTCTGAACCTCATAGACGTGGTGGCAATCCTGCCCTACTACATCACCCTAGTAGTGGACAGCTACCAGGGGGAGAAGAAGCTGGGATCGGGCAGCAGTTACCTTGACAAGGTGGGTCTGGTGCTCCGGATCCTCCGTGCCCTGAGGATTCTGTACGTGATGCGACTGGCCCGCCATTCATTGGGCCTGCAGACTCTGGGGCTTACTGCACGGCGCTGCACGCGGGAGTTCGGattactcctcctcttcctctgcgtGGCCATTGCCCTCTTCTCCCCGCTGCTCTACCTCATTGAGAACGAGATGGCTACGACCCACGAGTTCAGCAGTATCCCCGCCACCTACTGGTGGGCCGTCATTACCATGACGACAGTGGGCTACGGGGACATGGTTCCGAGGAGCATCCCGGGTCAGGTGGTGGCTCTGAGCAGTATCCTGAGCGGGATTCTTCTCATGGCGTTCCCAGTCACCTCCATCTTCCATACATTCTCTCGGTCCTATGTGGAGCTGAAGCAGGAGCAGCAGAGGCTACTGCAAAGACGGACACACTTCCTGTTACGCAGGAGGATAGGCGGGCTGGGGAGTAACATGTCGCTGGAGAGTGACTACCCCAGCTGTGGTTCCTCTGGGGCCAGGGACAACTGagtaggaggaggtggaggaggagggatgattAAAGGGCACAGCACACaaagaaaatgagagaaaaaagggGTTAGAACTTGGCAACTTCATCTGTGAACAGGGAACCAAATGACTGAGGAGAATGAGAGAAGACGCAAAGCACAGACTATAGACAAAGAgactatagacagagagacaaactgagaGTGATGAAATAGGGGTTAAGTAAGATTACCTGGCAATGCTCTGCTTCCATTTTATGAGTTTATTATTCTTCAATGGATGACGTCATCTCTGCCTACAGCATTATGATTTAACAGATGCGGGAAATGTTCCCAGAAATCAGAAGATCTGCACAATAGCAGAAAGAAGATTATAATAAACCATTTTAGATGATTGACATAACTGTACATCATATTCCATAAAGTAATTTATCAAAAATAACATGGACGTACAGTATAGGCTACATGTAATATGTGATCGATTTCTTATTCATTTTTGTGTCTCAATTGTAAAGTGTGAGTCCATAACCATATTTCTTAAGAGTTACTTGTATTGGAGGTGTATTGGTGCTCAGCACTGGGTTGCAATTTTCTGTATAAAACAATGAAGGAATGTGTATCTGTACGTAGTTATTATGTGCTCCGTCTCTCACAAATGTATTTCTAAAACCTAGTAATTTGTGTGTAAAAAAAATGGTAcgtttgttttattttttgctATTGATTGCTAAATGTTTTGAGCTTATTTTTCTCTTTAAAGTTTAACTGAACTTAGTCTGATCTGCCTCATGATTGCTTGGACTTATTTGTAATTTACTGACTTTTCTGCTATTTCCTAACCATTTATATGTCTATTTTCAAAACACagcaaattaaatcaaatcaaatctaatttgtcacatgcgcttaatacaacagctgtagactttaccatgaaatgcttacctacgagCCCTTTAAGAACAATGCATTATTAAAAATTAAGAAACATTTTCTTAATGAAAAaagaaaatagtaacacaataaaataacaataacgaggctatataaaaGGAGTACTGGGTCAATGTTCAGGGGGTATGAGGTCGTTGAGGAAATTGAGATCATATGTACGTGTAGGTAACAGTTAAAGTGTCTAGGCAATCAGAATAGATAATAATaggtagcagcagcgtatatgtAGAGGGTgaaagtgtgtctatgtgtgtgtatgtgtatgtgtgtgttggtgtgtcagtGTAGCATGTGTTAGTGTGTCGGTAGGGTCCAGTGAGTATGCATAGAGCCTGTGCAAGAGAGGCAGTGCAAAACAAAGGGAATCAATGCAAATACACCGGGTAGCCACTTGATTAAATGTTCAGAAGTCgcatggcttgagggtagaagctgttcaggagccattTGGTCCCAGACTTTGCGttctggtaccgcttgcagtgtggtagcagacagaacagtccatgactttgGTAGCTGGAGTATTTGGCaatttttttgggccttcctctgacaccgcctggtatagaggtcctggatggcagggagcttggccccagtgatgaact
>TU943081
TGTGCAGAGAGAGCAGAGTTGTCGTGCGATGCAGAAGCAACAGCAACAGTTAGGACTTCATGTTTTCTTCTCTTATTGATCACTTTGAGAGCCGCTGGCTTTTTTGTATCAACTAAAACTCACAACTGTTGGAAGAACTGATGCACAACCACAGTAAAGGTGTGTCCGTGAGAGGTTGACCACAGGAATGTGAGCTGCGGTGGGAGTGCACATGGAGGTTCTGTGCCTGTATAGGTAAAGATGACTCTGCTGGCAGGCGACGGCTCAGACTATGACTACAGTGCTCTGAGCTGTGCCTCCGatgcctccctcctccttcctcaacCCCCGCCCCTGTCAGAGCAAGAGGCCCTCAAGGGGGCCTACTACAAACGGGCCCAACTTCTACCTGAGGACCCAGACCACCTCCTCACCAACTCCTCGCTCTCCGCTGCCCGTAAACTCCATGCCATTATCAATGTTGGCGGGCTGCGTTATCAATTACCCTGGACCACCTTGGAGGACTTCCCCCTGTCCCGACTTGGCCAGCTGCGCCTCTGCAGCAGCTTTGACGAGATCATGTGCGTCTGCGACGATTATGACATTGCCAGCAACGAGTACTTCTTCGATCGTTCGCCCTGTGCCTTCCGCACCATCCTGACCTTCCTGCGGGCCGGGAAGCT

Function

NR:

description
potassium voltage-gated channel subfamily G member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616676.2 False 3352 mRNA 0.49 3 63565587 63601970
XM_036988638.1 False 3356 mRNA 0.48 2 63597112 63601970
TU943081 True 662 TUCP 0.55 2 63565578 63597768

Neighbor

gene id symbol gene type direction distance location
LOC110532618 LOC106572627 coding upstream 51911 63460963 ~ 63513676 (+)
LOC110532617 LOC106572629 coding upstream 112500 63411204 ~ 63453087 (+)
sall4 LOC106572630 coding upstream 154955 63402411 ~ 63410632 (+)
LOC110532614 LOC106572631 coding upstream 202030 63359582 ~ 63363557 (+)
LOC110532612 LOC106572633 coding upstream 520068 63033474 ~ 63045519 (+)
LOC110532620 LOC106572626 coding downstream 4597 63606567 ~ 63647680 (+)
LOC110532622 LOC106572625 coding downstream 46794 63648764 ~ 63695332 (+)
g0s2 LOC106572624 coding downstream 106674 63708644 ~ 63709691 (+)
LOC110532625 LOC106572622 coding downstream 108574 63710544 ~ 63716275 (+)
LOC110532629 LOC106572620 coding downstream 127202 63729172 ~ 63737016 (+)
G829351 NA non-coding upstream 107797 63457546 ~ 63457790 (+)
G829347 NA non-coding upstream 111547 63453832 ~ 63454040 (+)
G829288 NA non-coding upstream 151833 63319983 ~ 63413754 (+)
G829267 NA non-coding upstream 271957 63293423 ~ 63293630 (+)
G829261 NA non-coding upstream 287495 63277892 ~ 63278092 (+)
G829530 LOC100194719 non-coding downstream 167147 63769117 ~ 63771336 (+)
G829539 NA non-coding downstream 187995 63789965 ~ 63790241 (+)
G829540 NA non-coding downstream 188451 63790421 ~ 63790709 (+)
G829541 NA non-coding downstream 188818 63790788 ~ 63791419 (+)
G829543 NA non-coding downstream 190802 63792772 ~ 63792985 (+)
LOC110532602 NA other upstream 937745 62623239 ~ 62627845 (+)
G828274 NA other upstream 1374981 62189182 ~ 62190606 (+)
G827039 NA other upstream 2314349 61212461 ~ 61251238 (+)
G826751 NA other upstream 2903681 60661369 ~ 60661906 (+)
G826653 NA other upstream 3002190 60563080 ~ 60563397 (+)
G830755 gp182 other downstream 712108 64314078 ~ 64316656 (+)
G830923 NA other downstream 1063778 64665748 ~ 64666311 (+)
G831299 LOC100653477 other downstream 1277737 64879707 ~ 64883543 (+)
LOC110531237 LOC106567057 other downstream 1764321 65186569 ~ 65405501 (+)
G831810 NA other downstream 1912423 65514393 ~ 65514985 (+)

Expression


Co-expression Network