Item | Value |
---|---|
gene id | LOC110532626 |
gene name | LOC106572619 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 63733028 ~ 63767705 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: rab GDP dissociation inhibitor alpha-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036988642.1 | False | 4582 | mRNA | 0.49 | 18 | 63736770 | 63767700 |
XM_021616690.2 | False | 5284 | mRNA | 0.50 | 17 | 63736770 | 63767703 |
XM_021616688.2 | False | 5324 | mRNA | 0.50 | 17 | 63736770 | 63767704 |
XM_021616691.2 | False | 5252 | mRNA | 0.50 | 16 | 63736770 | 63767704 |
XM_021616689.2 | False | 5292 | mRNA | 0.50 | 16 | 63736770 | 63767705 |
TU943933 | True | 3249 | lncRNA | 0.41 | 2 | 63733028 | 63737022 |
63,728,000
63,732,000
63,736,000
63,740,000
63,744,000
63,748,000
63,752,000
63,756,000
63,760,000
63,764,000
63,764,000
63,768,000
63,772,000
63,776,000
63,780,000
63,784,000
63,788,000
63,792,000
63,796,000
63,800,000
NC_048573.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110532624 | LOC106572621 | coding | downstream | 11799 | 63719206 ~ 63724971 (-) |
LOC110532613 | LOC106572632 | coding | downstream | 539556 | 63121692 ~ 63197214 (-) |
LOC110532610 | LOC106572636 | coding | downstream | 735034 | 62997657 ~ 63001736 (-) |
LOC101268951 | tnfrsf5b | coding | downstream | 919653 | 62810887 ~ 62817117 (-) |
LOC110532600 | LOC106572567 | coding | downstream | 1121879 | 62607951 ~ 62614891 (-) |
LOC110532627 | LOC100194719 | coding | upstream | 130 | 63767835 ~ 63791338 (-) |
LOC110532630 | LOC106572617 | coding | upstream | 31840 | 63799545 ~ 63810713 (-) |
LOC110532632 | LOC106572615 | coding | upstream | 96299 | 63862848 ~ 63899379 (-) |
LOC110532633 | LOC106572613 | coding | upstream | 134343 | 63902048 ~ 63906187 (-) |
LOC110532634 | LOC106572609 | coding | upstream | 146112 | 63913817 ~ 63921472 (-) |
G830203 | NA | non-coding | downstream | 37698 | 63585822 ~ 63699072 (-) |
G830127 | NA | non-coding | downstream | 157232 | 63478589 ~ 63579538 (-) |
G830115 | NA | non-coding | downstream | 271143 | 63465265 ~ 63465627 (-) |
G830113 | NA | non-coding | downstream | 278657 | 63457827 ~ 63458113 (-) |
G830108 | NA | non-coding | downstream | 283737 | 63450267 ~ 63453033 (-) |
G830321 | NA | non-coding | upstream | 22269 | 63789974 ~ 63790227 (-) |
G830297 | NA | non-coding | upstream | 28881 | 63796586 ~ 63797229 (-) |
G830324 | NA | non-coding | upstream | 35145 | 63802850 ~ 63803501 (-) |
G830596 | NA | non-coding | upstream | 187158 | 63954863 ~ 63955291 (-) |
G830597 | NA | non-coding | upstream | 189435 | 63957140 ~ 63957397 (-) |
G829644 | NA | other | downstream | 944274 | 62790588 ~ 62792496 (-) |
tmem269 | pss | other | downstream | 2018805 | 61683104 ~ 61717981 (-) |
G827668 | NA | other | downstream | 2664405 | 61028372 ~ 61072365 (-) |
LOC110532567 | LOC106572513 | other | downstream | 3461029 | 60227530 ~ 60275772 (-) |
G825961 | NA | other | downstream | 4097876 | 59638346 ~ 59638894 (-) |
G830543 | LOC108255233 | other | upstream | 260202 | 64027907 ~ 64041211 (-) |
LOC110532670 | hoxc8ab | other | upstream | 943967 | 64710256 ~ 64713744 (-) |
G831986 | NA | other | upstream | 1603148 | 65370853 ~ 65413071 (-) |
G832008 | NA | other | upstream | 1646790 | 65414495 ~ 65418096 (-) |