Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110532627 |
| gene name | LOC100194719 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 63767835 ~ 63791338 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021616695.2 | False | 3440 | mRNA | 0.46 | 14 | 63767835 | 63787019 |
| XR_005053317.1 | False | 4772 | mRNA | 0.44 | 13 | 63767835 | 63787153 |
| XR_005053318.1 | False | 3594 | mRNA | 0.44 | 13 | 63767835 | 63790902 |
| XR_005053319.1 | True | 3687 | mRNA | 0.44 | 13 | 63767835 | 63791338 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532626 | LOC106572619 | coding | downstream | 130 | 63733028 ~ 63767705 (-) |
| LOC110532624 | LOC106572621 | coding | downstream | 42864 | 63719206 ~ 63724971 (-) |
| LOC110532613 | LOC106572632 | coding | downstream | 570621 | 63121692 ~ 63197214 (-) |
| LOC110532610 | LOC106572636 | coding | downstream | 766099 | 62997657 ~ 63001736 (-) |
| LOC101268951 | tnfrsf5b | coding | downstream | 950718 | 62810887 ~ 62817117 (-) |
| LOC110532630 | LOC106572617 | coding | upstream | 8207 | 63799545 ~ 63810713 (-) |
| LOC110532632 | LOC106572615 | coding | upstream | 72666 | 63862848 ~ 63899379 (-) |
| LOC110532633 | LOC106572613 | coding | upstream | 110710 | 63902048 ~ 63906187 (-) |
| LOC110532634 | LOC106572609 | coding | upstream | 122479 | 63913817 ~ 63921472 (-) |
| LOC110532636 | LOC106572611 | coding | upstream | 148715 | 63940053 ~ 63952302 (-) |
| G830203 | NA | non-coding | downstream | 68763 | 63585822 ~ 63699072 (-) |
| G830127 | NA | non-coding | downstream | 188297 | 63478589 ~ 63579538 (-) |
| G830115 | NA | non-coding | downstream | 302208 | 63465265 ~ 63465627 (-) |
| G830113 | NA | non-coding | downstream | 309722 | 63457827 ~ 63458113 (-) |
| G830297 | NA | non-coding | upstream | 5248 | 63796586 ~ 63797229 (-) |
| G830324 | NA | non-coding | upstream | 11512 | 63802850 ~ 63803501 (-) |
| G830596 | NA | non-coding | upstream | 163525 | 63954863 ~ 63955291 (-) |
| G830597 | NA | non-coding | upstream | 165802 | 63957140 ~ 63957397 (-) |
| G830601 | NA | non-coding | upstream | 173281 | 63964619 ~ 63964855 (-) |
| G829644 | NA | other | downstream | 975339 | 62790588 ~ 62792496 (-) |
| tmem269 | pss | other | downstream | 2049870 | 61683104 ~ 61717981 (-) |
| G827668 | NA | other | downstream | 2695470 | 61028372 ~ 61072365 (-) |
| LOC110532567 | LOC106572513 | other | downstream | 3492094 | 60227530 ~ 60275772 (-) |
| G825961 | NA | other | downstream | 4128941 | 59638346 ~ 59638894 (-) |
| G830543 | LOC108255233 | other | upstream | 236569 | 64027907 ~ 64041211 (-) |
| LOC110532670 | hoxc8ab | other | upstream | 920334 | 64710256 ~ 64713744 (-) |
| G831986 | NA | other | upstream | 1579515 | 65370853 ~ 65413071 (-) |
| G832008 | NA | other | upstream | 1623157 | 65414495 ~ 65418096 (-) |
