XLOC_002676


Basic Information

Item Value
gene id XLOC_002676
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17085524 ~ 17088911 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006021
TGGGTAGCCATGATGGCGTAATTTAAGGTGTTTTCTGTACAGCTCCGCTTTCTGTGGATCTGGAGGTTGTGAATGCGTTCTCCTTGGGTGAGCAAACCGATGATTTTCTGTTCTGGAGCCAATGAGATGACAGCTGGTCGAAAAAGAGGTTGTATTGCTTTCATACCACAGTCCAGTAGTCCAACTTTTTTCTCTACAGGATGGTTCTGCTCTTCTTAAAGCTTGCTCCACTTCCAGACATGTGGTTTTCTGAGCCACAGTGCCAAGTGAGACAttcgaggaggaggaggaacagATAGATGGAGACGGAGATGGAGGATCCTCTGTAGAATCAAAAACTGGATGTATTTCTTCAGAGGTCAATCCACTACATTGCTCTAGCAGCAGAAGCCTCTTGTCCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006021 True 401 lncRNA 0.46 2 17085524 17088911

Neighbor

gene id symbol gene type direction distance location
XLOC_002675 fam166b coding downstream 2147 17077177 ~ 17083377 (-)
XLOC_002674 NA coding downstream 58413 17016799 ~ 17027111 (-)
XLOC_002673 NA coding downstream 74626 17006225 ~ 17010898 (-)
XLOC_002672 stoml2 coding downstream 217313 16857529 ~ 16868211 (-)
XLOC_002671 fbn2a coding downstream 589927 16313851 ~ 16495597 (-)
XLOC_002677 RNF208 coding upstream 13991 17102902 ~ 17103651 (-)
XLOC_002678 BX324123.4 coding upstream 15387 17104298 ~ 17132910 (-)
XLOC_002679 slc5a1 coding upstream 46720 17135631 ~ 17159761 (-)
XLOC_002680 ywhah coding upstream 77124 17166035 ~ 17170086 (-)
XLOC_002681 depdc5 coding upstream 82693 17171604 ~ 17222083 (-)
XLOC_002666 NA non-coding downstream 1361420 15716739 ~ 15724104 (-)
XLOC_002660 CT027832.1 non-coding downstream 1999227 15082410 ~ 15086297 (-)
XLOC_002657 NA non-coding downstream 2050564 15032972 ~ 15034960 (-)
XLOC_002684 FP091248.1 non-coding upstream 253454 17342365 ~ 17342481 (-)
XLOC_002685 NA non-coding upstream 348579 17437490 ~ 17442421 (-)
XLOC_002688 NA non-coding upstream 421069 17509980 ~ 17519034 (-)
XLOC_002689 BX927385.3 non-coding upstream 444699 17533610 ~ 17543022 (-)
XLOC_002656 NA non-coding downstream 2042776 15031006 ~ 15042748 (-)

Expression


Co-expression Network