XLOC_026761


Basic Information

Item Value
gene id XLOC_026761
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49934636 ~ 49937735 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053126
CCCGATGACTCCCACACAGCCACAATTACTGCGGTGCCACTGTAAGCGGAGGATCCCGATGCTGCACtcTTCTTCTGTGTCCTGAGTTCCCTGGCCTGTCAGTCTGGAGTGGATTGCTGCCAATATCTATGGTTTTGACCACTGTTGCTTCCATTCTTGGTTGGCTGTTGATTCTGGAGCATCTTGTCCCTACCACTGGCTTTCCTGTGTCATTGCCTGCATTGCTTGGACCTTATCATCACCTTGTCTGTCTAATTAATTTGGTCAAAcacctttttgttttgttcattggtCAACTGGGTCTGCTTTCTTGCAACCAGCTATGAAAAAGTGAGTTTTGTATCTCCTTCTAGGGAAATCTGCATAAATCAGGCAATTAGTGTAAATTCTTTCTGTGATGGAAACAGGATTTTTACAGAACAGAATTACCTTATAAGTCAAAAACCATTATTATCATGaccactctaaaaaaaaaaaatctgtccttGAACAAGCAAAAAGCACTGCCTTATGCagttaaacaattataataataaaaagctagCAATAATTGTTAGTAAATACTGAAGTATAAAACCTATAAGTgctaaaataatgaaatgcaaTCAGGAAGAAACAGAAGCTAAGGTATGAGCAAATTTATCAACAAAGAGACTGACTTGACATCTCATGCAAATGGTAATAGGGAATTAAACCTAAAACAGAACCTAAATGTGACAGTAGAAGCCAATTACTTTAGTTTTTGTACTGTGATTTCCAAGACAATAAAATGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053126 True 773 lncRNA 0.38 2 49934636 49937735

Neighbor

gene id symbol gene type direction distance location
XLOC_026760 gcgra coding downstream 9323 49757578 ~ 49925313 (-)
XLOC_026759 zgc:153426 coding downstream 368272 49559261 ~ 49566364 (-)
XLOC_026758 CR847534.1 coding downstream 379724 49551580 ~ 49554912 (-)
XLOC_026757 asf1ba coding downstream 419762 49504919 ~ 49514874 (-)
XLOC_026756 prkacaa coding downstream 430613 49459828 ~ 49504023 (-)
XLOC_026762 si:ch1073-100f3.2 coding upstream 94659 50032394 ~ 50046004 (-)
XLOC_026763 mrpl12 coding upstream 116452 50054187 ~ 50066528 (-)
XLOC_026764 hgs coding upstream 139058 50076793 ~ 50118140 (-)
XLOC_026765 cldnk coding upstream 185772 50123507 ~ 50127668 (-)
XLOC_026766 btr02 coding upstream 189991 50127726 ~ 50147160 (-)
XLOC_026754 NA non-coding downstream 516291 49406158 ~ 49418345 (-)
XLOC_026752 NA non-coding downstream 561960 49186398 ~ 49372676 (-)
XLOC_026748 BX784040.1 non-coding downstream 856757 49077762 ~ 49077879 (-)
XLOC_026747 NA non-coding downstream 897854 49023900 ~ 49036782 (-)
XLOC_026745 NA non-coding downstream 933343 48999903 ~ 49001293 (-)
XLOC_026769 NA non-coding upstream 401045 50338780 ~ 50341046 (-)
XLOC_026770 NA non-coding upstream 495816 50433551 ~ 50438278 (-)
XLOC_026771 NA non-coding upstream 496058 50433793 ~ 50434423 (-)
XLOC_026773 CR812464.1 non-coding upstream 791124 50728859 ~ 50749116 (-)
XLOC_026777 NA non-coding upstream 1322096 51259831 ~ 51273723 (-)

Expression


Co-expression Network