LOC110532679 (LOC106572652)


Basic Information

Item Value
gene id LOC110532679
gene name LOC106572652
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65052604 ~ 65061874 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988699.1
AAAGAAAGGCTGCCCCCAAGTGGTGAAACTGAAATCAGAACCCGGAAATAGGTGGTGAAATTAGGACGTTGTAGGACACGGTTTATCGGAGCTATCTCCTCTTCTTACTCGTAGTTAAATAACTTTTAAACCCTACTTTAATTTTAAAGTGTCATGGAGCATGTATCAAACAAGATGCCTTTGACTGAGCCACAACGGATAAGACAGGAGTGAAGAGACCTCCCTGCCCCTAACAGTCACACTTGGACAAACCCATCATGTTGGTGACAGCCTACCTGGCCATGGTGGTCCTATTGGTGCTATGTGTCGGTCTGGAGCTAACGGCACGTCGCCTCACCCCACCTCAACCCACCCCCTCTGCCATGGGCACCAACCCTGCCTTCCGTAGGTTCCAGACCGTGTTCCTCCGAGGCTACCTCTTAGCCTTGTCAGCTGACTGGCTGCAGGGGCCATACCTCTACAAGCTCTACCGCCATTACAGCTTCCTGGAGTCCCAGATAGCCATCCTGTATGTCGTTGGCCTGGCCTCCTGTGTGCTGTTTGCCCCCGTGGCTAGCTGGCTTCCTCAGGTCCTGGGGCGGAGACGGACCTGCCTGCTCTTCTGCGTGGCCTACTCAGCCTGTTGCCTCACCAAGCTGTCCCGTGACTACTTTGTCCTGATCCTGGGTCGCGTGCTAGGAGGCCTGTCCACCTCTTTGCTCTCCACAGCCTTCCAGGCCTGGTACGTGCACCGACATGTTGACGTCCACGACTTCCCTAAAGAATGGATCCCCAGTACCTTCACCAAGGCTGCTAGCTGGAACCACGGGCTAGCGATGGGGGCTGGGCTGGTGGCTAACATGTTGGCTGAGTGGCTCCACCTGGGGCCTGTGGTGCCCTTCCTCCTGGCCGTGCCCTGTCTTGGGGCCTGTGGCTGGGTGGTGCTGACTGATTGGGGCCTGGAGGAGAAGGATGGAAGCCTGGAAGGGGACAACAAGAAGCCCTTGCTCGGTCCTTCTAGTTCAGCACCTCTGGCCCGGGCTTCTGCACGGGCCCGGTTCTGGCGCAGCTGTCAGGAAGGCCTCCGCTGTCTCTTATCAGACAGACGGGTGATGCTTCTAGGAGGAGTCCAGGCTCTATTTGAGAGTGTCCTCTATATATTCATCTTCCTGTGGACCCCCGTCCTGGACCCCTATGGCCCTCCGCTGGGCATGGTCTTCTCCTGTCTGATGGCAGCCAGTATGGCGGGGTCCCTGCTCTACCGCCTGGCCACCTCCACCCGCTACCGCCTTCAGCCTGGGCACCTCCTCTGCTTCTCCATGCTGCTCGCCTTTTTCTCCTTCTTCATGCTCATCTTCTCCACTGCACCGGGCCAGCCCAGACCCCACGAGTCCCTGCTGGCCTTCCTGCTGCTGGAGCTGGCCAGTGGCCTCTACTTCCCTGCTGTCAGCTTCCTCCATGGGAGGGTGATCCCAGAGGAGAAGAGGGCCGGGGTGCTGGCCTGGTTCAGACTGCCTCTGCACCTTCTGGCCTGCCTGGGGCTGCTGGCGCTCCACAGGGAGGTGTCGGGGACCGGAGGGGGTGAGGGCGGTAGTGGAACCAGGCATATGTTTGGTGGTTGTGCTGTTTTGATGCTAGCTGCACTCTTGGCTGTGGTCAGTCTCTTTACACTGGGAAGGAACGATGTGGATCTCAGACTGGATGGACCCAAAGGAGAGGGAGATATATGACATTTAGATTCAGAAAACTGAACTGTCCCAACATTGGGCAATGCCATGGAGGAGGAGGACTAGGAATACACTTACTGCTTTGTTTACAGCGATGAAGAGTTGTTTGGGAACTGAacaacttttgtatgactgaaaaCTGAAGCTTAATCAACATAGGAGTTGCTAATATAAGACAATGATTTAAAATAATCTGGTGTTGGTAaggtatatattttttgttgcaAGATTTCCTGATATTTATTTGTTTTAATTTTGTTAAGACTAGCAAATATCTTGTTAGATTGTTGAGTATATGaagaaaatgtgtttatttggaTTTACTATGTGGCGGTCTGCATCTTGtcaaggggttgggttaaatgcagaagatacactttggttgaatgcattcagttgtgcaactgacttatttctttaaacacacacacacacacacactctgacgcACTTGCTTGTGTATTAATGTTGCACCAGTTGGTAGCTCCAGGATGTTATTTATATCTCAGCCTGACCACGTTATAGGGTTTATCAACTGCATTGTTCAGGGTATACCTCTCAGCCAGGGCAGAACAAGGCTTCCATCACTAGCGTTGTTCAGGGTGTACCTCTCAGCCA
>XM_036988700.1
GGATTATGGTGAGCGAGATAGCTAGCTGTGTGTCTAGCTCTGGTCCATTGAGTTACGTGCGGCTTGAGCTTCCTTCATCGCCCTACATGCAAATATATGTTTTAGAATTAACCCAATATAGACCACAGCATTTCGTTTCCAATGGGAACTAGTTGTGGAGAGTCGACTCCAAAAGATTCGATTCCTCGACTTCTATTTCTGGGTGTCAAGCTTCTATTCCGACTTCTAAGATTCTGTATTTTTGCAACGGATGAAACTATTTTCCGTAGACTACTTCGAGAACACAAACTCTCGAATCTttcacagggagagagatgggaggggcacAGCCTGGCCTGTCTGCCACCTGGCAGAACCGTGCATCGGTTATCAAAAGATGTACGCCTTTGACTGAGCCACAACGGATAAGACAGGAGTGAAGAGACCTCCCTGCCCCTAACAGTCACACTTGGACAAACCCATCATGTTGGTGACAGCCTACCTGGCCATGGTGGTCCTATTGGTGCTATGTGTCGGTCTGGAGCTAACGGCACGTCGCCTCACCCCACCTCAACCCACCCCCTCTGCCATGGGCACCAACCCTGCCTTCCGTAGGTTCCAGACCGTGTTCCTCCGAGGCTACCTCTTAGCCTTGTCAGCTGACTGGCTGCAGGGGCCATACCTCTACAAGCTCTACCGCCATTACAGCTTCCTGGAGTCCCAGATAGCCATCCTGTATGTCGTTGGCCTGGCCTCCTGTGTGCTGTTTGCCCCCGTGGCTAGCTGGCTTCCTCAGGTCCTGGGGCGGAGACGGACCTGCCTGCTCTTCTGCGTGGCCTACTCAGCCTGTTGCCTCACCAAGCTGTCCCGTGACTACTTTGTCCTGATCCTGGGTCGCGTGCTAGGAGGCCTGTCCACCTCTTTGCTCTCCACAGCCTTCCAGGCCTGGTACGTGCACCGACATGTTGACGTCCACGACTTCCCTAAAGAATGGATCCCCAGTACCTTCACCAAGGCTGCTAGCTGGAACCACGGGCTAGCGATGGGGGCTGGGCTGGTGGCTAACATGTTGGCTGAGTGGCTCCACCTGGGGCCTGTGGTGCCCTTCCTCCTGGCCGTGCCCTGTCTTGGGGCCTGTGGCTGGGTGGTGCTGACTGATTGGGGCCTGGAGGAGAAGGATGGAAGCCTGGAAGGGGACAACAAGAAGCCCTTGCTCGGTCCTTCTAGTTCAGCACCTCTGGCCCGGGCTTCTGCACGGGCCCGGTTCTGGCGCAGCTGTCAGGAAGGCCTCCGCTGTCTCTTATCAGACAGACGGGTGATGCTTCTAGGAGGAGTCCAGGCTCTATTTGAGAGTGTCCTCTATATATTCATCTTCCTGTGGACCCCCGTCCTGGACCCCTATGGCCCTCCGCTGGGCATGGTCTTCTCCTGTCTGATGGCAGCCAGTATGGCGGGGTCCCTGCTCTACCGCCTGGCCACCTCCACCCGCTACCGCCTTCAGCCTGGGCACCTCCTCTGCTTCTCCATGCTGCTCGCCTTTTTCTCCTTCTTCATGCTCATCTTCTCCACTGCACCGGGCCAGCCCAGACCCCACGAGTCCCTGCTGGCCTTCCTGCTGCTGGAGCTGGCCAGTGGCCTCTACTTCCCTGCTGTCAGCTTCCTCCATGGGAGGGTGATCCCAGAGGAGAAGAGGGCCGGGGTGCTGGCCTGGTTCAGACTGCCTCTGCACCTTCTGGCCTGCCTGGGGCTGCTGGCGCTCCACAGGGAGGTGTCGGGGACCGGAGGGGGTGAGGGCGGTAGTGGAACCAGGCATATGTTTGGTGGTTGTGCTGTTTTGATGCTAGCTGCACTCTTGGCTGTGGTCAGTCTCTTTACACTGGGAAGGAACGATGTGGATCTCAGACTGGATGGACCCAAAGGAGAGGGAGATATATGACATTTAGATTCAGAAAACTGAACTGTCCCAACATTGGGCAATGCCATGGAGGAGGAGGACTAGGAATACACTTACTGCTTTGTTTACAGCGATGAAGAGTTGTTTGGGAACTGAacaacttttgtatgactgaaaaCTGAAGCTTAATCAACATAGGAGTTGCTAATATAAGACAATGATTTAAAATAATCTGGTGTTGGTAaggtatatattttttgttgcaAGATTTCCTGATATTTATTTGTTTTAATTTTGTTAAGACTAGCAAATATCTTGTTAGATTGTTGAGTATATGaagaaaatgtgtttatttggaTTTACTATGTGGCGGTCTGCATCTTGtcaaggggttgggttaaatgcagaagatacactttggttgaatgcattcagttgtgcaactgacttatttctttaaacacacacacacacacacactctgacgcACTTGCTTGTGTATTAATGTTGCACCAGTTGGTAGCTCCAGGATGTTATTTATATCTCAGCCTGACCACGTTATAGGGTTTATCAACTGCATTGTTCAGGGTATACCTCTCAGCCAGGGCAGAACAAGGCTTCCATCACTAGCGTTGTTCAGGGTGTACCTCTCAGCCA
>XM_036988701.1
GGATTATGGTGAGCGAGATAGCTAGCTGTGTGTCTAGCTCTGGTCCATTGAGTTACGTGCGGCTTGAGCTTCCTTCATCGCCCTACATGCAAATATATGTTTTAGAATTAACCCAATATAGACCACAGCATTTCGTTTCCAATGGGAACTAGTTGTGGAGAGTCGACTCCAAAAGATTCGATTCCTCGACTTCTATTTCTGGGTGTCAAGCTTCTATTCCGACTTCTAAGATTCTGTATTTTTGCAACGGATGAAACTATTTTCCGTAGACTACTTCGAGAACACAAACTCTCGAATCTttcacagggagagagatgggaggggcacAGCCTGGCCTGTCTGCCACCTGGCAGAACCGTGCATCGGTTATCAAAAGATCCTTTGACTGAGCCACAACGGATAAGACAGGAGTGAAGAGACCTCCCTGCCCCTAACAGTCACACTTGGACAAACCCATCATGTTGGTGACAGCCTACCTGGCCATGGTGGTCCTATTGGTGCTATGTGTCGGTCTGGAGCTAACGGCACGTCGCCTCACCCCACCTCAACCCACCCCCTCTGCCATGGGCACCAACCCTGCCTTCCGTAGGTTCCAGACCGTGTTCCTCCGAGGCTACCTCTTAGCCTTGTCAGCTGACTGGCTGCAGGGGCCATACCTCTACAAGCTCTACCGCCATTACAGCTTCCTGGAGTCCCAGATAGCCATCCTGTATGTCGTTGGCCTGGCCTCCTGTGTGCTGTTTGCCCCCGTGGCTAGCTGGCTTCCTCAGGTCCTGGGGCGGAGACGGACCTGCCTGCTCTTCTGCGTGGCCTACTCAGCCTGTTGCCTCACCAAGCTGTCCCGTGACTACTTTGTCCTGATCCTGGGTCGCGTGCTAGGAGGCCTGTCCACCTCTTTGCTCTCCACAGCCTTCCAGGCCTGGTACGTGCACCGACATGTTGACGTCCACGACTTCCCTAAAGAATGGATCCCCAGTACCTTCACCAAGGCTGCTAGCTGGAACCACGGGCTAGCGATGGGGGCTGGGCTGGTGGCTAACATGTTGGCTGAGTGGCTCCACCTGGGGCCTGTGGTGCCCTTCCTCCTGGCCGTGCCCTGTCTTGGGGCCTGTGGCTGGGTGGTGCTGACTGATTGGGGCCTGGAGGAGAAGGATGGAAGCCTGGAAGGGGACAACAAGAAGCCCTTGCTCGGTCCTTCTAGTTCAGCACCTCTGGCCCGGGCTTCTGCACGGGCCCGGTTCTGGCGCAGCTGTCAGGAAGGCCTCCGCTGTCTCTTATCAGACAGACGGGTGATGCTTCTAGGAGGAGTCCAGGCTCTATTTGAGAGTGTCCTCTATATATTCATCTTCCTGTGGACCCCCGTCCTGGACCCCTATGGCCCTCCGCTGGGCATGGTCTTCTCCTGTCTGATGGCAGCCAGTATGGCGGGGTCCCTGCTCTACCGCCTGGCCACCTCCACCCGCTACCGCCTTCAGCCTGGGCACCTCCTCTGCTTCTCCATGCTGCTCGCCTTTTTCTCCTTCTTCATGCTCATCTTCTCCACTGCACCGGGCCAGCCCAGACCCCACGAGTCCCTGCTGGCCTTCCTGCTGCTGGAGCTGGCCAGTGGCCTCTACTTCCCTGCTGTCAGCTTCCTCCATGGGAGGGTGATCCCAGAGGAGAAGAGGGCCGGGGTGCTGGCCTGGTTCAGACTGCCTCTGCACCTTCTGGCCTGCCTGGGGCTGCTGGCGCTCCACAGGGAGGTGTCGGGGACCGGAGGGGGTGAGGGCGGTAGTGGAACCAGGCATATGTTTGGTGGTTGTGCTGTTTTGATGCTAGCTGCACTCTTGGCTGTGGTCAGTCTCTTTACACTGGGAAGGAACGATGTGGATCTCAGACTGGATGGACCCAAAGGAGAGGGAGATATATGACATTTAGATTCAGAAAACTGAACTGTCCCAACATTGGGCAATGCCATGGAGGAGGAGGACTAGGAATACACTTACTGCTTTGTTTACAGCGATGAAGAGTTGTTTGGGAACTGAacaacttttgtatgactgaaaaCTGAAGCTTAATCAACATAGGAGTTGCTAATATAAGACAATGATTTAAAATAATCTGGTGTTGGTAaggtatatattttttgttgcaAGATTTCCTGATATTTATTTGTTTTAATTTTGTTAAGACTAGCAAATATCTTGTTAGATTGTTGAGTATATGaagaaaatgtgtttatttggaTTTACTATGTGGCGGTCTGCATCTTGtcaaggggttgggttaaatgcagaagatacactttggttgaatgcattcagttgtgcaactgacttatttctttaaacacacacacacacacacactctgacgcACTTGCTTGTGTATTAATGTTGCACCAGTTGGTAGCTCCAGGATGTTATTTATATCTCAGCCTGACCACGTTATAGGGTTTATCAACTGCATTGTTCAGGGTATACCTCTCAGCCAGGGCAGAACAAGGCTTCCATCACTAGCGTTGTTCAGGGTGTACCTCTCAGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K24175 MFSD5; MFS transporter, MFS domain-containing protein family, molybdate-anion transporter

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988699.1 False 2324 mRNA 0.53 3 65052604 65061874
XM_036988700.1 False 2530 mRNA 0.53 3 65052837 65061874
XM_036988701.1 True 2525 mRNA 0.53 3 65052837 65061874

Neighbor

gene id symbol gene type direction distance location
LOC110532678 LOC106572653 coding upstream 11341 65013877 ~ 65041263 (+)
LOC110532676 LOC106572538 coding upstream 183046 64847745 ~ 64869558 (+)
LOC110532663 LOC106572586 coding upstream 551804 64494767 ~ 64500800 (+)
LOC110532661 LOC106572584 coding upstream 562400 64482555 ~ 64490204 (+)
LOC110516183 LOC106572588 coding upstream 599134 64443372 ~ 64453470 (+)
LOC110532681 LOC106572651 coding downstream 2599 65064473 ~ 65073406 (+)
LOC110532682 LOC106572650 coding downstream 15571 65077445 ~ 65135899 (+)
LOC118966190 NA coding downstream 104781 65166655 ~ 65168430 (+)
LOC110531237 LOC106567057 coding downstream 124695 65186569 ~ 65405501 (+)
LOC110531239 LOC106572674 coding downstream 578751 65640625 ~ 65646547 (+)
G831443 NA non-coding upstream 65187 64987129 ~ 64987417 (+)
G831334 NA non-coding upstream 123729 64928165 ~ 64928875 (+)
G831281 NA non-coding upstream 239736 64812655 ~ 64812868 (+)
G831272 NA non-coding upstream 246851 64805531 ~ 64805753 (+)
G830991 NA non-coding upstream 287478 64764734 ~ 64765126 (+)
G831522 NA non-coding downstream 78550 65140424 ~ 65159690 (+)
G831524 NA non-coding downstream 81342 65143216 ~ 65150591 (+)
G831638 NA non-coding downstream 114480 65176354 ~ 65176590 (+)
G831712 NA non-coding downstream 255114 65316988 ~ 65317638 (+)
G831299 LOC100653477 other upstream 169061 64879707 ~ 64883543 (+)
G830923 NA other upstream 386293 64665748 ~ 64666311 (+)
G830755 gp182 other upstream 735948 64314078 ~ 64316656 (+)
LOC110532619 LOC106572645 other upstream 1454836 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 2424762 62623239 ~ 62627845 (+)
G831810 NA other downstream 452519 65514393 ~ 65514985 (+)
G831865 NA other downstream 561064 65622938 ~ 65623316 (+)
LOC110532705 LOC106567051 other downstream 607555 65669353 ~ 65671483 (+)
LOC110532701 LOC106572669 other downstream 736503 65754497 ~ 65801814 (+)

Expression


Co-expression Network