LOC110532681 (LOC106572651)


Basic Information

Item Value
gene id LOC110532681
gene name LOC106572651
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65064473 ~ 65073406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616773.2
GCGTGGCTGTTGGATTAAGAAGCTGCAGCATCAGAAAGGGTTTAATATAAGAGAAGCAACAGCAGAGAGCGACCTAGTGTCAGTCCTTTTATTTTGACTGCAAGTACGACTGGGCAACAAGGATACATATAAGAGGATACAATAACAAAAGGAAAGCAGAGCTTCTTTGACTGGAGCAGAGAGATAAATAAACCATTGTAGTATCTGCTGCAGACACCAAACACAGCCATTATGACCCAGGGCAAGATTTCAGTCGCAAACAAAGCTGCTGAAGCAGGAGAGAAGCAGTATGGGACCTCAAGTGGAGAATCAGGAGGGCCACCTGCCCCTCCCACCTATGAGGAGGCCACTGGCACAAGTGAGAAAGGCCTCAGCGGCAGCCCCTGTTACGGTGGGGCTTGTCCTAGTGACGAGGAGATGCTAACAGAATTCAGCTGGAGTGATAAAAACATCCGGCGGATCTTTATCCGCAAGGTTTACTCCATCTTGATGATCCAACTTCTTGTCACTCTTTCCATAGTGGCTCTCTTCACATTCTGTGAACCAGTGAAGATCTACATTCAGTCCAACCCTGGATGGTACTGGGCTTCTTATGCTGTATTCTTTGTCACATACATTACACTTGTCTGCTGTCCTGGACCAAGGAGACAGTTTCCATGGAATCTGATCCTGCTAGCCGTCTTTaccctctctctctcctatatgACAGGGATGCTATCCAGTTATTATAACACCAAGTCAGTGGTGATGTGTCTGGGTATTACTGCTATGGTCTGTCTTACGGTCACTCTCGTCAGCTTCCAAACTAAGTTTGACGTGACCTCATGCCAAGGCGTATTGTTTTCCTTCTGCATGGTCATGATGGTGTCTGGACTGGTCTTGGCCATCGCCCTGCCCTACGGATATGTGCCCTGGGTGCATGGTGTCTATGGTGTCTTGGGAGCGTTACTGTTTACCATGTTTTTGGCGTTTGACACACAGCTACTGATGGGGAACAAGCGCTACACAATAAGTCCAGAGGAATACGTCTTTGCCACTCTCAACATCTACCTAGATATTATCTACATCTTCTCCTTCTTCCTGTCCCTGTTTGGAACAGAGAGAACAAACTGAATCCACATCCAGGCCAGCATTGCAGATCACCATCTACACAGGACCCGTATTCATAGTCTCAAACTGCATTTACACATGTAGCCAAATTCAGATTATTTTTTCACTAATtgctattttgaccaatcagatcagctctaaaAAAtgtctgatgtgaaaagatcagatgtgattggtcaaaataccaattagtggagaAAGGTCTGAATTGGGCTGCAGCCTCAGAGTAGTAGTGTTGATCAAGGATTTGCCATTtagatcatcaaatcaaatgtatatagcccttctaacatcagctgatatctcaaagtgctgtacagaaacacagcctaaaaccccaaacagctagcaatg

Function

NR:

description
protein lifeguard 2-like isoform X2

GO: NA

KEGG:

id description
K24205 TMBIM, LFG; protein lifeguard

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616773.2 True 1464 mRNA 0.45 12 65064473 65073406

Neighbor

gene id symbol gene type direction distance location
LOC110532679 LOC106572652 coding upstream 2599 65052604 ~ 65061874 (+)
LOC110532678 LOC106572653 coding upstream 23210 65013877 ~ 65041263 (+)
LOC110532676 LOC106572538 coding upstream 194915 64847745 ~ 64869558 (+)
LOC110532663 LOC106572586 coding upstream 563673 64494767 ~ 64500800 (+)
LOC110532661 LOC106572584 coding upstream 574269 64482555 ~ 64490204 (+)
LOC110532682 LOC106572650 coding downstream 4039 65077445 ~ 65135899 (+)
LOC118966190 NA coding downstream 93249 65166655 ~ 65168430 (+)
LOC110531237 LOC106567057 coding downstream 113163 65186569 ~ 65405501 (+)
LOC110531239 LOC106572674 coding downstream 567219 65640625 ~ 65646547 (+)
LOC110532705 LOC106567051 coding downstream 595947 65669353 ~ 65671483 (+)
G831443 NA non-coding upstream 77056 64987129 ~ 64987417 (+)
G831334 NA non-coding upstream 135598 64928165 ~ 64928875 (+)
G831281 NA non-coding upstream 251605 64812655 ~ 64812868 (+)
G831272 NA non-coding upstream 258720 64805531 ~ 64805753 (+)
G830991 NA non-coding upstream 299347 64764734 ~ 64765126 (+)
G831522 NA non-coding downstream 67018 65140424 ~ 65159690 (+)
G831524 NA non-coding downstream 69810 65143216 ~ 65150591 (+)
G831638 NA non-coding downstream 102948 65176354 ~ 65176590 (+)
G831712 NA non-coding downstream 243582 65316988 ~ 65317638 (+)
G831299 LOC100653477 other upstream 180930 64879707 ~ 64883543 (+)
G830923 NA other upstream 398162 64665748 ~ 64666311 (+)
G830755 gp182 other upstream 747817 64314078 ~ 64316656 (+)
LOC110532619 LOC106572645 other upstream 1466705 63565578 ~ 63601970 (+)
LOC110532602 NA other upstream 2436631 62623239 ~ 62627845 (+)
G831810 NA other downstream 440987 65514393 ~ 65514985 (+)
G831865 NA other downstream 549532 65622938 ~ 65623316 (+)
LOC110532701 LOC106572669 other downstream 724971 65754497 ~ 65801814 (+)

Expression


Co-expression Network