LOC110532704 (LOC106592425)


Basic Information

Item Value
gene id LOC110532704
gene name LOC106592425
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65673785 ~ 65682112 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616800.2
CTGAGGATAGGTGAATCTAGAAAGATAGACTAGAGCAAAGTACCAGTTAGACGCACAATACAAAGACTTGTGTGAAACAATTGAATACTGCATTTATTGCAGCTTTACATTGGGCTTCAGACATATTTGAATCTAAATAAATCTACTGCAAAGGATACATTTAACATGGCAGCTGGTGAGAGAATGAATGCTGATGACTGCAATGGACATTCATATATGTCAGCCAGTGGAGGAGAGACAGcgacggagcatggtgatttctGTGGAGGTCTGAGGGTTCCGGCCGTGAGAACTCAACAGTCCTCTCTCAACCAATCTCTCGGTGTGAACTCTATTAAGgtagaggaggacagtgaaaATGAGCCTGTTGGTGCTCTACAgccagagaggagaaaaggagagagtgatgacaGAGAGGACACAATAGAAGACGGGAGTGGAGAGCTGGGAGGAAGGGTGGGTCGAGGGAGTGCAGGAAGTGGTTACGGGGAGCTGGCCAGTCCTCAGCCTGCATCCCCTGGTCCCATCCGACTGCCCAATGGGAAGCTCCAATGTGACGTGTGTGGAATGAACTGTATCGGGCCCAATGTACTGATGGTGCACAAGCGCATCCACACAGGTGAGCGTCCGTTCCAGTGTACCCAGTGTGGAGCCTCCTTCACCCAGAAAGGGAACCTGCTGCGCCACATAAAGCTGCACTCTGGAGAGAAACCCTTTAAATGTCCCTTCTGTAACTACGCCTGTCGCCGCCGGGACGCACTCTCTGGACACATCCGCACACACACTGTGCCCTCTCTGACAGTGGGTAAACCTTACAAGTGCAGTTACTGTGGTCGTAGCTACAAGCAACAGATCACCCTGGAAGAACACCTTGAACGCTGCCACAACTACCTAAAGTGTCTACAGAACCATCAGCCAGCACTCAGCACTGAACACACTGCACAGGGTATGGAGCCGATGTCTGAGCCAGAGGCTGTCCTCCAGCCGTCCACTGAGAAACTGTCTTTTATAGACAGACTGGTGAACACCATCACCAAACGCAAGAGGTCCACTCCACAGAAGTTTCTGGGAGAAAAGCACATGAGGCTCAACGAGCCTGATATAACTTCTGAACTATCCCCTGGTCCTGAAAAGGAAAAGGATGGGGACCTGCACTCTGCACCCAACTCTCACCTTGAGGGAGAGGCTGGTGATGCAGGGTTAGTGGGGATGGGGGGCAGGTATCTCCACATGTATGGAGGTGATGGCGACCCTGGGTCTGAGCCACCTCAGCTGGCCCTGCCCCTGCCctactctgcctgcctgtctgacccCAGCCCAGTCAGCAGCTCTGTTTATAGCCACCCGATTCCTCTGGGTCCCCAGGTCAATGGAGCCGTAGGTGGGCGTGGAGGTGGGGTAGCGGCCAGGTTTGTGGAGCTCGCTGGACGGGAAGCAGGCGAGGGACACAAGGACATACCCTCAGGTCAGAGCCCCACGGTCAGCAATGGCTACAGCAATGGCCCCAGCAATGGCTGCCATGATTTCAAAGACAAGTCCGACACAGAGAGCAAAGCAGAGGAGCAGCAGAGCACCGGTGTTACAGCTCCAACCAGCAACTCCAACAACCACCACTTCCTCCCTAACCTTCAGTACGTAGCCCCAGCCCTGCCCAGCAGCCATCGCGACCGCCGTCCAAACCCCAATCCCAGACACGCCCAAGACccagatatagagagggagagagggtacaccgacaccaccatccccaccactGTGAAGGGATCGGGGAGCCCTGGTCCAGGGTCACCATCCATCTCCGGGGAAACTTCGATACAGGTACAGCTGGTGGACAGGGAGGGACGAGCGGTGCGGTCATTCCGCTGTGAGCACTGTCGCATGTTCTTCCTGGACCACGTGATGTTCACCATCCACATGGGCTGCCACGGATTCCACCAGCCTTTCCAGTGCAACGTCTGTGGCCACTGCAGCTGCAACCGCTACCAGTTCACCTCGCACATCATCCGCGGGGAGCACCAGGTGGGCTGAGGATGGGAGCACCAGGTGGGCTGAGGACGGGAGTACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACGGGAGCACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACGGGAGTACCAGGTGGGCTGAGGACAGGAGTACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACAGGAGTACCAGGTGGGCTGAGGACAGGAGTACCAGGTGGGCTGAGGACAGGAGTACCAGGTGGGCTGAGGACGGGAATACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACAGGAGCACCAGGTGGGCTGAGGACGGGAGCGAAGGGGGAGAGTCGGTCCCAACTGCCCTACCCCTTAGCCCTTCCCCTTCAATGTTTACACATCTGAAGGATCTGGATAGGTATAATCAGTGTAGTGGTGGAGATTTCACTGTATTGCTTCCACATTACAAGGGAGTGGGAGTGAATTGAGACCGGCTGGGGGTGAAGGGGGTGGGTGGGGCGAGGGAAAGGCAGGGGTGTCTGCTTCTTTGAGGTGACATGGGCTGCTTGTTCTGCACCAgattacacacagagacacccatTGCCTTAACTGTTACATAGAAGTAACCCAGGATGATCTTGTTGTGACTGAGAGAAGGCATATTGTTTACAACTGTTAATGTAATGACGGAGTATGTGATCATGTGTAAAGGACATTATGAACATGAAATATCCTGCCTTAGGTGATGTGGATCCTTCACTGTGGATGGTTACAGATTTTAACCATGGAGATTAAGAAGAAAGCTAATAGGGGCCTTATAATACTGGTCTAGATCAGACTGTTGACCCATGTCCAGTGATGGAGAGGGCTCGACTGAGGTGGTCAGGTAGACGAGGCTGCTACATTTAATGGAGGATTGCACTTCTAGATTATTGGCTTGAATGTGATAATAGCGTGACGTGAAAACTACTTTTAACTTTGGAGGGTattcaatcaatcagtcaaatgtatttataaagcccttcttacatcagctgatgtcacaaagggctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctagaaacaactccctagaaaggcaggaacctaggaagaaacctagagaggaaccaggttctgaggggtggccagtcctcttctggctgtgccgagtgtAGATTATAACAGTGCGTTGCCAATATGTTCAACCCCATCCActctgccaaagcacagcccccacaccattagaggtatatcttcaaaccaccaacttactaccctgagacaaggctgagtaaagcccacgaagatctcccccacagtACGAACctgagggg
>TU946449
AAGCAGGCGAGGGACACAAGGACATACCCTCAGGTCAGAGCCCCACGGTCAGCAATGGCTACAGCAATGGCCCCAGCAATGGCTGCCATGATTTCAAAGACAAGTCCGACACAGAGAGCAAAGCAGAGGAGCAGCAGAGCACCGGTGTTACAGCTCCAACCAGCAACTCCAACAACCACCACTTCCTCCCTAACCTTCAGTACGTAGCCCCAGCCCTGCCCAGCAGCCATCGCGACCGCCGTCCAAACCCCAATCCCAGACACGCCCAAGACccagatatagagagggagagagggtacaccgac

Function

NR:

description
zinc finger protein Eos-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616800.2 False 3456 mRNA 0.54 8 65673785 65682112
TU946449 True 305 lncRNA 0.58 1 65675504 65675808

Neighbor

gene id symbol gene type direction distance location
LOC110532706 LOC106572675 coding downstream 37946 65630064 ~ 65635839 (-)
LOC110532689 LOC102781726 coding downstream 53826 65611213 ~ 65619959 (-)
LOC110532688 LOC106572678 coding downstream 68442 65559624 ~ 65605343 (-)
LOC110532687 LOC106572679 coding downstream 114105 65551960 ~ 65559680 (-)
LOC118966093 NA coding downstream 124969 65546704 ~ 65548816 (-)
LOC110532699 acv1b coding upstream 120665 65802777 ~ 65827900 (-)
LOC110532700 LOC106567044 coding upstream 147090 65829202 ~ 65875211 (-)
LOC110532698 LOC106572673 coding upstream 201493 65883605 ~ 65893796 (-)
LOC110532695 LOC106572686 coding upstream 362550 66044660 ~ 66047730 (-)
LOC110532694 LOC106572659 coding upstream 399651 66081763 ~ 66104051 (-)
G832138 NA non-coding downstream 18907 65654673 ~ 65654878 (-)
G832130 NA non-coding downstream 25002 65648549 ~ 65648783 (-)
G832126 NA non-coding downstream 27857 65645656 ~ 65645928 (-)
G832125 LOC106572674 non-coding downstream 28634 65644908 ~ 65645151 (-)
G832111 NA non-coding downstream 39287 65634223 ~ 65634498 (-)
G832333 NA non-coding upstream 729 65682841 ~ 65683041 (-)
G832342 NA non-coding upstream 11404 65693516 ~ 65699698 (-)
G832346 NA non-coding upstream 23152 65705264 ~ 65705564 (-)
G832360 NA non-coding upstream 54239 65736351 ~ 65736581 (-)
G832365 LOC106572671 non-coding upstream 61128 65743240 ~ 65744200 (-)
G832008 NA other downstream 255689 65414495 ~ 65418096 (-)
G831986 NA other downstream 260714 65370853 ~ 65413071 (-)
LOC110532670 hoxc8ab other downstream 960115 64710256 ~ 64713744 (-)
G830543 LOC108255233 other downstream 1632574 64027907 ~ 64041211 (-)
LOC110532632 LOC106572615 other downstream 1774481 63862848 ~ 63899379 (-)
G832392 LOC106572669 other upstream 94471 65776583 ~ 65781798 (-)
G832401 kmt2d other upstream 111745 65793857 ~ 65795190 (-)
G832461 NA other upstream 264070 65946182 ~ 65946593 (-)
G832480 LOC106572660 other upstream 319107 66001219 ~ 66001734 (-)
G832503 NA other upstream 353760 66035872 ~ 66036180 (-)

Expression


Co-expression Network