LOC110532698 (LOC106572673)


Basic Information

Item Value
gene id LOC110532698
gene name LOC106572673
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 65883605 ~ 65893796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021616792.2
gagagcagtccCTCCTGCTCAGCTTCTAGCCAGCCTGTCAGGTGAAATGCTCTCTTTCCGCTGTTTCTTTCCTTCTAATCCTCCTGTAAATCTCCTGTAATCGGGCGAGAGCATGCTGCCTCCTGACAAACTTACAGCTACAGGCTGCCTGCTGCCTGACTTTGCGTTCATTGTCTATGTAAAGACCTGGGAGGAGGATGGTGTGGCGGTGGTGATCTATCGGACAGCCTAGGCACACTGTAAGGAGGAGGTTAGAGCACGTTAGCTGGAGCAGCACGGGTCTGTTGTTGCTGGTACTTAGCCAGACAaacccagaggaacagaggaagagggGATGCATATGCTATTGTCCCAGGAAGACGGAGAAAGGGagtaaacagagggagagagaagaggacaatACCCGCCATTGGATAGACAACCATTTTATGGGAGCAGCTGTGATGTGGTAATCATCAGCAGGGTCCAGGCAGGGTCCTCTCCACATCTCATCCTCCCGTGGGCAGAGGAGGCCTCTTGGTCAGGTGTGATCTCATCCTCCCGTGGGCAGAAGAGGCCTCTTGGTCGGGTGTGATCTCATCCTCCCGTGGGCAGAGGAGGCCTCTTGGTCGGGTGTGATCTCATCCTTTCAGTGGTCCACCTGGTGGTCCAGTGATGGCTCATGCACAAGATGATCCCCAACTAGGCGCTGGCCCGTCCGAGGATTCTGAACTCTCTGAGAATGAGTCCGAAACGGCGAGCTTGGTGTCAGAGGACTCTATCATGCCAGACTATGAGATGGAGCGGGGTAGTGGAGGCACCACCTCTACGCTGTACGAGGCCTGTAACAGGAACGAGGTGCTGACGCTACAGAGGGTCCTGGAGAGGGGGGTTACTAAGGAAGAGGTTATGGAGCTGGACATCAATGGCATGAATGGTCTGATGCTTGCTGTCTCCAGAGGCTATGTGGACATGGTCTACGGTCTACACACTTGTCCACTGATCAACATTAACCATCAGGACAATGAAGGCAACACAGCACTGATGATTGCTGCCCAGGCCGGCTATATCTCCATTCTAAACTTCATCCTGAACTACTACCCTAAGATAGACCTGGAGGTGAGGGACATCCGGGGCTTCACTGCCCTCATCAAGGCAGCCATGCAAGGCAGGGTAGACTGTGTGTCTTCCCTCCTCATGGCCGGTGCAGATATCAATGTAGTGGATGAGGTCCGGGGGAAAAGCATCATGGACTGGGCCCTGAAGACGGGTCGCTTCGAGGTCCTGCAGCGTCTCCGTTTTCTCCAGGCGCACCCCATCGCCGAGCAGTTCTGCGACAGCTACGTGATAGAGTGGCCCGAGCTGAAGGAGCTGGTTGCCAAAGCCATGATCCCCAAAACACTGACTCAACGTCTGAAGGACAGCCTGACCATTAGCTTACCCAAGGACCCTCAGGACAACGGAGTGATGGACCACCTGGTGAAGATGACCACATCCATCCACAGccctctagtctccactggctgCCGGCCCCTCTGCCCCACAAGCCCCCCCGAGCTCGGGAAGAGGCGCCTGGCCGTGCCGGAGCTGATGGAGAAGCACAGCAGTAAGGACCTGGAGGAAAGCTCTGTGTGTCATAGTAACGGTGTGAAATGTTCTTTCAAGCCTGCGCCAGCGTCGTCGAGCCCCTTCTCACTCGCCAACTGCTGCTCGTACGCGGAGTGGAGGGATAGTATTCTCTCGATGGCTGCCAGCGGCGTCCGTAACTTCATCCCTTGTTCCATGGCCCACCGGAACTCTGTATTCCCGTCTAGTTGCATCCCCAAGATCACCTTCACCAAGTCTCAAGACAAAACACCCAAGAAGGCGAAGAAGGCGAAGAGGCACAAGGGCCACCTGGAGCCTCCGGTCTGGAAGTACAAGGCAGAGAAGCAggagaagaaaaaggaaaaggaAAAGTTGGAGGAAGAGAAGCAAGCGCAAGAGAAGGCACTTAAGAAAGCTAAGAAGAAGGCAGCCAAGGTGGCGGCCAAGTCAAAGGAGCCTGCCAAGGCAAGTTAAACTGCTGTCTGTAAAGTGCCACAGAGTGGGAGCACAGAACTCTGGGAAAATAGAGCGACCTCTGTGCTGTCATCAGAcggaagaggaagcgagacacCCCACTCGCAGTTTTGTTTACTGATTGAATGAAAGTCAATGAACTtagtagaccagacccagctgctattgcATTGGTGTCCATGGGAGACCCACCCCTGTTAAGTAGACCATTTTTTTCAATGATAAACGGCCTGAGAGAATCTtgatttatccaccatctttgctgTCATCTCCTACTAACTCCATTGTATCCACTGTGATGATGTCATATAAGACGGACAAGGGGACGGCTCCCCTGTGGTGGCACCTGCCTGGGGTCATCATGGAGGCTCAGTTGCAGCCCTACCTTGGGGCCTCTAATAACATGGGTGGAAACTAGCATCTGAGCCGGACCAAGTCTAATGGATGGACTGTTGTTTTTCCTCTCTGCTGGGATATGCGGCTGTAAGGACTGCAATGGCCTGGACATTCCTAGACATTATTATTAATGTATCTTTCATGTGGAATTCTCTTTTTCTGTTTTAAATTATtttgttgatttatttatttttgagagTTCAGATGTTAAAAAGATCAGTAGAGTTTGTTTGGTCTTCCATGTTTATAGCTAACCAATCGAAACTGTGAAGGAACCAGAGCCATAGCAAATAAATCTCTAGTTTCTGATAAGCAAGGTACTTCCTGAAAAAGAAACAGGACATTAACATGAGTTAGGCAAATGATTAGGGAGGATTATGAACAAGGTTTCAGAGTTGCCTGTTTGATAAACCTCATGGTCAGATATAGCACAACCAGACCTGGGGTCAAATACAATTTGAAAGCATTTCAAATGTTTCAGCTGTGCTTGAGAGAGCTTGCCTGTTGATATGGAAACAATATaaaagtcccaaaagtgcaaaccacaCCCAACTGGCACTCCAGGCAAGCTAAAGCAAACGCTGAATGTTTTTGTAAGATTTTGAATAGTatatgaacccaggtctgaccACAACGCACATCTGAGTTCCAATCTGCTCTGTGCTTTGTTTTCCTATGTACTCCAATTAGCTGTCTTCCGAAAGAAGTCGATTTTTCACTGTTACCGGTGAGAGGACTTTTGACTTTTATCAAGAGTAGTAATACAATATCAGGGATCCCCTCAGTTTTGATGAGGCTCAGGTATTTAAAGATAAACCTGAGTGGCTTATTATTACGTTGCACAAACCTGCTCAGTTAGAATAAATTGTTTGTTGATCCAGTTCACATGTTGTGATGGAGCTGAAATGTGAAGTATGTTATTCAGTAGGAATCCACTTCTGTCCTAATAGTATGTGATGGTTATTTTTAAATAACACCATCATCCTCGTCAAGGATCCAGAAAATCGTATGTGTAGTGGCTTTTGCCAGTCAAAAACCATTGATGTGTCAGATACGGCTCCTACAATATGAAAAGATACAACAGGCCTAATGAATATTCTATTACAAAACCAAACATTAAAACGTTTAAAAACACAACATCCATGTGACTTAGTGATGATCCTTCTTCCCCCTATATCCGATAGATTTAGCAGCTTTGGCTATAGGCTAAGCTGGGTTAGTGTGTGAGCTCAGTGAGCTTGTTAACTGGTGCTATTATAGTCACAGTCAGATCAGACAATAACCATGTAGCCTAACCATAGATATAGCTGTAACCATGGGGTGTAACCATACAACCTAACAATAAATACGTCTGTAACCATGGGGCGTAACCATACAACATAACCATAGATACGTCTGTAACCATGGGGTGTAACCATACAGCCTAACTATACAgtactttcagaaagtattcacaccccttgaatttgTCCACATTTTTTtggtgttacaaagtgggattcaaatgtatttaatagtaaaattttttgtcaac

Function

NR:

description
ankyrin repeat domain-containing protein 33B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021616792.2 True 3970 mRNA 0.48 6 65883605 65893796

Neighbor

gene id symbol gene type direction distance location
LOC110532700 LOC106567044 coding downstream 8394 65829202 ~ 65875211 (-)
LOC110532699 acv1b coding downstream 55705 65802777 ~ 65827900 (-)
LOC110532704 LOC106592425 coding downstream 201493 65673785 ~ 65682112 (-)
LOC110532706 LOC106572675 coding downstream 247766 65630064 ~ 65635839 (-)
LOC110532689 LOC102781726 coding downstream 263646 65611213 ~ 65619959 (-)
LOC110532695 LOC106572686 coding upstream 150866 66044660 ~ 66047730 (-)
LOC110532694 LOC106572659 coding upstream 187967 66081763 ~ 66104051 (-)
LOC110532692 LOC106572690 coding upstream 234120 66127916 ~ 66147685 (-)
LOC110531240 LOC106567037 coding upstream 334661 66228457 ~ 66430917 (-)
LOC118966098 LOC106567034 coding upstream 628866 66522662 ~ 66543277 (-)
G832357 NA non-coding downstream 82758 65798939 ~ 65800847 (-)
G832396 NA non-coding downstream 94438 65788491 ~ 65789167 (-)
G832372 NA non-coding downstream 130941 65752451 ~ 65752664 (-)
G832369 LOC106572671 non-coding downstream 134129 65749076 ~ 65749476 (-)
G832368 NA non-coding downstream 134555 65748731 ~ 65749050 (-)
G832458 NA non-coding upstream 42624 65936420 ~ 65936806 (-)
G832462 NA non-coding upstream 53722 65947518 ~ 65947761 (-)
G832467 NA non-coding upstream 73056 65966852 ~ 65967113 (-)
G832469 NA non-coding upstream 80456 65974252 ~ 65974699 (-)
G832479 NA non-coding upstream 104012 65997808 ~ 65998029 (-)
G832401 kmt2d other downstream 88415 65793857 ~ 65795190 (-)
G832392 LOC106572669 other downstream 101807 65776583 ~ 65781798 (-)
G832008 NA other downstream 465509 65414495 ~ 65418096 (-)
G831986 NA other downstream 470534 65370853 ~ 65413071 (-)
LOC110532670 hoxc8ab other downstream 1169935 64710256 ~ 64713744 (-)
G832461 NA other upstream 52386 65946182 ~ 65946593 (-)
G832480 LOC106572660 other upstream 107423 66001219 ~ 66001734 (-)
G832503 NA other upstream 142076 66035872 ~ 66036180 (-)

Expression


Co-expression Network