LOC118966098 (LOC106567034)


Basic Information

Item Value
gene id LOC118966098
gene name LOC106567034
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 66522662 ~ 66543277 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988732.1
AACTACAACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACGACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACGACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAAGACTAACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACGACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACGACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAAGACTAACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACGACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAACTACAACATAGAGTTGTCTGAACACTGACTGCAGGTTTTAAAGAGTGAAATCCTGCTCCCTCCCCATCCCTTTCCCTtcatcatccccctctctcctgttgttcctctcttcccttctctccgtCTGCCATCTTCCTTTTCTCTCCCACATTCTACTCATGTTGTCTCAACGGACCCTTCTCTCTTGGCTGCTGACACCTGTTGACCTAGTCTGAAAGCACCACAGACATACAGCAACCAAACCTCTCCATACCTTCTTTCCAGTCTTTCCTATTCTGTCTATCTATAGTCCACCCTGGCACCCGGCACTATTCCGTCTAAGGGGGAGGAGGACTTTCTGACCCTGGCCGCTTCTCGGTTCAGCCGTCGGAAGCGTGCCATCGGAGCCGCCATGGGCGTGGCCATGGTTCTACTCCTCCTGATAGCCATCCCCCTATTAGTTCACACCATGAAAGGGGGAGGAGCTAGCCAAGGAAGTGGCGGTGAGGGGACCCATTATGAGATGCTGGGGAGCTGCAGAATGGTCTGTGACACATATAGTACTGCCCAACCAGGCCAGGAGCTGACAGCCATGTCCCCTCAACCGGAATACCCCGGGCGGAAGAAAACGGGGTACCGCGGGGTCCCTGGGATCCCTGGTCCTCCAGGCGCCCGAGGACCCCCTGGGGAATCAGGCAAGCCAGGGCCACAGGGGCCTCCCGGCCCTGGACCTAACGGTTACTTCCCCTCCTACAGCCCCAAAATCGCCTTTTATGCAGGGCTAAGGAAACAGCACGAGGGCAGCGAGGTGTTGAAGTTTGATGATGTGGTAACCAATGTAGGGAACTACTATGAGCCAAGTACTGGGAAGTTCACCTGTCCTCTACCTGGTATCTACTTCTTCACCTACCATGTTCTGATGAGGGGCGGAGATGGGACCAGCATGTGGGCTGACCTGAAGAAGAACggacaggtgAGGGCCAGTGCCATCGCCCAGGATGCGGACCAGAACTATGACTATGCGTCTAACAGTGTGATCCTGCATCTAGACGTGGGGGACGAGGTGTGTGTACAGCTGGACGGGGGGAAGGTCCATGGAGGAAACACCAACAAATACAGCACATTCTCTGGGTTCCTCATCtaccctgactgactgactgaattgaCCAACTTGACCgactggactgactgaccttCACAACTTTAAAAAGACAAGAGAGGCTGTGGGTGGACTGCAGGAGCTGAAGGcaacacagacagatacagacaaacacacacacacacacatacacacatatacacacacatacacacacaaacagtgcacacaaacatacataaaAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K23284 C1QL; C1q-related factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988732.1 True 1788 mRNA 0.50 3 66522662 66543277

Neighbor

gene id symbol gene type direction distance location
LOC110531240 LOC106567037 coding downstream 91745 66228457 ~ 66430917 (-)
LOC110532692 LOC106572690 coding downstream 375045 66127916 ~ 66147685 (-)
LOC110532694 LOC106572659 coding downstream 418611 66081763 ~ 66104051 (-)
LOC110532695 LOC106572686 coding downstream 474932 66044660 ~ 66047730 (-)
LOC110532698 LOC106572673 coding downstream 628866 65883605 ~ 65893796 (-)
LOC110532712 NA coding upstream 43332 66586609 ~ 66589365 (-)
LOC110531241 LOC106572714 coding upstream 53923 66597200 ~ 66619536 (-)
l1cama LOC106572712 coding upstream 84643 66627920 ~ 66751125 (-)
LOC110531242 LOC100380641 coding upstream 256764 66800041 ~ 66888485 (-)
LOC110532714 LOC106572710 coding upstream 351403 66889894 ~ 66928852 (-)
G832991 myl6b non-coding downstream 6663 66506278 ~ 66515999 (-)
G832987 NA non-coding downstream 19326 66502741 ~ 66503336 (-)
G832982 NA non-coding downstream 25991 66496395 ~ 66496671 (-)
G832855 NA non-coding downstream 32369 66490049 ~ 66490293 (-)
G832836 NA non-coding downstream 54096 66468309 ~ 66468566 (-)
G833015 NA non-coding upstream 11776 66555053 ~ 66560056 (-)
G833073 NA non-coding upstream 177508 66720785 ~ 66737749 (-)
G833074 NA non-coding upstream 178684 66721961 ~ 66723198 (-)
G833076 NA non-coding upstream 181266 66724543 ~ 66724907 (-)
G833091 NA non-coding upstream 206284 66749561 ~ 66749848 (-)
G832503 NA other downstream 486482 66035872 ~ 66036180 (-)
G832480 LOC106572660 other downstream 520928 66001219 ~ 66001734 (-)
G833029 NA other upstream 44135 66587412 ~ 66588680 (-)
G833521 NA other upstream 635972 67179249 ~ 67185243 (-)
LOC110531246 LOC106572701 other upstream 905174 67327762 ~ 67455661 (-)
LOC110532727 LOC106572699 other upstream 999873 67543067 ~ 67560577 (-)
LOC110531249 LOC106572727 other upstream 1485131 68028408 ~ 68079899 (-)

Expression


Co-expression Network