LOC110532716 (LOC106572708)


Basic Information

Item Value
gene id LOC110532716
gene name LOC106572708
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67028029 ~ 67042094 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988771.1
GAAAAGATTACAAAATGATATAGTAAACTGATTTATGAACAGCTCGAGCTCTAATGTGGCAATATTATTCCATAGAATTGGGAATTAGAATACCAGTAATTATTAGTAATTTAATAATACAATAATGTTATAATAGGACCTCTATCGATTCTTCTCTCTGTATCGTGGGCACGAGCAGATGCGCGTTAACGGCATTAGTCGGATTCCGTTAAGATGGCCGCCTCCAGTGCAGTGATATCAATGTCCAAAATCATTCAACCCATTTGGGGTGGACGGTTGGCAACGACAGCAAAAGTATTTGGAGCCACAGTGAGCAGTCGCAGAGAGAAGTCAACAGTAGGACAAATCATTCCCCCTCCTGCGAAGTATGGTGGCAGACACACTGTAACTCTGATACCTGGAGATGGTATTGGACCAGAACTGCTCAATCACGTAAAGGAGCTCTTCAGGTTCAGCTGTGTACCTGTGGACTTTGAGGTCGTGAATGTCAGCTCAGCTACCGAGGATGACATCAACAACGCCATCACAGCCATCCGCCGTAACGGAGTGGCCCTCAAAGgtAACATTGAGACCCTCCACACCCTGCCTGCTTCCCACAAGTCCAGAAACAATCTCCTCCGCACCAGTCTGGACCTGTATGCCAACGTCATGCACTGTAAATCCCTCCCTGGAGTTCAGACTCGCCACAACAACATTGACATCATGATCATCAGGGAGAACACTGAGGGAGAGTACAGCAGTCTGGAGCATGAGAGTGTATCAGGGGTGGTGGAGTGTCTCAAGATCATCACCCGGACTAACTCCCTGAGAATTGCTGAGTATGCCTTTAAATTGGCCCGGGAGAAAGGTCGCAAGAGGGTCACTGCAGTTCACAAGGCCAACATCatGAAGCTGGGAGATGGTCTGTTCCTGCAGTGCTGTCGAGAGGTGGCTGCTGGATACCCTGACATTGCCTTCGATGCCATGATAGTCGACAACACCACCATGCAGGCCACCAGGAACACAGGGAAGAGTATTGCTGACAGGAACATTGCTAACCCCACTGCCATGCTACTGGCCAGCTGCATGATGCTAGATCACCTCAAGCTCCACGATTATGCCACTATGATCAGGAATGCAGTCCTTACGACCATGAACGAGACTCAGTTGCACACAGCTGACATCGGGGGGCAGGGCACCACCTCTGAGGTGGTTCAGGCGATCATGAGAAACATCCAGAGCAAGGGGCCTCTCACCAGCGAGCTCTGAACACGCATTTCGACCACACACATCAAGTCAATGCTGTTGGATAACATACAAATCCTTGGTGTGTCTCGTATATTTGACCAACTGTGTGCCGTATGAGAGAGTGggcgtgtgtttgtgcatgtttaTTTCCATAGTAATGCGCCTCCGTTGAGCGGTTCAGTcttgcctgtaaacacacacacaccatgcacacacacacacaccatgcacacacacaccatgcacacacacacacacacacacacaccacaca
>XM_036988770.1
TATAGTAAACTGATTTATGAACAGCTCGAGCTCTAATGTGGCAATATTATTCCATAGAATTGGGAATTAGAATACCAGTAATTATTAGTAATTTAATAATACAATAATGTTATAATAGGACCTCTATCGATTCTTCTCTCTGTATCGTGGGCACGAGCAGATGCGCGTTAACGGCATTAGTCGGATTCCGTTAAGATGGCCGCCTCCAGTGCAGTGATATCAATGTCCAAAATCATTCAACCCATTTGGGGTGGACGGTTGGCAACGACAGCAAAAGTATTTGGAGCCACAGTGAGCAGTCGCAGAGAGAAGTCAACAGTAGGACAAATCATTCCCCCTCCTGCGAAGTATGGTGGCAGACACACTGTAACTCTGATACCTGGAGATGGTATTGGACCAGAACTGCTCAATCACGTAAAGGAGCTCTTCAGGTTCAGCTGTGTACCTGTGGACTTTGAGGTCGTGAATGTCAGCTCAGCTACCGAGGATGACATCAACAACGCCATCACAGCCATCCGCCGTAACGGAGTGGCCCTCAAAGgtAACATTGAGACCCTCCACACCCTGCCTGCTTCCCACAAGTCCAGAAACAATCTCCTCCGCACCAGTCTGGACCTGTATGCCAACGTCATGCACTGTAAATCCCTCCCTGGAGTTCAGACTCGCCACAACAACATTGACATCATGATCATCAGGGAGAACACTGAGGGAGAGTACAGCAGTCTGGAGCATGAGAGTGTATCAGGGGTGGTGGAGTGTCTCAAGATCATCACCCGGACTAACTCCCTGAGAATTGCTGAGTATGCCTTTAAATTGGCCCGGGAGAAAGGTCGCAAGAGGGTCACTGCAGTTCACAAGGCCAACATCatGAAGCTGGGAGATGGTCTGTTCCTGCAGTGCTGTCGAGAGGTGGCTGCTGGATACCCTGACATTGCCTTCGATGCCATGATAGTCGACAACACCACCATGCAGCTAGTGTCTAAGCCCCAGCAGTTTGACGTTATGGTGATGCCCAACCTGTATGGTAATGTGGTTAGCAATGTGTGTGCTGGCCTGGTGGGAGGACCAGGGCTGGTGCCAGGGGCCAACTATGGCCGTGACTATGCTGTCTTCGAAACGGCCACCAGGAACACAGGGAAGAGTATTGCTGACAGGAACATTGCTAACCCCACTGCCATGCTACTGGCCAGCTGCATGATGCTAGATCACCTCAAGCTCCACGATTATGCCACTATGATCAGGAATGCAGTCCTTACGACCATGAACGAGACTCAGTTGCACACAGCTGACATCGGGGGGCAGGGCACCACCTCTGAGGTGGTTCAGGCGATCATGAGAAACATCCAGAGCAAGGGGCCTCTCACCAGCGAGCTCTGAACACGCATTTCGACCACACACATCAAGTCAATGCTGTTGGATAACATACAAATCCTTGGTGTGTCTCGTATATTTGACCAACTGTGTGCCGTATGAGAGAGTGggcgtgtgtttgtgcatgtttaTTTCCATAGTAATGCGCCTCCGTTGAGCGGTTCAGTcttgcctgtaaacacacacacaccatgcacacacacacacaccatgcacacacacaccatgcacacacacacacacacacacacaccacacaccatgcacacacacacacc

Function

NR:

description
isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like

GO: NA

KEGG:

id description
K00030 IDH3; isocitrate dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988771.1 False 1501 mRNA 0.49 12 67028029 67042075
XM_036988770.1 True 1649 mRNA 0.50 13 67028047 67042094

Neighbor

gene id symbol gene type direction distance location
LOC118966099 NA coding upstream 402204 66615300 ~ 66628653 (+)
LOC110532711 LOC106572715 coding upstream 434444 66582815 ~ 66593585 (+)
LOC110532709 myl6b coding upstream 512027 66506476 ~ 66516002 (+)
LOC118965939 NA coding upstream 545650 66481679 ~ 66482379 (+)
LOC110532708 LOC106572691 coding upstream 546485 66478086 ~ 66481544 (+)
LOC110532719 ssrd coding downstream 3103 67045197 ~ 67049885 (+)
LOC110532722 LOC106572704 coding downstream 221470 67263564 ~ 67278303 (+)
LOC110532726 LOC106572718 coding downstream 438258 67480352 ~ 67580588 (+)
LOC110532729 LOC106572697 coding downstream 565579 67607673 ~ 67618114 (+)
tebp tebp coding downstream 580329 67622423 ~ 67625977 (+)
G833271 NA non-coding upstream 6102 67020357 ~ 67021927 (+)
G833240 LOC100846954 non-coding upstream 96670 66929691 ~ 66931359 (+)
G833239 LOC106572710 non-coding upstream 100932 66926578 ~ 66927097 (+)
G833230 NA non-coding upstream 106235 66921002 ~ 66921794 (+)
G833142 NA non-coding upstream 234444 66793266 ~ 66793585 (+)
G833307 NA non-coding downstream 24649 67066743 ~ 67067594 (+)
G833311 NA non-coding downstream 34038 67076132 ~ 67080003 (+)
G833335 NA non-coding downstream 78998 67121092 ~ 67121455 (+)
G833471 NA non-coding downstream 95264 67137358 ~ 67137840 (+)
G833487 NA non-coding downstream 109564 67151658 ~ 67152037 (+)
G833241 LOC106572720 other upstream 93542 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 206390 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 268356 66759278 ~ 66759673 (+)
LOC110532701 LOC106572669 other upstream 1227198 65754497 ~ 65801814 (+)
LOC110532705 LOC106567051 other upstream 1356546 65669353 ~ 65671483 (+)
G833541 NA other downstream 171326 67213420 ~ 67213884 (+)
G833906 LOC100194703 other downstream 578784 67620878 ~ 67621366 (+)
G834099 NA other downstream 1006819 68048913 ~ 68049222 (+)
fance fance other downstream 1174984 68213202 ~ 68218960 (+)
G834228 NA other downstream 1225943 68268037 ~ 68268408 (+)

Expression


Co-expression Network