XLOC_026767 (rasd2)


Basic Information

Item Value
gene id XLOC_026767
gene name rasd2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 50175166 ~ 50177658 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052095
ACTGAGGGGTACGAGCAGCTGATCCCCTGCACCGCAGACTAGCACCAGCCGTTCTGGATGATACCAGCCGGGAGCATGGAGGTGAATGCAACTGATAAAGCTTTCCTTTCAGTTGATGGCACCGCGACACTCACTAGTTGTAGCTATCATTCCGCCACAGTTGATGCGTCTTTGCAATGCACGCATCCAGAGTCCAAGGCGCGGGTGGTACGCTCCTCCAGCACTGGAAAGCGACCCTCCTCGTCTGAACGCAAACCCCGGAGATCTCTAGACCCTCTCTctcagctgcataaaacaaagcATATGAGATATGAGGTTAAGAATGACGAGCTGGTGAGCGTGAAACCCAGTCATTACCGGCGTGTAGTAGTGCTTGGCGCGCCCCGAGTGGGGAAAACAGCGCTGATACGCCGCTTCTTAGGTGAAGAAGTGTTCGAGGAACATTACGAGCCAACAAGCGAAGACTTTCACAGCAAACTGTACCACATCCGAGGAGAAAGATACCAGCTAGACATCCTGGACGCGTCCAAAGAGAGAGACTTTCCTGCCAAACGAAGACTGACTATTTTAACTGGTGACATCTTCCTGCTGGTGTTCAGCGTGACTGACCGAGACTCTTTCACAGAGGTTTGCTCATTACGCGAGGAGATTTTCACAGCCAAATCCAAGTTGACCAAATCCAAAGAAAACAGACAGCTTCCAATAATAATCTGCGCCAATAAAGCAGACGTGGACTCCCCGAGAGCTGTGCAGCGCTCAGATGTCGCCCAGTGTCTCGGGGAGGACAGTGTCCTTTTTGAGGTGTCCGCAAAAACCTGCACCAACCTTGAGGAGATGTTTGAGACCCTGGCGGTTCTGGGAGGCCTTCCGACAGAAACCAGACCCTCTCTACATCGAGACATCTCTATCCACACGTACCACGCCCTGAGCAGCAGAAAGAGAAACAAGCGCGCCGTGAACGAACCGTGTGGAGCCGTGCACCCGCTCGCGCGCAGACCGAGCTTCAGCAGTGACTTACGTCGCGTCCTGGGTCCGAGCACCCCGAAAAAGAGCACACCAATTGAGAGGTGTCAGATACAGTAAAAGAGTCACACTAGGGACTCTGATTCAGAcctatgaataataattattcacCTATGTAAGAATTATTAAATTCTACATGTCCCTGGCTGGACCAGAGGACAGATAATGCTAAGTACTATTTATGAAATGTTTTGATGGAAAATCAGGCTCGAGATAGCTGGTTTAAACTGGTCATTAGCTGGTGTAACCCAACTTGTGAATCAGCAACAAACTACGTCATCGTAAAAAGGTTATTTTAACCATATACCTCATTCAACCTATAATGAGCTTTACTGGTATACATGGATGTATAGGTTGATtgttatgtaaaatatttttacacaaataaaacTATTTCATGAAGATGTCTCCATACTCATTTAAGTGGTGGTTGCTttaaaaaactaacaaattaaaGTGACAGTTGATTATATGtgtttgatttttaattgtttattattttaataattttaatactaGTTTTGGGTAGATTGTTTAATCAACAAAAACAAGAGTTCTGAATTGAATAAAACCACTTAATATCGCTGAttgtttttgttaacatttaagtgactttaaatagCTATATCAAATGATGCATGCCTTTTTATTGCACTGGTTGATTTAGTGACcataatttagcttacctaaaTACTGTTTTTGTCTTGATCTTTCCACTTACCATAAAATTGATAACTCTCATTTATTAGCTATTTATACTTTTATCCTAAAATGAGATTTGCTGAGTGTCTGGTCAACCAGTTACAAACTAGTTTGGACAAACTTAAATGGCTTCAATTCTTTTCAGCAAAGAAATGTTAAAAAGTAAgcgcttgtgtgtgttttctttacatttaatgtATTACCTCTAATTTGTTTACACGTTTCTTAGCTATACTAGCTAAAACTTCAATAAAATATGCTTCTGTTACTTGATATTGAACATACATTACCTCATTTTCGTTTCCAGTTGTTTTGTATCACTGACAATAAAATATTCGTGTCTCAAGAAA

Function

symbol description
rasd2 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Orthologous to human RASD2 (RASD family member 2).

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
ko04031 GTP-binding proteins

ZFIN:

id description
ZDB-GENE-050913-57 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Orthologous to human RASD2 (RASD family member 2).

Ensembl:

ensembl_id ENSDARG00000052222

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052095 True 2075 mRNA 0.42 2 50175166 50177658

Neighbor

gene id symbol gene type direction distance location
XLOC_026766 btr02 coding downstream 28006 50127726 ~ 50147160 (-)
XLOC_026765 cldnk coding downstream 47498 50123507 ~ 50127668 (-)
XLOC_026764 hgs coding downstream 57026 50076793 ~ 50118140 (-)
XLOC_026763 mrpl12 coding downstream 108638 50054187 ~ 50066528 (-)
XLOC_026762 si:ch1073-100f3.2 coding downstream 129162 50032394 ~ 50046004 (-)
XLOC_026768 arl16 coding upstream 94304 50271962 ~ 50277959 (-)
XLOC_026769 NA coding upstream 161122 50338780 ~ 50341046 (-)
XLOC_026770 NA coding upstream 255893 50433551 ~ 50438278 (-)
XLOC_026771 NA coding upstream 256135 50433793 ~ 50434423 (-)
XLOC_026772 rcvrna coding upstream 263786 50441444 ~ 50443607 (-)
XLOC_026761 NA non-coding downstream 237431 49934636 ~ 49937735 (-)
XLOC_026754 NA non-coding downstream 756821 49406158 ~ 49418345 (-)
XLOC_026752 NA non-coding downstream 802490 49186398 ~ 49372676 (-)
XLOC_026748 BX784040.1 non-coding downstream 1097287 49077762 ~ 49077879 (-)
XLOC_026747 NA non-coding downstream 1138384 49023900 ~ 49036782 (-)
XLOC_026773 CR812464.1 non-coding upstream 551201 50728859 ~ 50749116 (-)
XLOC_026777 NA non-coding upstream 1082173 51259831 ~ 51273723 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01060242_00002116_00003236 NA coding CI01060242 null 2031 ~ 3970 (+)